Dissecting Pathway Disturbances Using Network Topology and Multi-platform Genomics Data
暂无分享,去创建一个
Hongyu Zhao | K. Baggerly | A. Shojaie | R. Shen | V. Baladandayuthapani | Z. Ouyang | Yuping Zhang | M. Linder | R. Shen | M. Henry Linder
[1] R. Tibshirani,et al. On testing the significance of sets of genes , 2006, math/0610667.
[2] P. Park,et al. Discovering statistically significant pathways in expression profiling studies. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[3] Mohammad Fallahi-Sichani,et al. Systematic analysis of BRAFV600E melanomas reveals a role for JNK/c-Jun pathway in adaptive resistance to drug-induced apoptosis , 2015 .
[4] Henryk Maciejewski,et al. Gene set analysis methods: statistical models and methodological differences , 2013, Briefings Bioinform..
[5] J. Blay,et al. Vemurafenib in Multiple Nonmelanoma Cancers with BRAF V600 Mutations. , 2015, The New England journal of medicine.
[6] G. Michailidis,et al. Network Enrichment Analysis in Complex Experiments , 2010, Statistical applications in genetics and molecular biology.
[7] Ali Shojaie,et al. Analysis of Gene Sets Based on the Underlying Regulatory Network , 2009, J. Comput. Biol..
[8] Pablo Tamayo,et al. Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[9] K. Tomczak,et al. The Cancer Genome Atlas (TCGA): an immeasurable source of knowledge , 2015, Contemporary oncology.
[10] Qi Liu,et al. BMC Bioinformatics BioMed Central Methodology article Comparative evaluation of gene-set analysis methods , 2007 .
[11] Lu Liu,et al. Network-based pathway enrichment analysis , 2013, 2013 IEEE International Conference on Bioinformatics and Biomedicine.
[12] Jing Ma,et al. Network-based pathway enrichment analysis with incomplete network information , 2014, Bioinform..
[13] Di Wu,et al. ROAST: rotation gene set tests for complex microarray experiments , 2010, Bioinform..
[14] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .