Developing Gram-negative bacteria for the secretion of heterologous proteins
暂无分享,去创建一个
Danielle Tullman-Ercek | Lisa Ann Burdette | Samuel Alexander Leach | Han Teng Wong | D. Tullman-Ercek | Lisa A Burdette | S. Leach
[1] Germán L. Rosano,et al. New tools for recombinant protein production in Escherichia coli: A 5‐year update , 2019, Protein science : a publication of the Protein Society.
[2] Robert Carlson. Estimating the biotech sector's contribution to the US economy , 2016, Nature Biotechnology.
[3] O. Spadiut,et al. Simple monitoring of cell leakiness and viability in Escherichia coli bioprocesses—A case study , 2017, Engineering in life sciences.
[4] J. Weigelt,et al. A secretory system for bacterial production of high‐profile protein targets , 2011, Protein science : a publication of the Protein Society.
[5] A. Hochschild,et al. Generating extracellular amyloid aggregates using E. coli cells. , 2012, Genes & development.
[6] C. Lesser,et al. High-Throughput Screening of Type III Secretion Determinants Reveals a Major Chaperone-Independent Pathway , 2018, mBio.
[7] M. Chapman,et al. Secretion of curli fibre subunits is mediated by the outer membrane‐localized CsgG protein , 2006, Molecular microbiology.
[8] T. Smart,et al. HEK293 cell line: a vehicle for the expression of recombinant proteins. , 2005, Journal of pharmacological and toxicological methods.
[9] Henrik Nielsen,et al. Predicting Secretory Proteins with SignalP. , 2017, Methods in molecular biology.
[10] W. Jonckheere,et al. Secretion and functional display of fusion proteins through the curli biogenesis pathway , 2014, Molecular microbiology.
[11] D. Linke,et al. Type V secretion: mechanism(s) of autotransport through the bacterial outer membrane , 2012, Philosophical Transactions of the Royal Society B: Biological Sciences.
[12] S. C. Kim,et al. A lower isoelectric point increases signal sequence–mediated secretion of recombinant proteins through a bacterial ABC transporter , 2017, The Journal of Biological Chemistry.
[13] Neel S. Joshi,et al. Repurposing bacterial extracellular matrix for selective and differential abstraction of rare earth elements , 2018 .
[14] T. Lu,et al. Strong underwater adhesives made by self-assembling multi-protein nanofibres. , 2014, Nature nanotechnology.
[15] J. Song,et al. Enhanced production of ATP-binding cassette protein exporter-dependent lipase by modifying the growth medium components of Pseudomonas fluorescens , 2014, Biotechnology Letters.
[16] J. V. Van Impe,et al. Protein secretion biotechnology in Gram-positive bacteria with special emphasis on Streptomyces lividans. , 2014, Biochimica et biophysica acta.
[17] Søren Brunak,et al. Prediction of twin-arginine signal peptides , 2005, BMC Bioinformatics.
[18] J. Song,et al. High-level production of Serratia proteamaculans metalloprotease using a recombinant ABC protein exporter-mediated secretion system in Pseudomonas fluorescens , 2014 .
[19] Timothy K Lu,et al. Synthetic biology and microbioreactor platforms for programmable production of biologics at the point-of-care , 2016, Nature Communications.
[20] Germán L. Rosano,et al. Recombinant protein expression in Escherichia coli: advances and challenges , 2014, Front. Microbiol..
[21] James W. Wilson,et al. Transfer of the cloned Salmonella SPI-1 type III secretion system and characterization of its expression mechanisms in Gram negative bacteria in comparison with cloned SPI-2. , 2015, Microbiological research.
[22] T. Lu,et al. Self-Assembling Multi-Component Nanofibers for Strong Bioinspired Underwater Adhesives , 2014, Nature nanotechnology.
[23] Karl Friehs,et al. Secretion of recombinant proteins from E. coli , 2018, Engineering in life sciences.
