Metabolic flux analysis of the hydrogen production potential in Synechocystis sp. PCC6803

Hydrogen is a promising energy vector; however, finding methods to produce it from renewable sources is essential to allow its wide-scale use. In that line, biological hydrogen production, although it is considered as a possible alternative, requires substantial improvements to overcome its present low yields. In that direction, genetic manipulation probably will play a central role and from that point of view metabolic flux analysis (MFA) constitutes an important tool to guide a priori most suitable genetic modifications oriented to a hydrogen yield increase. In this work MFA has been applied to analyze hydrogen photoproduction of Synechocystis sp. PCC6803. Flux analysis was carried out based on literature data and several basic fluxes were estimated in different growing conditions of the system. From this analysis, an upper limit for hydrogen photoproduction has been determined indicating a wide margin for improvement. MFA was also used to find a feasible operating space for hydrogen production, which avoids oxygen inhibition, one of the most important limitations to make hydrogen production cost effective. In addition, a set of biotechnological strategies are proposed that would be consistent with the performed mathematical analysis.

[1]  M. Klingenberg,et al.  Uncoupling protein, H+ transport and regulation. , 2001, Biochemical Society transactions.

[2]  B. Kroposki,et al.  Renewable hydrogen production , 2008 .

[3]  John Allen,et al.  Photosynthesis of ATP—Electrons, Proton Pumps, Rotors, and Poise , 2002, Cell.

[4]  R. Rippka,et al.  Metabolism of glucose by unicellular blue-green algae , 2004, Archiv für Mikrobiologie.

[5]  Matthew R Melnicki,et al.  Integrated biological hydrogen production , 2006 .

[6]  Debabrata Das,et al.  Continuous hydrogen production by immobilized Enterobacter cloacae IIT-BT 08 using lignocellulosic materials as solid matrices. , 2001 .

[7]  P. Lindblad,et al.  A brief look at three decades of research on cyanobacterial hydrogen evolution , 2002 .

[8]  M. Ghirardi,et al.  Sustained hydrogen photoproduction by Chlamydomonas reinhardtii: Effects of culture parameters. , 2002 .

[9]  Chen Yang,et al.  Metabolic flux analysis in Synechocystis using isotope distribution from 13C-labeled glucose. , 2002, Metabolic engineering.

[10]  John A Morgan,et al.  Flux Balance Analysis of Photoautotrophic Metabolism , 2005, Biotechnology progress.

[11]  Peter Lindblad,et al.  Realizing the hydrogen future: the International Energy Agency's efforts to advance hydrogen energy technologies , 2003 .

[12]  Paula Tamagnini,et al.  Hydrogenases and Hydrogen Metabolism of Cyanobacteria , 2002, Microbiology and Molecular Biology Reviews.

[13]  E. Rial,et al.  The mitochondrial uncoupling proteins , 2002, Genome Biology.

[14]  John R. Benemann,et al.  Biological hydrogen production , 1995 .

[15]  P Albertsson,et al.  A quantitative model of the domain structure of the photosynthetic membrane. , 2001, Trends in plant science.

[16]  S. Polasky,et al.  Environmental, economic, and energetic costs and benefits of biodiesel and ethanol biofuels. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[17]  R. Izaurralde,et al.  Science Needs and New Technology for Increasing Soil Carbon Sequestration , 2001 .

[18]  P. Takahashi,et al.  Biophotolysis-based Hydrogen Production by Cyanobacteria and Green Microalgae , 2007 .

[19]  Patrick C. Hallenbeck,et al.  Biological hydrogen production; fundamentals and limiting processes , 2002 .

[20]  Takakazu Kaneko,et al.  CyanoBase, a www database containing the complete nucleotide sequence of the genome of Synechocystis sp. strain PCC6803 , 1998, Nucleic Acids Res..

[21]  H. GAFFRON,et al.  Reduction of Carbon Dioxide with Molecular Hydrogen in Green Algæ , 1939, Nature.

[22]  J. Appel,et al.  Inhibition of respiration and nitrate assimilation enhances photohydrogen evolution under low oxygen concentrations in Synechocystis sp. PCC 6803. , 2007, Biochimica et biophysica acta.

[23]  A. Moya,et al.  Yeast cultures with UCP1 uncoupling activity as a heating device. , 2009, New biotechnology.

[24]  Y. Chisti,et al.  A mechanistic model of photosynthesis in microalgae. , 2003, Biotechnology and bioengineering.

[25]  Rangan Banerjee,et al.  Metabolic flux analysis of biological hydrogen production by Escherichia coli , 2007 .

[26]  Patrik R. Jones Improving fermentative biomass-derived H2-production by engineering microbial metabolism , 2008 .

[27]  B. Palsson,et al.  Metabolic modelling of microbes: the flux-balance approach. , 2002, Environmental microbiology.

[28]  R. Heinrich,et al.  Metabolic Pathway Analysis: Basic Concepts and Scientific Applications in the Post‐genomic Era , 1999, Biotechnology progress.

[29]  R. Schulz,et al.  HYDROGEN METABOLISM IN ORGANISMS WITH OXYGENIC PHOTOSYNTHESIS : HYDROGENASES AS IMPORTANT REGULATORY DEVICES FOR A PROPER REDOX POISING? , 1998 .

[30]  Y. Yürüm Hydrogen Production Methods , 1995 .

[31]  Lucas J. Stal,et al.  Fermentation in cyanobacteria , 1997 .

[32]  B. Palsson,et al.  The Escherichia coli MG1655 in silico metabolic genotype: its definition, characteristics, and capabilities. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[33]  H. Bonarius,et al.  Flux analysis of underdetermined metabolic networks: the quest for the missing constraints. , 1997 .

[34]  Lu Zhang,et al.  Sustained photobiological hydrogen gas production upon reversible inactivation of oxygen evolution in the green alga Chlamydomonas reinhardtii. , 2000, Plant physiology.

[35]  D. O. Hall,et al.  Hydrogen metabolism of mutant forms of Anabaena variabilis in continuous cultures and under nutritional stress , 1997 .

[36]  T. Veziroglu,et al.  The properties of hydrogen as fuel tomorrow in sustainable energy system for a cleaner planet , 2005 .

[37]  Heung-Joo Kim,et al.  Metabolic-flux analysis of hydrogen production pathway in Citrobacter amalonaticus Y19 , 2008 .

[38]  Lawrence Pitt,et al.  Biohydrogen production: prospects and limitations to practical application , 2004 .

[39]  B. Palsson,et al.  Stoichiometric flux balance models quantitatively predict growth and metabolic by-product secretion in wild-type Escherichia coli W3110 , 1994, Applied and environmental microbiology.

[40]  Paulette M. Vignais,et al.  Sustained Photoevolution of Molecular Hydrogen in a Mutant of Synechocystis sp. Strain PCC 6803 Deficient in the Type I NADPH-Dehydrogenase Complex , 2004, Journal of bacteriology.

[41]  René H. Wijffels,et al.  Photobiological hydrogen production: photochemical e)ciency and bioreactor design , 2002 .

[42]  Y. Nakamura,et al.  Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions (supplement). , 1996, DNA research : an international journal for rapid publication of reports on genes and genomes.