A neurodevelopmental TUBB2B β-tubulin mutation impairs Bim1 (yeast EB1)-dependent spindle positioning

ABSTRACT Malformations of the human cerebral cortex can be caused by mutations in tubulins that associate to compose microtubules. Cerebral cortical folding relies on neuronal migration and on progenitor proliferation partly dictated by microtubule-dependent mitotic spindle positioning. A single amino acid change, F265L, in the conserved TUBB2B β-tubulin gene has been identified in patients with abnormal cortex formation. A caveat for studying this mutation in mammalian cells is that nine genes encode β-tubulin in human. Here, we generate a yeast strain expressing F265L tubulin mutant as the sole source of β-tubulin. The F265L mutation does not preclude expression of a stable β-tubulin protein which is incorporated into microtubules. However, impaired cell growth was observed at high temperatures along with altered microtubule dynamics and stability. In addition, F265L mutation produces a highly specific mitotic spindle positioning defect related to Bim1 (yeast EB1) dysfunction. Indeed, F265L cells display an abnormal Bim1 recruitment profile at microtubule plus-ends. These results indicate that the F265L β-tubulin mutation affects microtubule plus-end complexes known to be important for microtubule dynamics and for microtubule function during mitotic spindle positioning. Summary: Patients with intellectual disabilities carry a F265L mutation in TUBB2B β-tubulin gene. Yeast used as a cellular model reveals spindle mis-positioning associated with reduced yeast EB1 affinity for microtubule plus-ends.

[1]  A. Andrieux,et al.  CAP-Gly proteins contribute to microtubule-dependent trafficking via interactions with the C-terminal aromatic residue of α-tubulin , 2017, Small GTPases.

[2]  R. Vallee,et al.  Nuclear migration in mammalian brain development. , 2017, Seminars in cell & developmental biology.

[3]  Joseph Atherton,et al.  Tubulin isoform composition tunes microtubule dynamics , 2017, Molecular biology of the cell.

[4]  J. Howard,et al.  Physical Limits on the Precision of Mitotic Spindle Positioning by Microtubule Pushing forces , 2017, BioEssays : news and reviews in molecular, cellular and developmental biology.

[5]  E. Nogales,et al.  Structural differences between yeast and mammalian microtubules revealed by cryo-EM , 2017, The Journal of cell biology.

[6]  Jeffrey K. Moore,et al.  Dynein is regulated by the stability of its microtubule track , 2017, The Journal of cell biology.

[7]  Lewis D. Griffin,et al.  Steady-state EB cap size fluctuations are determined by stochastic microtubule growth and maturation , 2017, Proceedings of the National Academy of Sciences.

[8]  A. Haghiri-Gosnet,et al.  Localized Mechanical Stress Promotes Microtubule Rescue , 2016, Current Biology.

[9]  Xavier Morin,et al.  Regulation of mitotic spindle orientation: an integrated view , 2016, EMBO reports.

[10]  T. Surrey,et al.  The size of the EB cap determines instantaneous microtubule stability , 2016, eLife.

[11]  C. Hoogenraad,et al.  Microtubule plus-end tracking proteins in neuronal development , 2016, Cellular and Molecular Life Sciences.

[12]  S. M. Markus,et al.  The dynein cortical anchor Num1 activates dynein motility by relieving Pac1/LIS1-mediated inhibition , 2015, The Journal of cell biology.

[13]  F. Bradke,et al.  Coordinating Neuronal Actin–Microtubule Dynamics , 2015, Current Biology.

[14]  M. Kollmar,et al.  Six Subgroups and Extensive Recent Duplications Characterize the Evolution of the Eukaryotic Tubulin Protein Family , 2014, Genome biology and evolution.

[15]  Michel O. Steinmetz,et al.  Reconstitution of a hierarchical +TIP interaction network controlling microtubule end tracking of dynein , 2014, Nature Cell Biology.

[16]  N. Boddaert,et al.  The wide spectrum of tubulinopathies: what are the key features for the diagnosis? , 2014, Brain : a journal of neurology.

[17]  T. Mitchison The Engine of Microtubule Dynamics Comes into Focus , 2014, Cell.

[18]  D. Baker,et al.  High-Resolution Microtubule Structures Reveal the Structural Transitions in αβ-Tubulin upon GTP Hydrolysis , 2014, Cell.

[19]  R. Vale,et al.  Regulation of microtubule motors by tubulin isotypes and posttranslational modifications , 2014, Nature Cell Biology.

[20]  Gergő Bohner,et al.  EB1 Accelerates Two Conformational Transitions Important for Microtubule Maturation and Dynamics , 2014, Current Biology.

[21]  Wei-Lih Lee,et al.  She1-Mediated Inhibition of Dynein Motility along Astral Microtubules Promotes Polarized Spindle Movements , 2012, Current Biology.