[24] D. Büttner. Protein Export According to Schedule: Architecture, Assembly, and Regulation of Type III Secretion Systems from Plant- and Animal-Pathogenic Bacteria , 2012, Microbiology and Molecular Reviews.
[25] Quanfeng Liang,et al. Exploring the N‐terminal role of a heterologous protein in secreting out of Escherichia coli , 2016, Biotechnology and bioengineering.
[26] J. V. van Dijl,et al. The Tat system of Gram-positive bacteria. , 2014, Biochimica et biophysica acta.
[27] Y. Moon,et al. Identification of the minimal region in lipase ABC transporter recognition domain of Pseudomonas fluorescens for secretion and fluorescence of green fluorescent protein , 2012, Microbial Cell Factories.
[28] James Bevington,et al. Proteins adopt functionally active conformations after type III secretion , 2016, Microbial Cell Factories.
[29] R. Freudl. Signal peptides for recombinant protein secretion in bacterial expression systems , 2018, Microbial Cell Factories.
[30] A. Driessen,et al. Sec- and Tat-mediated protein secretion across the bacterial cytoplasmic membrane--distinct translocases and mechanisms. , 2008, Biochimica et biophysica acta.
[31] W. Tong,et al. Construction of leaky strains and extracellular production of exogenous proteins in recombinant Escherichia coli , 2014, Microbial biotechnology.
[32] James J. Collins,et al. Portable, On-Demand Biomolecular Manufacturing , 2016, Cell.
[33] Rachel Chen,et al. Biotechnological applications of bacterial protein secretion: from therapeutics to biofuel production. , 2013, Research in microbiology.
[34] H. Mottaz,et al. Direct Involvement of Type II Secretion System in Extracellular Translocation of Shewanella oneidensis Outer Membrane Cytochromes MtrC and OmcA , 2008, Journal of bacteriology.
[35] K. Hughes,et al. Comparative analysis of the secretion capability of early and late flagellar type III secretion substrates , 2014, Molecular microbiology.
[36] F. Baneyx. Recombinant protein expression in Escherichia coli. , 1999, Current opinion in biotechnology.
[37] C. Arrieumerlou,et al. A bacterial type III secretion-based protein delivery tool for broad applications in cell biology , 2015, The Journal of cell biology.
[38] Extracellular secretion of a recombinant therapeutic peptide by Bacillus halodurans utilizing a modified flagellin type III secretion system , 2011, Microbial cell factories.
[39] A. Riggs,et al. Expression in Escherichia coli of chemically synthesized genes for human insulin. , 1979, Proceedings of the National Academy of Sciences of the United States of America.
[40] Martin Dragosits,et al. Recombinant Fab expression and secretion in Escherichia coli continuous culture at medium cell densities: Influence of temperature , 2012 .
[41] F. Baneyx,et al. Recombinant protein folding and misfolding in Escherichia coli , 2004, Nature Biotechnology.
[42] P. Gál,et al. Application of a Short, Disordered N-Terminal Flagellin Segment, a Fully Functional Flagellar Type III Export Signal, to Expression of Secreted Proteins , 2009, Applied and Environmental Microbiology.
[43] C. Schwarz,et al. An A/U-Rich Enhancer Region Is Required for High-Level Protein Secretion through the HlyA Type I Secretion System , 2017, Applied and Environmental Microbiology.
[44] M. W. Jackson,et al. Calcium-Regulated Type III Secretion of Yop Proteins by an Escherichia coli hha Mutant Carrying a Yersinia pestis pCD1 Virulence Plasmid , 2006, Infection and Immunity.
[45] T. Shiba,et al. Improved Secretory Production of Recombinant Proteins by Random Mutagenesis of hlyB, an Alpha-Hemolysin Transporter from Escherichia coli , 2005, Applied and Environmental Microbiology.
[46] P. Greenfield,et al. Stability of recombinant plasmids in yeast , 1988 .
