Human Peptidoglycan Recognition Protein-L Is an N-Acetylmuramoyl-L-alanine Amidase*

Peptidoglycan recognition proteins (PGRPs) are pattern recognition molecules coded by up to 13 genes in insects and 4 genes in mammals. In insects PGRPs activate antimicrobial pathways in the hemolymph and cells, or are peptidoglycan (PGN)-lytic amidases. In mammals one PGRP is an antibacterial neutrophil protein. We report that human PGRP-L is a Zn2+-dependent N-acetylmuramoyl-l-alanine amidase (EC 3.5.1.28), an enzyme that hydrolyzes the amide bond between MurNAc and l-Ala of bacterial PGN. The minimum PGN fragment hydrolyzed by PGRP-L is MurNAc-tripeptide. PGRP-L has no direct bacteriolytic activity. The other members of the human PGRP family, PGRP-Iα, PGRP-Iβ, and PGRP-S, do not have the amidase activity. The C-terminal region of PGRP-L, homologous to bacteriophage and bacterial amidases, is required and sufficient for the amidase activity of PGRP-L, although its activity (in the N-terminal Δ1–343 deletion mutant) is reduced. The Zn2+ binding amino acids (conserved in PGRP-L and T7 amidase) and Cys-419 (not conserved in T7 amidase) are required for the amidase activity of PGRP-L, whereas three other amino acids, needed for the activity of T7 amidase, are not required for the activity of PGRP-L. These amino acids, although required, are not sufficient for the amidase activity, because changing them to the “active” configuration does not convert PGRP-S into an active amidase. In conclusion, human PGRP-L is an N-acetylmuramoyl-l-alanine amidase and this function is conserved in prokaryotes, insects, and mammals.

[1]  Xiaodong Cheng,et al.  The structure of bacteriophage T7 lysozyme, a zinc amidase and an inhibitor of T7 RNA polymerase. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[2]  J. Hoffmann,et al.  Drosophila innate immunity: an evolutionary perspective , 2002, Nature Immunology.

[3]  R. Debets,et al.  Inflammatory properties of peptidoglycan are decreased after degradation by human N-acetylmuramyl-L-alanine amidase. , 1997, European cytokine network.

[4]  R. Dziarski,et al.  Defect in neutrophil killing and increased susceptibility to infection with nonpathogenic gram-positive bacteria in peptidoglycan recognition protein-S (PGRP-S)-deficient mice. , 2003, Blood.

[5]  J. V. van Dongen,et al.  Expression and intracellular localization of the human N-acetylmuramyl-L-alanine amidase, a bacterial cell wall-degrading enzyme. , 1997, Blood.

[6]  S. Foster,et al.  Host Recognition of Bacterial Muramyl Dipeptide Mediated through NOD2 , 2003, The Journal of Biological Chemistry.

[7]  B. Lemaître,et al.  The Drosophila immune system detects bacteria through specific peptidoglycan recognition , 2003, Nature Immunology.

[8]  M. Chamaillard,et al.  Nod2 Is a General Sensor of Peptidoglycan through Muramyl Dipeptide (MDP) Detection* , 2003, The Journal of Biological Chemistry.

[9]  C. Vinson,et al.  Bacterial Peptidoglycan Induces CD14-dependent Activation of Transcription Factors CREB/ATF and AP-1* , 1999, The Journal of Biological Chemistry.

[10]  R. Tapping,et al.  Binding of Bacterial Peptidoglycan to CD14* , 1998, The Journal of Biological Chemistry.

[11]  E. Lederer,et al.  Minimal structural requirements for adjuvant activity of bacterial peptidoglycan derivatives. , 1974, Biochemical and biophysical research communications.

[12]  B. Oh,et al.  Crystal structure of peptidoglycan recognition protein LB from Drosophila melanogaster , 2003, Nature Immunology.

[13]  K. Anderson,et al.  Requirement for a Peptidoglycan Recognition Protein (PGRP) in Relish Activation and Antibacterial Immune Responses in Drosophila , 2002, Science.

[14]  K. Schleifer,et al.  Peptidoglycan types of bacterial cell walls and their taxonomic implications , 1972, Bacteriological reviews.

[15]  M. Belvin,et al.  The Drosophila immune response against Gram-negative bacteria is mediated by a peptidoglycan recognition protein , 2002, Nature.

[16]  P. Mellroth,et al.  A Scavenger Function for a DrosophilaPeptidoglycan Recognition Protein* , 2003, The Journal of Biological Chemistry.

[17]  R. Dziarski,et al.  Isolation of peptidoglycan and soluble peptidoglycan fragments. , 1994, Methods in enzymology.

[18]  M. Perutz,et al.  Structure and function of haemoglobin Barcelona Asp FG1(94)β → His , 1983 .

[19]  N. Sharon,et al.  The binding of oligosaccharides containing N-acetylglucosamine and N-acetylmuramic acid to lysozyme. The specificity of binding subsites. , 1967, The Journal of biological chemistry.

[20]  M. Melief,et al.  Purification and characterization of N-acetylmuramyl-L-alanine amidase from human plasma using monoclonal antibodies. , 1996, Biochimica et biophysica acta.

