Retraction to: A complex evolutionary relationship between HHV-6A and HHV-6B

[This retracts the article DOI: 10.1093/ve/vez043.].

[1]  M. Boeckh,et al.  Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6 , 2018, BMC Genomics.

[2]  Meei-Li W Huang,et al.  Copy Number Heterogeneity, Large Origin Tandem Repeats, and Interspecies Recombination in Human Herpesvirus 6A (HHV-6A) and HHV-6B Reference Strains , 2018, Journal of Virology.

[3]  B. Sandmaier,et al.  Outcomes of hematopoietic cell transplantation using donors or recipients with inherited chromosomally integrated HHV-6. , 2017, Blood.

[4]  R. Neumann,et al.  Inherited Chromosomally Integrated Human Herpesvirus 6 Genomes Are Ancient, Intact, and Potentially Able To Reactivate from Telomeres , 2017, Journal of Virology.

[5]  H. Kurahashi,et al.  Analysis of the origin of inherited chromosomally integrated human herpesvirus 6 in the Japanese population. , 2017, The Journal of general virology.

[6]  L. Flamand,et al.  HHV-6A/B Integration and the Pathogenesis Associated with the Reactivation of Chromosomally Integrated HHV-6A/B , 2017, Viruses.

[7]  G. Boivin,et al.  Cell Culture Systems To Study Human Herpesvirus 6A/B Chromosomal Integration , 2017, Journal of Virology.

[8]  D. Clark,et al.  Clinical and laboratory features of human herpesvirus 6 chromosomal integration. , 2016, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

[9]  U. Gompels,et al.  Complete Genome Sequence of Germline Chromosomally Integrated Human Herpesvirus 6A and Analyses Integration Sites Define a New Human Endogenous Virus with Potential to Reactivate as an Emerging Infection , 2016, Viruses.

[10]  M. Jakobsson,et al.  Clumpak: a program for identifying clustering modes and packaging population structure inferences across K , 2015, Molecular ecology resources.

[11]  B. Das A Neonate with Acute Heart Failure: Chromosomally Integrated Human Herpesvirus 6-Associated Dilated Cardiomyopathy. , 2015, The Journal of pediatrics.

[12]  G. Morissette,et al.  Inherited chromosomally integrated human herpesvirus 6 as a predisposing risk factor for the development of angina pectoris , 2015, Proceedings of the National Academy of Sciences.

[13]  P. Pellett,et al.  Roseolovirus molecular biology: recent advances. , 2014, Current opinion in virology.

[14]  B. Kaufer,et al.  Chromosomally integrated HHV-6: impact on virus, cell and organismal biology. , 2014, Current opinion in virology.

[15]  J. Hill,et al.  Roseoloviruses in transplant recipients: clinical consequences and prospects for treatment and prevention trials. , 2014, Current opinion in virology.

[16]  L. Epstein,et al.  Clinical impact of primary infection with roseoloviruses. , 2014, Current opinion in virology.

[17]  Alimuddin Zumla,et al.  Prevalence and risk factors for betaherpesvirus DNAemia in children >3 weeks and <2 years of age admitted to a large referral hospital in sub-Saharan Africa. , 2014, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[18]  Arvind Varsani,et al.  SDT: A Virus Classification Tool Based on Pairwise Sequence Alignment and Identity Calculation , 2014, PloS one.

[19]  T. Morio,et al.  Molecular and virological evidence of viral activation from chromosomally integrated human herpesvirus 6A in a patient with X-linked severe combined immunodeficiency. , 2014, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[20]  H. Agut,et al.  Classification of HHV-6A and HHV-6B as distinct viruses , 2014, Archives of Virology.

[21]  M. Lercher,et al.  PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R , 2014, Molecular biology and evolution.

[22]  J. Reynaud,et al.  Human Herpesvirus 6A Infection in CD46 Transgenic Mice: Viral Persistence in the Brain and Increased Production of Proinflammatory Chemokines via Toll-Like Receptor 9 , 2014, Journal of Virology.

[23]  C. Hall,et al.  Sequence analysis of transplacentally acquired human herpesvirus 6 DNA is consistent with transmission of a chromosomally integrated reactivated virus. , 2013, The Journal of infectious diseases.

[24]  K. Katoh,et al.  MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability , 2013, Molecular biology and evolution.

[25]  D. Reich,et al.  Novel Marmoset (Callithrix jacchus) Model of Human Herpesvirus 6A and 6B Infections: Immunologic, Virologic and Radiologic Characterization , 2013, PLoS pathogens.

[26]  J. Takanashi,et al.  Epidemiology of acute encephalopathy in Japan, with emphasis on the association of viruses and syndromes , 2012, Brain and Development.

[27]  J. Bielawski,et al.  Recombination Detection Under Evolutionary Scenarios Relevant to Functional Divergence , 2011, Journal of Molecular Evolution.

[28]  R. Henkin,et al.  Human herpesvirus-6 entry into the central nervous system through the olfactory pathway , 2011, Proceedings of the National Academy of Sciences.

[29]  F. Balloux,et al.  Discriminant analysis of principal components: a new method for the analysis of genetically structured populations , 2010, BMC Genetics.

[30]  J. Jaworska,et al.  Divergent susceptibilities of human herpesvirus 6 variants to type I interferons , 2010, Proceedings of the National Academy of Sciences.

[31]  Jesse H. Arbuckle,et al.  The latent human herpesvirus-6A genome specifically integrates in telomeres of human chromosomes in vivo and in vitro , 2010, Proceedings of the National Academy of Sciences.

[32]  D. Clark,et al.  Predominant human herpesvirus 6 variant A infant infections in an HIV‐1 endemic region of Sub‐Saharan Africa , 2009, Journal of medical virology.

[33]  H. Leong,et al.  Human herpesvirus 6 integrates within telomeric regions as evidenced by five different chromosomal Sites , 2008, Journal of medical virology.

[34]  Thibaut Jombart,et al.  adegenet: a R package for the multivariate analysis of genetic markers , 2008, Bioinform..

[35]  D. Huson,et al.  Application of phylogenetic networks in evolutionary studies. , 2006, Molecular biology and evolution.

[36]  E. Major,et al.  Variant-Specific Tropism of Human Herpesvirus 6 in Human Astrocytes , 2005, Journal of Virology.

[37]  G. Evanno,et al.  Detecting the number of clusters of individuals using the software structure: a simulation study , 2005, Molecular ecology.

[38]  H. Kurahashi,et al.  Human herpesvirus 6 (HHV‐6) is transmitted from parent to child in an integrated form and characterization of cases with chromosomally integrated HHV‐6 DNA , 2004, Journal of medical virology.

[39]  M. Stephens,et al.  Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. , 2003, Genetics.

[40]  K. Crandall,et al.  Evaluation of methods for detecting recombination from DNA sequences: Computer simulations , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[41]  Bernhard Haubold,et al.  LIAN 3.0: detecting linkage disequilibrium in multilocus data , 2000, Bioinform..

[42]  Darren Martin,et al.  RDP: detection of recombination amongst aligned sequences , 2000, Bioinform..

[43]  P. Donnelly,et al.  Inference of population structure using multilocus genotype data. , 2000, Genetics.

[44]  N. Inoue,et al.  Human Herpesvirus 6B Genome Sequence: Coding Content and Comparison with Human Herpesvirus 6A , 1999, Journal of Virology.

[45]  H. Taguchi,et al.  Inheritance of chromosomally integrated human herpesvirus 6 DNA. , 1999, Blood.

[46]  K. Lole,et al.  Full-Length Human Immunodeficiency Virus Type 1 Genomes from Subtype C-Infected Seroconverters in India, with Evidence of Intersubtype Recombination , 1999, Journal of Virology.

[47]  F. Kasolo,et al.  Infection with AIDS-related herpesviruses in human immunodeficiency virus-negative infants and endemic childhood Kaposi's sarcoma in Africa. , 1997, The Journal of general virology.

[48]  S. Ferrari,et al.  Three cases of human herpesvirus‐6 latent infection: Integration of viral genome in peripheral blood mononuclear cell DNA , 1993, Journal of medical virology.

[49]  John Maynard Smith,et al.  Analyzing the mosaic structure of genes , 1992, Journal of Molecular Evolution.

[50]  F. Tajima Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. , 1989, Genetics.

[51]  S. Sawyer Statistical tests for detecting gene conversion. , 1989, Molecular biology and evolution.

[52]  M. Nei,et al.  Mathematical model for studying genetic variation in terms of restriction endonucleases. , 1979, Proceedings of the National Academy of Sciences of the United States of America.

[53]  G. A. Watterson On the number of segregating sites in genetical models without recombination. , 1975, Theoretical population biology.

[54]  Ben Murrell,et al.  Detecting and Analyzing Genetic Recombination Using RDP4. , 2017, Methods in molecular biology.

[55]  O. Gascuel,et al.  Estimating maximum likelihood phylogenies with PhyML. , 2009, Methods in molecular biology.