[47] Jeremy Minshull,et al. Engineering the Salmonella type III secretion system to export spider silk monomers , 2009, Molecular systems biology.
[48] W. Jong,et al. Type V secretion: from biogenesis to biotechnology. , 2014, Biochimica et biophysica acta.
[49] C. Finnerty,et al. Using Transcriptional Control To Increase Titers of Secreted Heterologous Proteins by the Type III Secretion System , 2014, Applied and Environmental Microbiology.
[50] D. Missiakas,et al. Minireview Protein Folding in the Bacterial Periplasm , 1997 .
[51] T. Linke,et al. Novel signal peptides improve the secretion of recombinant Staphylococcus aureus Alpha toxinH35L in Escherichia coli , 2017, AMB Express.
[52] K. Bayer,et al. A Comparative Analysis of Industrial Escherichia coli K–12 and B Strains in High-Glucose Batch Cultivations on Process-, Transcriptome- and Proteome Level , 2013, PloS one.
[53] Carl-Gustaf Rosen,et al. Process Economics of Animal Cell and Bacterial Fermentations: A Case Study Analysis of Tissue Plasminogen Activator , 1993, Bio/Technology.
[54] L. McIntosh,et al. A protein export pathway involving Escherichia coli porins. , 2012, Structure.
[55] R. Lyons,et al. Purification of recombinant protein by cold‐coacervation of fusion constructs incorporating resilin‐inspired polypeptides , 2012, Biotechnology and bioengineering.
[56] R. Illias,et al. Proteome-based identification of signal peptides for improved secretion of recombinant cyclomaltodextrin glucanotransferase in Escherichia coli , 2017 .
[57] H. Matsui,et al. Hyper-production of an isomalto-dextranase of an Arthrobacter sp. by a proteases-deficient Bacillus subtilis: sequencing, properties, and crystallization of the recombinant enzyme , 2004, Applied Microbiology and Biotechnology.
[58] Jian Chen,et al. Molecular engineering of secretory machinery components for high-level secretion of proteins in Bacillus species , 2014, Journal of Industrial Microbiology & Biotechnology.
[59] D. Belin,et al. Expression of the endogenous type II secretion pathway in Escherichia coli leads to chitinase secretion , 2000, The EMBO journal.
[60] W. Ma,et al. Modified Recombinant Proteins Can Be Exported via the Sec Pathway in Escherichia coli , 2012, PloS one.
[61] D. Yoshikami,et al. Selective Purification of Recombinant Neuroactive Peptides Using the Flagellar Type III Secretion System , 2012, mBio.
[62] Gregory Zarbis-Papastoitsis,et al. A single-use purification process for the production of a monoclonal antibody produced in a PER.C6 human cell line. , 2011, Biotechnology journal.
[63] Jing Chen,et al. Extracellular overexpression of recombinant Thermobifida fusca cutinase by alpha-hemolysin secretion system in E. coli BL21(DE3) , 2012, Microbial Cell Factories.
[64] Z. Ignatova,et al. Improvement of Posttranslational Bottlenecks in the Production of Penicillin Amidase in Recombinant Escherichiacoli Strains , 2003, Applied and Environmental Microbiology.
[65] C. Schwarz,et al. Using an E. coli Type 1 secretion system to secrete the mammalian, intracellular protein IFABP in its active form. , 2012, Journal of biotechnology.
[66] H. Carleton,et al. Engineering the type III secretion system in non-replicating bacterial minicells for antigen delivery , 2013, Nature Communications.
[67] L. Schmitt,et al. The Type 1 secretion pathway - the hemolysin system and beyond. , 2014, Biochimica et biophysica acta.
[68] K. Jeong,et al. Enhanced secretion of recombinant proteins via signal recognition particle (SRP)‐dependent secretion pathway by deletion of rrsE in Escherichia coli , 2016, Biotechnology and bioengineering.