[21]  M. Rämet,et al.  Functional genomic analysis of phagocytosis and identification of a Drosophila receptor for E. coli , 2002, Nature.

[22]  R. Dziarski,et al.  Mammalian Peptidoglycan Recognition Protein Binds Peptidoglycan with High Affinity, Is Expressed in Neutrophils, and Inhibits Bacterial Growth* , 2000, The Journal of Biological Chemistry.

[23]  R. Dziarski,et al.  The Bacterial Cell: Peptidoglycan , 2002 .

[24]  R. Dziarski Recognition of bacterial peptidoglycan by the innate immune system , 2003, Cellular and Molecular Life Sciences CMLS.

[25]  F C Kafatos,et al.  Phylogenetic perspectives in innate immunity. , 1999, Science.

[26]  D. Hultmark,et al.  A family of peptidoglycan recognition proteins in the fruit fly Drosophila melanogaster. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[27]  T. Graf,et al.  Increased inflammation in lysozyme M-deficient mice in response to Micrococcus luteus and its peptidoglycan. , 2003, Blood.

[28]  M. Selsted,et al.  Isolation, Characterization, and Antimicrobial Properties of Bovine Oligosaccharide-binding Protein , 2002, The Journal of Biological Chemistry.

[29]  H. Steiner,et al.  A peptidoglycan recognition protein in innate immunity conserved from insects to humans. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[30]  J. Strominger,et al.  Mechanisms of Enzymatic Bacteriolysis , 1967 .

[31]  J. Tomašić,et al.  The metabolic fate of 14C-labeled immunoadjuvant peptidoglycan monomer. II. In vitro studies. , 1981, Biochimica et biophysica acta.

[32]  R. Wattiez,et al.  Characterization of human serum N-acetylmuramyl-L-alanine amidase purified by affinity chromatography. , 1995, Protein Expression and Purification.

[33]  D. Gigot,et al.  Purification and characterization of N-acetylmuramoyl-L-alanine amidase from human serum. , 1990, Biochimica et biophysica acta.

[34]  E. Birney,et al.  Immunity-Related Genes and Gene Families in Anopheles gambiae , 2002, Science.

[35]  V. Braun,et al.  Murein hydrolase (N-acetyl-muramyl-l-alanine amidase) in human serum , 1984, Archives of Microbiology.

[36]  D. Hultmark,et al.  Functional Diversity of the Drosophila PGRP-LC Gene Cluster in the Response to Lipopolysaccharide and Peptidoglycan* , 2003, Journal of Biological Chemistry.

[37]  H. Steiner,et al.  A mammalian peptidoglycan recognition protein with N-acetylmuramoyl-L-alanine amidase activity. , 2003, Biochemical and biophysical research communications.

[38]  S. Kusumoto,et al.  Chemical Synthesis of N-Acetylmuramyl Peptides with Partial Structures of Bacterial Cell Wall and Their Analogs in Relation to Immunoadjuvant Activities , 1976 .

[39]  H. Langen,et al.  Digestion of Streptococcus pneumoniae Cell Walls with Its Major Peptidoglycan Hydrolase Releases Branched Stem Peptides Carrying Proinflammatory Activity* , 1999, The Journal of Biological Chemistry.

[40]  G. Georgiev,et al.  The differentially spliced mouse tagL gene, homolog of tag7/PGRP gene family in mammals and Drosophila, can recognize Gram-positive and Gram-negative bacterial cell wall independently of T phage lysozyme homology domain. , 2003, Journal of molecular biology.

[41]  D. Gage,et al.  Structural characterization of peptidoglycan muropeptides by matrix-assisted laser desorption ionization mass spectrometry and postsource decay analysis. , 1997, Analytical biochemistry.

[42]  A. Ulmer,et al.  Interactions of CD14 with components of gram-positive bacteria. , 2000, Chemical immunology.

[43]  J. Tomašić,et al.  Partial purification and characterization of N-acetylmuramyl-L-alanine amidase from human and mouse serum. , 1982, Biochimica et biophysica acta.

[44]  M. Ashida,et al.  Purification of a Peptidoglycan Recognition Protein from Hemolymph of the Silkworm, Bombyx mori* , 1996, The Journal of Biological Chemistry.

[45]  R. Dziarski,et al.  Peptidoglycan Recognition Proteins , 2001, The Journal of Biological Chemistry.

[46]  C. Janeway,et al.  Innate immune recognition. , 2002, Annual review of immunology.

[47]  T. Michel,et al.  Drosophila Toll is activated by Gram-positive bacteria through a circulating peptidoglycan recognition protein , 2001, Nature.

[48]  S. Akira,et al.  Toll-like receptors control activation of adaptive immune responses , 2001, Nature Immunology.

[49]  J. Bertin,et al.  Nod1 Detects a Unique Muropeptide from Gram-Negative Bacterial Peptidoglycan , 2003, Science.

[50]  T. Aigaki,et al.  Overexpression of a pattern-recognition receptor, peptidoglycan-recognition protein-LE, activates imd/relish-mediated antibacterial defense and the prophenoloxidase cascade in Drosophila larvae , 2002, Proceedings of the National Academy of Sciences of the United States of America.