Repeated sequences from theArabidopsis thaliana genome function as enhancers in transgenic tobacco

Sixteen segments ofArabidopsis thaliana DNA that function as enhancers in transgenic tobacco plants were isolated using the pROA97 enhancer cloning vehicle and library transformation ofNicotiana tabacum. The sequences were compared for AT content, homology, repeated motifs, and expression pattern in transgenicN. tabacum. The sequences were average with respect to the AT content ofA. thaliana DNA. They could be placed into seven homology groups. Five of the sequences are single-copy sequences. The remaining eleven sequences represent two homology groups. Homology Group I contains seven sequences with minor differences. Homology Group II contains four sequences with minor differences. Two repeated motifs were identified (5′-CCTCT-3′ and 5′-AAGGAT-3′). Both repeated motifs are found in other plant enhancers, and in the promoter region of the cauliflower mosaic virus 35S gene. In the 35S gene TATA region, the motifs can form two alternative stem-loop structures. The TATATAA sequence is located in the loop region of both stem-loop structures.

[1]  N. Chua,et al.  Enhancer sequences from Arabidopsis thaliana obtained by library transformation of Nicotiana tabacum , 1990, Molecular and General Genetics MGG.

[2]  E. Meyerowitz,et al.  The DNA of Arabidopsis thaliana , 1984, Molecular and General Genetics MGG.

[3]  A. Sonenshein,et al.  Genetic Fusion of E. coli lac Genes to a B. subtilis Promoter 1 , 1982 .

[4]  J. Schell,et al.  Gene tagging in plants by a T-DNA insertion mutagen that generates APH(3′)II-plant gene fusions , 1986, Molecular and General Genetics MGG.

[5]  N. Chua,et al.  A bidirectional enhancer cloning vehicle for higher plants , 1990, Molecular and General Genetics MGG.

[6]  James B. Hicks,et al.  A plant DNA minipreparation: Version II , 1983, Plant Molecular Biology Reporter.

[7]  W. Gehring,et al.  Detection in situ of genomic regulatory elements in Drosophila. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[8]  S. Cohen,et al.  Analysis of gene control signals by DNA fusion and cloning in Escherichia coli. , 1980, Journal of molecular biology.

[9]  P. Benfey,et al.  The CaMV 35S enhancer contains at least two domains which can confer different developmental and tissue‐specific expression patterns , 1989, The EMBO journal.

[10]  C. Wilson,et al.  P-element-mediated enhancer detection: a versatile method to study development in Drosophila. , 1989, Genes & development.

[11]  C. Koncz,et al.  High-frequency T-DNA-mediated gene tagging in plants. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[12]  S. Horinouchi,et al.  Construction and application of a promoter-probe plasmid that allows chromogenic identification in Streptomyces lividans , 1985, Journal of bacteriology.

[13]  J. Fry,et al.  A simple and general method for transferring genes into plants. , 1985, Science.

[14]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[15]  Ronald W. Davis,et al.  Reversion of a promoter deletion in yeast , 1982, Nature.

[16]  T. Maniatis,et al.  Regulation of inducible and tissue-specific gene expression. , 1987, Science.

[17]  G. An,et al.  Plasmid vehicles for direct cloning of Escherichia coli promoters , 1979, Journal of bacteriology.

[18]  W. Gruissem,et al.  Genomic organization, sequence analysis and expression of all five genes encoding the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase from tomato , 1987, Molecular and General Genetics MGG.

[19]  F. Nagy,et al.  Identification of DNA sequences required for activity of the cauliflower mosaic virus 35S promoter , 1985, Nature.

[20]  F. Nagy,et al.  Organ-Specific and Light-Induced Expression of Plant Genes , 1986, Science.

[21]  P. Benfey,et al.  Sequence Requirements of the 5-Enolpyruvylshikimate-3-phosphate Synthase 5[prime]-Upstream Region for Tissue-Specific Expression in Flowers and Seedlings. , 1990, The Plant cell.

[22]  M. Van Montagu,et al.  Isolation of tobacco DNA segments with plant promoter activity , 1986, Molecular and cellular biology.

[23]  A. Joyner,et al.  Mouse embryonic stem cells and reporter constructs to detect developmentally regulated genes. , 1989, Science.

[24]  R. Jefferson Assaying chimeric genes in plants: The GUS gene fusion system , 1987, Plant Molecular Biology Reporter.

[25]  M. Van Montagu,et al.  Identification of plant promoters in situ by T‐DNA‐mediated transcriptional fusions to the npt‐II gene , 1986, The EMBO journal.

[26]  T. Uemura,et al.  Searching for pattern and mutation in the Drosophila genome with a P-lacZ vector. , 1989, Genes & development.

[27]  M. Bevan,et al.  GUS fusions: beta‐glucuronidase as a sensitive and versatile gene fusion marker in higher plants. , 1987, The EMBO journal.

[28]  H. Klee,et al.  Gene rescue in plants: A model system for “shotgun” cloning by retransformation , 1987, Molecular and General Genetics MGG.

[29]  N. Chua,et al.  Dissection of 5′ upstream sequences for selective expression of the Nicotiana plumbaginifolia rbcS-8B gene , 1988, Molecular and General Genetics MGG.

[30]  A. Sonenshein,et al.  Promoter-probe plasmid for Bacillus subtilis , 1984, Journal of bacteriology.

[31]  C. Kuhlemeier,et al.  Regulation of Gene Expression in Higher Plants , 1987 .