[69] W. Hol,et al. The type II secretion system: biogenesis, molecular architecture and mechanism , 2012, Nature Reviews Microbiology.
[70] J. V. Van Impe,et al. Recombinant protein production and streptomycetes. , 2012, Journal of biotechnology.
[71] L. Harvey,et al. Heterologous protein production using the Pichia pastoris expression system , 2005, Yeast.
[72] Peter Q Nguyen,et al. Scalable Production of Genetically Engineered Nanofibrous Macroscopic Materials via Filtration. , 2017, ACS biomaterials science & engineering.
[73] Lixin Ma,et al. Non-peptide guided auto-secretion of recombinant proteins by super-folder green fluorescent protein in Escherichia coli , 2017, Scientific Reports.
[74] Adam C. Fisher,et al. Production of Secretory and Extracellular N-Linked Glycoproteins in Escherichia coli , 2010, Applied and Environmental Microbiology.
[75] N. Mackman,et al. Release of a chimeric protein into the medium from Escherichia coli using the C‐terminal secretion signal of haemolysin. , 1987, The EMBO journal.
[76] D. Mark,et al. Site-specific mutagenesis of the human interleukin-2 gene: structure-function analysis of the cysteine residues. , 1984, Science.
[77] Túlio Marcos Santos,et al. Up-To-Date Insight on Industrial Enzymes Applications and Global Market , 2012 .
[78] R. Jerala,et al. Production of recombinant antimicrobial peptides in bacteria. , 2010, Methods in molecular biology.
[79] Han Teng Wong,et al. A Secretion-Amplification Role for Salmonella enterica Translocon Protein SipD. , 2017, ACS synthetic biology.
[80] Jason T Boock,et al. Universal genetic assay for engineering extracellular protein expression. , 2014, ACS synthetic biology.
[81] Colin Robinson,et al. Escherichia coli “TatExpress” strains super‐secrete human growth hormone into the bacterial periplasm by the Tat pathway , 2017, Biotechnology and bioengineering.
[82] S. Smits,et al. The Rate of Folding Dictates Substrate Secretion by the Escherichia coli Hemolysin Type 1 Secretion System* , 2010, The Journal of Biological Chemistry.
[83] W. Ramirez,et al. Dynamics of foreign protein secretion from Saccharomyces cerevisiae , 1989, Biotechnology and bioengineering.
[84] Xiangdong Gao,et al. Engineering Extracellular Expression Systems in Escherichia coli Based on Transcriptome Analysis and Cell Growth State. , 2018, ACS synthetic biology.
[85] P. Sansonetti,et al. Secretion of Ipa proteins by Shigella flexneri: inducer molecules and kinetics of activation , 1997, Infection and immunity.
[86] S. Brokx,et al. Extracellular accumulation of recombinant proteins fused to the carrier protein YebF in Escherichia coli , 2006, Nature Biotechnology.
[87] A. Murad,et al. An effective extracellular protein secretion by an ABC transporter system in Escherichia coli: statistical modeling and optimization of cyclodextrin glucanotransferase secretory production , 2011, Journal of Industrial Microbiology & Biotechnology.
[88] A. Demain,et al. Production of recombinant proteins by microbes and higher organisms. , 2009, Biotechnology advances.
[89] Jason T Boock,et al. An Engineered Survival-Selection Assay for Extracellular Protein Expression Uncovers Hypersecretory Phenotypes in Escherichia coli. , 2017, ACS synthetic biology.
[90] K. Kaur,et al. Structure and biophysics of type III secretion in bacteria. , 2013, Biochemistry.
[91] I. Henderson,et al. Size and Conformation Limits to Secretion of Disulfide-bonded Loops in Autotransporter Proteins* , 2011, The Journal of Biological Chemistry.
[92] Mike Hoare,et al. Enhancing the selective extracellular location of a recombinant E. coli domain antibody by management of fermentation conditions , 2015, Applied Microbiology and Biotechnology.
