Structures and Encapsulation Motifs of Functional Molecules Probed by Laser Spectroscopic and Theoretical Methods

We report laser spectroscopic and computational studies of host/guest hydration interactions between functional molecules (hosts) and water (guest) in supersonic jets. The examined hosts include dibenzo-18-crown-6-ether (DB18C6), benzo-18-crown-6-ether (B18C6) and calix[4]arene (C4A). The gaseous complexes between the functional molecular hosts and water are generated under jet-cooled conditions. Various laser spectroscopic methods are applied for these species: the electronic spectra are observed by laser-induced fluorescence (LIF), mass-selected resonance enhanced multiphoton ionization (REMPI) and ultraviolet-ultraviolet hole-burning (UV-UV HB) spectroscopy, whereas the vibrational spectra for each individual species are observed by infrared-ultraviolet double resonance (IR-UV DR) spectroscopy. The obained results are analyzed by first principles electronic structure calculations. We discuss the conformations of the host molecules, the structures of the complexes, and key interactions forming the specific complexes.

[1]  T. Vaden,et al.  Infrared spectroscopy of ionophore-model systems: hydrated alkali metal ion 18-crown-6 ether complexes. , 2009, Journal of the American Chemical Society.

[2]  M. Bühl,et al.  Hydronium ion complex of 18-crown-6: where are the protons? A density functional study of static and dynamic properties. , 2002, Journal of the American Chemical Society.

[3]  George A. Koutsantonis,et al.  Purification of C60 and C70 by selective complexation with calixarenes , 1994, Nature.

[4]  R. E. Terry,et al.  Calorimetric titration study of the interaction of some uni- and bivalent cations with benzo-15-crown-5, 18-crown-6, dibenzo-24-crown-8, and dibenzo-27-crown-9 in methanol-water solvents, at 25.degree.C and .mu. = 0.1 , 1976 .

[5]  J. Yi,et al.  Rotationally resolved electronic spectra of 1,2-dimethoxybenzene and the 1,2-dimethoxybenzene-water complex. , 2005, The journal of physical chemistry. A.

[6]  Dennis P. Nelson,et al.  Calorimetric study of the interaction in aqueous solution of several uni- and bivalent metal ions with the cyclic polyether dicyclohexyl-18-crown-6 at 10,25, and 40.deg. , 1971 .

[7]  A. Stuart,et al.  Perfluoroalkylated 4,13-diaza-18-crown-6 ethers: synthesis, phase-transfer catalysis, and recycling studies. , 2007, The Journal of organic chemistry.

[8]  P. Armentrout Cation-ether complexes in the gas phase: thermodynamic insight into molecular recognition , 1999 .

[9]  Y. Nibu,et al.  Infrared spectroscopy of hydrogen-bonded 2-fluoropyridine-water clusters in supersonic jets. , 2006, The journal of physical chemistry. A.

[10]  Dennis P. Nelson,et al.  Binding of Alkali Metal Ions by Cyclic Polyethers: Significance in Ion Transport Processes , 1969, Science.

[11]  S. Shinkai,et al.  Very Convenient and Efficient Purification Method for Fullerene (C60) with 5,11,17,23,29,35,41,47-Octa-tert-butylcalix[8]arene-49,50,51,52,53,54,55,56-octol , 1994 .

[12]  T. Ebata,et al.  Mode-dependent anharmonic coupling between OH stretching and intermolecular vibrations of the hydrogen-bonded clusters of phenol , 1998 .

[13]  H. S. Wolff,et al.  iRun: Horizontal and Vertical Shape of a Region-Based Graph Compression , 2022, Sensors.

[14]  (18-crown-6)potassium tris(thiocyanato)nickelate(II): Synthesis and crystal structure , 2008 .

[15]  M. Dobler Ionophores and Their Structures , 1981 .

[16]  T. Zwier,et al.  Water's role in reshaping a macrocycle's binding pocket: infrared and ultraviolet spectroscopy of benzo-15-crown-5-(H(2)O)(n) and 4'-aminobenzo-15-crown-5-(H(2)O)(n), n = 1, 2. , 2009, The journal of physical chemistry. A.

[17]  David E. Bernholdt,et al.  High performance computational chemistry: An overview of NWChem a distributed parallel application , 2000 .

[18]  J. D. Lamb,et al.  A systematic study of the effect of macrocycle ring size and donor atom type on the log K, .DELTA.H, and T.DELTA.S of reactions at 25.degree.C in methanol of mono- and divalent cations with crown ethers , 1980 .

[19]  Jet-cooled electronic and vibrational spectroscopy of crown ethers: benzo-15-crown-5 ether and 4'-amino-benzo-15-crown-5 ether. , 2009, The journal of physical chemistry. A.

[20]  K. Williams,et al.  Infrared multiphoton dissociation of electrosprayed crown ether complexes , 1996 .

[21]  T. H. Dunning Gaussian basis sets for use in correlated molecular calculations. I. The atoms boron through neon and hydrogen , 1989 .

[22]  T. Dunning,et al.  Electron affinities of the first‐row atoms revisited. Systematic basis sets and wave functions , 1992 .

[23]  T. Ebata,et al.  Electronic spectra of jet-cooled calix[4]arene and its van der Waals clusters: encapsulation of a neutral atom in a molecular bowl. , 2007, The Journal of chemical physics.

