Automated Tracing of Neurites from Light Microscopy Stacks of Images
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[1] Eugene W. Myers,et al. Automatic Neuron Tracing in Volumetric Microscopy Images with Anisotropic Path Searching , 2010, MICCAI.
[2] Hong Shen,et al. Rapid automated tracing and feature extraction from retinal fundus images using direct exploratory algorithms , 1999, IEEE Transactions on Information Technology in Biomedicine.
[3] HighWire Press. Philosophical Transactions of the Royal Society of London , 1781, The London Medical Journal.
[4] Eric L. Miller,et al. Automated Axon Tracking of 3D Confocal Laser Scanning Microscopy Images Using Guided Probabilistic Region Merging , 2007, Neuroinformatics.
[5] Alejandro F. Frangi,et al. 3D MRA coronary axis determination using a minimum cost path approach , 2002, Magnetic resonance in medicine.
[6] G. Shepherd,et al. Transient and Persistent Dendritic Spines in the Neocortex In Vivo , 2005, Neuron.
[7] D Marr,et al. Theory of edge detection , 1979, Proceedings of the Royal Society of London. Series B. Biological Sciences.
[8] Kunal K. Ghosh,et al. Advances in light microscopy for neuroscience. , 2009, Annual review of neuroscience.
[9] Demetri Terzopoulos,et al. Snakes: Active contour models , 2004, International Journal of Computer Vision.
[10] Mathews Jacob,et al. Design of steerable filters for feature detection using canny-like criteria , 2004, IEEE Transactions on Pattern Analysis and Machine Intelligence.
[11] Pascal Fua,et al. Steerable Features for Statistical 3D Dendrite Detection , 2009, MICCAI.
[12] Giorgio A. Ascoli,et al. The DIADEM Metric: Comparing Multiple Reconstructions of the Same Neuron , 2011, Neuroinformatics.
[13] K. Harris,et al. Ultrastructural Analysis of Hippocampal Neuropil from the Connectomics Perspective , 2010, Neuron.
[14] Jeremy D. Schmahmann,et al. A Proposal for a Coordinated Effort for the Determination of Brainwide Neuroanatomical Connectivity in Model Organisms at a Mesoscopic Scale , 2009, PLoS Comput. Biol..
[15] Christophe Lenglet,et al. ODF reconstruction in q-ball imaging with solid angle consideration , 2009, 2009 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[16] Jürgen Weese,et al. Multi-scale line segmentation with automatic estimation of width, contrast and tangential direction in 2D and 3D medical images , 1997, CVRMed.
[17] Andrew J. Davison,et al. Active Matching , 2008, ECCV.
[18] Edsger W. Dijkstra,et al. A note on two problems in connexion with graphs , 1959, Numerische Mathematik.
[19] Christian Van den Broeck,et al. Statistical Mechanics of Learning , 2001 .
[20] D. Chklovskii,et al. Wiring optimization can relate neuronal structure and function. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[21] Edward H. Adelson,et al. The Design and Use of Steerable Filters , 1991, IEEE Trans. Pattern Anal. Mach. Intell..
[22] Olaf Sporns,et al. The Human Connectome: A Structural Description of the Human Brain , 2005, PLoS Comput. Biol..
[23] D. Chklovskii,et al. Geometry and Structural Plasticity of Synaptic Connectivity , 2002, Neuron.
[24] R. W. Draft,et al. Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system , 2007, Nature.
[25] Rangasami L. Kashyap,et al. Building Skeleton Models via 3-D Medial Surface/Axis Thinning Algorithms , 1994, CVGIP Graph. Model. Image Process..
[26] L. Luo,et al. Comprehensive Maps of Drosophila Higher Olfactory Centers: Spatially Segregated Fruit and Pheromone Representation , 2007, Cell.
[27] Deniz Erdogmus,et al. Piecewise linear cylinder models for 3-dimensional axon segmentation in Brainbow imagery , 2010, 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[28] Alex S. Ferecskó,et al. Local Potential Connectivity in Cat Primary Visual Cortex , 2008 .
[29] Arthur W. Toga,et al. Three-dimensional skeleton and centerline generation based on an approximate minimum distance field , 1998, The Visual Computer.
[30] R. Yuste,et al. Morphological changes in dendritic spines associated with long-term synaptic plasticity. , 2001, Annual review of neuroscience.
[31] Ju Lu,et al. The Interscutularis Muscle Connectome , 2009, PLoS biology.
[32] Alex M. Andrew,et al. Level Set Methods and Fast Marching Methods: Evolving Interfaces in Computational Geometry, Fluid Mechanics, Computer Vision, and Materials Science (2nd edition) , 2000 .
[33] W. Brent Lindquist,et al. Automated Algorithms for Multiscale Morphometry of Neuronal Dendrites , 2004, Neural Computation.
[34] J. van Pelt,et al. Analysis of tubular structures in three-dimensional confocal images , 2002, Network.