[93] J. H. Park,et al. Secretory production of enzymatically active endo-β-1,4-mannanase from Bacillus subtilis by ABC exporter in Escherichia coli , 2016 .
[94] L. Schmitt,et al. Type I Protein Secretion-Deceptively Simple yet with a Wide Range of Mechanistic Variability across the Family. , 2016, EcoSal Plus.
[95] Lidia Westers,et al. Bacillus subtilis as cell factory for pharmaceutical proteins: a biotechnological approach to optimize the host organism. , 2004, Biochimica et biophysica acta.
[96] Oliver Spadiut,et al. The Rocky Road From Fed-Batch to Continuous Processing With E. coli , 2019, Front. Bioeng. Biotechnol..
[97] N. Wan,et al. High-level expression and stabilization of recombinant human chitinase produced in a continuous constitutive Pichia pastoris expression system. , 2001, Biotechnology and bioengineering.
[98] V. de Lorenzo,et al. Specific Secretion of Active Single-Chain Fv Antibodies into the Supernatants of Escherichia coliCultures by Use of the Hemolysin System , 2000, Applied and Environmental Microbiology.
[99] G. Riley,et al. Detection of pathogenic Yersinia enterocolitica by using congo red-magnesium oxalate agar medium. , 1989 .
[100] K. Hughes,et al. Analysis of Factors That Affect FlgM-Dependent Type III Secretion for Protein Purification with Salmonella enterica Serovar Typhimurium , 2014, Journal of bacteriology.
[101] W. Schumann,et al. Optimization of the secretion pathway for heterologous proteins in Bacillus subtilis , 2015, Biotechnology and Bioprocess Engineering.
[102] A novel secretion and online-cleavage strategy for production of cecropin A in Escherichia coli , 2017, Scientific Reports.
[103] Zsofia Botyanszki,et al. Programmable biofilm-based materials from engineered curli nanofibres , 2014, Nature Communications.
[104] Timo K. Korhonen,et al. Extracellular secretion of polypeptides using a modified Escherichia coli flagellar secretion apparatus , 2005, Nature Biotechnology.
[105] Robert J Citorik,et al. Synthesis and patterning of tunable multiscale materials with engineered cells , 2014, Nature materials.
[106] J. H. Park,et al. Alleviation of temperature-sensitive secretion defect of Pseudomonas fluorescens ATP-binding cassette (ABC) transporter, TliDEF, by a change of single amino acid in the ABC protein, TliD. , 2016, Journal of bioscience and bioengineering.
[107] R. Illias,et al. Enhanced secretory production of hemolysin-mediated cyclodextrin glucanotransferase in Escherichia coli by random mutagenesis of the ABC transporter system. , 2010, Journal of biotechnology.
[108] J. Rhee,et al. Enhancement of the Efficiency of Secretion of Heterologous Lipase in Escherichia coli by Directed Evolution of the ABC Transporter System , 2005, Applied and Environmental Microbiology.
[109] E Schwarz,et al. Advances in refolding of proteins produced in E. coli. , 1998, Current opinion in biotechnology.
[110] C. Voigt,et al. Control of type III protein secretion using a minimal genetic system , 2017, Nature Communications.
[111] K. Terpe. Overview of bacterial expression systems for heterologous protein production: from molecular and biochemical fundamentals to commercial systems , 2006, Applied Microbiology and Biotechnology.
[112] Gabriel Waksman,et al. Secretion systems in Gram-negative bacteria: structural and mechanistic insights , 2015, Nature Reviews Microbiology.
[113] Q. Qi,et al. Identification of a heterologous cellulase and its N-terminus that can guide recombinant proteins out of Escherichia coli , 2015, Microbial Cell Factories.
[114] Cheng Li,et al. Type III secretion as a generalizable strategy for the production of full‐length biopolymer‐forming proteins , 2016, Biotechnology and bioengineering.
[115] M Angela Taipa,et al. Antibodies and Genetically Engineered Related Molecules: Production and Purification , 2004, Biotechnology progress.