[24]  David Feller,et al.  Theoretical study of cation/ether complexes: 15-crown-5 and its alkali metal complexes , 2000 .

[25]  D. Dearden,et al.  Alkali metal binding energies of dibenzo-18-crown-6: experimental and computational results , 2003 .

[26]  H. Matsuura,et al.  Raman Spectroscopic Study of the Hydrates of 18-Crown-6 , 1995 .

[27]  M. Truter,et al.  Crystal structures of complexes between alkali-metal salts and cyclic polyethers. Part I. Complex formed between rubidium sodium isothiocyanate and 2,3,11,12-dibenzo-1,4,7,10,13,16-hexaoxocyclo-octadeca-2,11-diene (‘dibenzo-18-crown-6’) , 1970 .

[28]  S. F. Boys,et al.  The calculation of small molecular interactions by the differences of separate total energies. Some procedures with reduced errors , 1970 .

[29]  G. Herzberg,et al.  Molecular spectra and molecular structure. Vol.2: Infrared and Raman spectra of polyatomic molecules , 1945 .

[30]  S. Leutwyler,et al.  S1/S2 exciton splitting in the (2-pyridone)2 dimer , 2002 .

[31]  Sotiris S. Xantheas,et al.  Cooperativity and Hydrogen Bonding Network in Water Clusters , 2000 .

[32]  S. Xantheas,et al.  Structure of the calix[4]arene-(H2O) cluster: the world's smallest cup of water. , 2010, The journal of physical chemistry. A.

[33]  R. E. Terry,et al.  Calorimetric titration study of the interaction of several uni- and bivalent cations with 15-crown-5, 18-crown-6, and two isomers of dicyclohexo-18-crown-6 in aqueous solution at 25.degree.C and .mu. = 0.1 , 1976 .

[34]  P. B. Armentrout,et al.  INTRINSIC AFFINITIES OF ALKALI CATIONS FOR 15-CROWN-5 AND 18-CROWN-6 : BOND DISSOCIATION ENERGIES OF GAS-PHASE M+-CROWN ETHER COMPLEXES , 1999 .

[35]  J. Pople,et al.  Self—Consistent Molecular Orbital Methods. XII. Further Extensions of Gaussian—Type Basis Sets for Use in Molecular Orbital Studies of Organic Molecules , 1972 .

[36]  D. Cram,et al.  Container Molecules And Their Guests , 1994 .

[37]  T. Zwier,et al.  Size-Specific Infrared Spectra of Benzene-(H2O)n Clusters (n = 1 through 7): Evidence for Noncyclic (H2O)n Structures , 1994, Science.

[38]  D. Feller Ab Initio Study of M+:18-Crown-6 Microsolvation , 1997 .

[39]  T. Ebata Study on the Structure and Vibrational Dynamics of Functional Molecules and Molecular Clusters by Double Resonance Vibrational Spectroscopy , 2009 .

[40]  H. K. Frensdorff,et al.  Macrocyclic polyethers and their complexes. , 1972, Angewandte Chemie.

[41]  H. Matsuura,et al.  Hydrogen Bonding in Chloroform Solutions of Ethylenedioxy Ethers. Spectroscopic Evidence of Bifurcated Hydrogen Bonds , 2001 .

[42]  T. Ebata,et al.  Laser spectroscopic study on the conformations and the hydrated structures of benzo-18-crown-6-ether and dibenzo-18-crown-6-ether in supersonic jets. , 2007, Physical chemistry chemical physics : PCCP.

[43]  T. Zwier,et al.  IR-IR-UV hole-burning: conformation specific IR spectra in the face of UV spectral overlap. , 2007, Journal of Physical Chemistry A.

[44]  T. Ebata,et al.  Structure of hydrated clusters of dibenzo-18-crown-6-ether in a supersonic jet--encapsulation of water molecules in the crown cavity. , 2008, Physical chemistry chemical physics : PCCP.

[45]  S. Xantheas,et al.  Encapsulation of Ar(n) complexes by calix[4]arene: endo- vs. exo-complexes. , 2010, Physical chemistry chemical physics : PCCP.

[46]  T. Ebata,et al.  Water-mediated conformer optimization in benzo-18-crown-6-ether/water system. , 2009, Physical chemistry chemical physics : PCCP.

[47]  M. Thompson,et al.  An Ab Initio Investigation of the Structure and Alkali Metal Cation Selectivity of 18-Crown-6 , 1994 .

[48]  G. Gokel Crown Ethers and Cryptands , 1991 .

[49]  Jason D. Rodriguez,et al.  Infrared spectroscopy of gas-phase hydrated K+:18-crown-6 complexes: Evidence for high energy conformer trapping using the argon tagging method , 2009 .

[50]  Z. Huang,et al.  High‐resolution near‐infrared spectroscopy of water dimer , 1989 .

[51]  M. Plesset,et al.  Note on an Approximation Treatment for Many-Electron Systems , 1934 .

[52]  J. Wessel,et al.  Excitonic interactions in naphthalene clusters , 1990 .

[53]  Sotiris S. Xantheas,et al.  On the importance of the fragment relaxation energy terms in the estimation of the basis set superposition error correction to the intermolecular interaction energy , 1996 .