[35] Luc Van Gool,et al. What's going on? Discovering spatio-temporal dependencies in dynamic scenes , 2010, 2010 IEEE Computer Society Conference on Computer Vision and Pattern Recognition.
[36] J. Livet,et al. A technicolour approach to the connectome , 2008, Nature Reviews Neuroscience.
[37] Alejandro F. Frangi,et al. Muliscale Vessel Enhancement Filtering , 1998, MICCAI.
[38] Erik Meijering,et al. Neuron tracing in perspective , 2010, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[39] K. Svoboda,et al. Cell Type-Specific Structural Plasticity of Axonal Branches and Boutons in the Adult Neocortex , 2006, Neuron.
[40] Armen Stepanyants,et al. Detection of the optimal neuron traces in confocal microscopy images , 2009, Journal of Neuroscience Methods.
[41] Pascal Fua,et al. Automated Delineation of Dendritic Networks in Noisy Image Stacks , 2008, ECCV.
[42] Ju Lu,et al. The DIADEM Data Sets: Representative Light Microscopy Images of Neuronal Morphology to Advance Automation of Digital Reconstructions , 2011, Neuroinformatics.
[43] N. Kasthuri,et al. Long-term dendritic spine stability in the adult cortex , 2002, Nature.
[44] W. Denk,et al. Serial Block-Face Scanning Electron Microscopy to Reconstruct Three-Dimensional Tissue Nanostructure , 2004, PLoS biology.
[45] D. Chklovskii,et al. Neurogeometry and potential synaptic connectivity , 2005, Trends in Neurosciences.
[46] John C. Russ,et al. The Image Processing Handbook , 2016, Microscopy and Microanalysis.
[47] Arthur W. Toga,et al. Efficient Skeletonization of Volumetric Objects , 1999, IEEE Trans. Vis. Comput. Graph..
[48] N. Kasthuri,et al. Automating the Collection of Ultrathin Serial Sections for Large Volume TEM Reconstructions , 2006, Microscopy and Microanalysis.
[49] D. Chklovskii,et al. Class-Specific Features of Neuronal Wiring , 2004, Neuron.
[50] K. Svoboda,et al. Long-term in vivo imaging of experience-dependent synaptic plasticity in adult cortex , 2002, Nature.
[51] S. Brenner,et al. The structure of the nervous system of the nematode Caenorhabditis elegans. , 1986, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[52] Khalid A. Al-Kofahi,et al. Rapid automated three-dimensional tracing of neurons from confocal image stacks , 2002, IEEE Transactions on Information Technology in Biomedicine.
[53] Jocelyne Troccaz,et al. CVRMed-MRCAS'97 , 1997, Lecture Notes in Computer Science.
[54] R. C Cannon,et al. An on-line archive of reconstructed hippocampal neurons , 1998, Journal of Neuroscience Methods.
[55] William M. Wells,et al. Medical Image Computing and Computer-Assisted Intervention — MICCAI’98 , 1998, Lecture Notes in Computer Science.
[56] Guido Gerig,et al. Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images , 1998, Medical Image Anal..
[57] Prof. Dr. Dr. Valentino Braitenberg,et al. Cortex: Statistics and Geometry of Neuronal Connectivity , 1998, Springer Berlin Heidelberg.
[58] Deniz Erdogmus,et al. Principal curve tracing , 2010, ESANN.
[59] Tarec Fares,et al. Structural Plasticity of Circuits in Cortical Neuropil , 2008, The Journal of Neuroscience.
[60] Laurent D. Cohen,et al. Fast extraction of minimal paths in 3D images and applications to virtual endoscopy , 2001, Medical Image Anal..
[61] Attila Kuba,et al. A 3D 6-subiteration thinning algorithm for extracting medial lines , 1998, Pattern Recognit. Lett..
[62] Pascal Fua,et al. Delineating trees in noisy 2D images and 3D image-stacks , 2010, 2010 IEEE Computer Society Conference on Computer Vision and Pattern Recognition.
[63] Alex S. Ferecskó,et al. The fractions of short- and long-range connections in the visual cortex , 2009, Proceedings of the National Academy of Sciences.
[64] Kevin L. Briggman,et al. Towards neural circuit reconstruction with volume electron microscopy techniques , 2006, Current Opinion in Neurobiology.
[65] Xiaobo Zhou,et al. DYNAMIC LOCAL TRACING FOR 3D AXON CURVILINEAR STRUCTURE DETECTION FROM MICROSCOPIC IMAGE STACK , 2007, 2007 4th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[66] Stephen T. C. Wong,et al. Automated Axon Tracking of 3D Confocal Laser Scanning Microscopy Images Using Guided Probabilistic Region Merging , 2009, Neuroinformatics.
[67] J. Sanes,et al. Ome sweet ome: what can the genome tell us about the connectome? , 2008, Current Opinion in Neurobiology.
[68] Stephen P. Boyd,et al. Convex Optimization , 2004, Algorithms and Theory of Computation Handbook.