[116] A. Kuhn,et al. Protein traffic in Gram-negative bacteria--how exported and secreted proteins find their way. , 2012, FEMS microbiology reviews.
[117] I. Henderson,et al. A generalised module for the selective extracellular accumulation of recombinant proteins , 2012, Microbial Cell Factories.
[118] S. Weidtkamp‐Peters,et al. Directionality of substrate translocation of the hemolysin A Type I secretion system , 2015, Scientific Reports.
[119] Gyun Min Lee,et al. CHO cells in biotechnology for production of recombinant proteins: current state and further potential , 2012, Applied Microbiology and Biotechnology.
[120] B. Auer,et al. FlgM as a Secretion Moiety for the Development of an Inducible Type III Secretion System , 2013, PloS one.
[121] S. He,et al. Cloned Erwinia chrysanthemi out genes enable Escherichia coli to selectively secrete a diverse family of heterologous proteins to its milieu. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[122] O. Spadiut,et al. How to trigger periplasmic release in recombinant Escherichia coli: A comparative analysis , 2017, Engineering in life sciences.
[123] Xiao-Xia Xia,et al. Proteome‐based identification of fusion partner for high‐level extracellular production of recombinant proteins in Escherichia coli , 2008, Biotechnology and bioengineering.
[124] Seung Hwan Lee,et al. Efficient extracellular production of type I secretion pathway-dependent Pseudomonas fluorescens lipase in recombinant Escherichia coli by heterologous ABC protein exporters , 2014, Biotechnology Letters.
[125] Martin G. Nussbaumer,et al. Bootstrapped Biocatalysis: Biofilm‐Derived Materials as Reversibly Functionalizable Multienzyme Surfaces , 2017, ChemCatChem.
[126] F. C. Davis,et al. Enhancement of Expression and Apparent Secretion ofErwinia chrysanthemi Endoglucanase (Encoded bycelZ) in Escherichia coli B , 1999, Applied and Environmental Microbiology.
[127] Sibel Ÿztürk,et al. Fed-Batch Biomolecule Production by Bacillus subtilis: A State of the Art Review. , 2016, Trends in biotechnology.
[128] A. Wagers,et al. Engineering Escherichia coli into a Protein Delivery System for Mammalian Cells , 2015, ACS synthetic biology.
[129] D. Agard,et al. Analysis of prepro-alpha-lytic protease expression in Escherichia coli reveals that the pro region is required for activity , 1989, Journal of bacteriology.
[130] Y. Okahata,et al. Translation enhancer improves the ribosome liberation from translation initiation. , 2013, Journal of the American Chemical Society.
[131] B. Álvarez,et al. Engineering the Controlled Assembly of Filamentous Injectisomes in E. coli K-12 for Protein Translocation into Mammalian Cells , 2015, ACS synthetic biology.
[132] Thomas F. Meyer,et al. The Autodisplay Story, from Discovery to Biotechnical and Biomedical Applications , 2007, Microbiology and Molecular Biology Reviews.
[133] J. Barbero,et al. Increasing the Efficiency of Protein Export in Escherichia coli , 1994, Bio/Technology.
[134] C. Chou,et al. Enhancing functional expression of heterologous lipase B in Escherichia coli by extracellular secretion , 2010, Journal of Industrial Microbiology & Biotechnology.
[135] Neel S. Joshi,et al. Modulating bacterial and gut mucosal interactions with engineered biofilm matrix proteins , 2018, Scientific Reports.
[136] T. J. Mansell,et al. Linkage-Specific Detection and Metabolism of Human Milk Oligosaccharides in Escherichia coli. , 2018, Cell chemical biology.
[137] B. Kenny,et al. Analysis of the haemolysin transport process through the secretion from Escherichia coli of PCM, CAT or β‐galactosidase fused to the Hly C‐terminal signal domain , 1991, Molecular microbiology.