[22]  Wei-Lih Lee,et al.  Astral microtubule asymmetry provides directional cues for spindle positioning in budding yeast. , 2012, Experimental cell research.

[23]  Gergő Bohner,et al.  EBs Recognize a Nucleotide-Dependent Structural Cap at Growing Microtubule Ends , 2012, Cell.

[24]  B. Link,et al.  Cell biological regulation of division fate in vertebrate neuroepithelial cells , 2011, Developmental dynamics : an official publication of the American Association of Anatomists.

[25]  L. Cassimeris,et al.  Regulation of Microtubule Dynamics by Bim1 and Bik1, the Budding Yeast Members of the EB1 and CLIP-170 Families of Plus-End Tracking Proteins , 2010, Molecular biology of the cell.

[26]  M. Leroux,et al.  Quality control of cytoskeletal proteins and human disease. , 2010, Trends in biochemical sciences.

[27]  J. Cooper,et al.  Function of dynein in budding yeast: mitotic spindle positioning in a polarized cell. , 2009, Cell motility and the cytoskeleton.

[28]  A. Represa,et al.  Mutations in the β-tubulin gene TUBB2B result in asymmetrical polymicrogyria , 2009, Nature Genetics.

[29]  Chris Q. Doe,et al.  Spindle orientation during asymmetric cell division , 2009, Nature Cell Biology.

[30]  Franck Perez,et al.  Detection of GTP-Tubulin Conformation in Vivo Reveals a Role for GTP Remnants in Microtubule Rescues , 2008, Science.

[31]  A. Andrieux,et al.  A new role for kinesin-directed transport of Bik1p (CLIP-170) in Saccharomyces cerevisiae , 2008, Journal of Cell Science.

[32]  W. Zhong,et al.  Neurogenesis and asymmetric cell division , 2008, Current Opinion in Neurobiology.

[33]  Sue Povey,et al.  A revised nomenclature for the human and rodent alpha-tubulin gene family. , 2007, Genomics.

[34]  R. Vallee,et al.  Dual subcellular roles for LIS1 and dynein in radial neuronal migration in live brain tissue , 2007, Nature Neuroscience.

[35]  G. Lansbergen,et al.  Microtubule Plus End: A Hub of Cellular Activities , 2006, Traffic.

[36]  Mohan L Gupta,et al.  Cell cycle control of kinesin-mediated transport of Bik1 (CLIP-170) regulates microtubule stability and dynein activation. , 2004, Developmental cell.

[37]  M. Bornens,et al.  Suppression of nuclear oscillations in Saccharomyces cerevisiae expressing Glu tubulin. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[38]  Y. Barral,et al.  Spindle orientation in Saccharomyces cerevisiae depends on the transport of microtubule ends along polarized actin cables , 2003, The Journal of cell biology.

[39]  Pedro Carvalho,et al.  Determinants of S. cerevisiae Dynein Localization and Activation Implications for the Mechanism of Spindle Positioning , 2003, Current Biology.

[40]  C. Hoogenraad,et al.  LIS1, CLIP-170's Key to the Dynein/Dynactin Pathway , 2002, Molecular and Cellular Biology.

[41]  G. Fink,et al.  Polyploids require Bik1 for kinetochore–microtubule attachment , 2001, The Journal of cell biology.

[42]  E. Salmon,et al.  Control of microtubule dynamics by Stu2p is essential for spindle orientation and metaphase chromosome alignment in yeast. , 2001, Molecular biology of the cell.

[43]  K. Bloom,et al.  The role of the proteins Kar9 and Myo2 in orienting the mitotic spindle of budding yeast , 2000, Current Biology.

[44]  E. Salmon,et al.  Dynamic positioning of mitotic spindles in yeast: role of microtubule motors and cortical determinants. , 2000, Molecular biology of the cell.

[45]  M. Rose,et al.  Bim1p/Yeb1p mediates the Kar9p-dependent cortical attachment of cytoplasmic microtubules. , 2000, Molecular biology of the cell.

[46]  Anthony Bretscher,et al.  Myosin V orientates the mitotic spindle in yeast , 2000, Nature.

[47]  D. Pellman,et al.  Positioning of the mitotic spindle by a cortical-microtubule capture mechanism. , 2000, Science.

[48]  E. O'Toole,et al.  Yeast Bim1p Promotes the G1-specific Dynamics of Microtubules , 1999, The Journal of cell biology.

[49]  M. Rose,et al.  Kar9p Is a Novel Cortical Protein Required for Cytoplasmic Microtubule Orientation in Yeast , 1998, The Journal of cell biology.

[50]  Kenneth H. Downing,et al.  Structure of the αβ tubulin dimer by electron crystallography , 1998, Nature.

[51]  D. Botstein,et al.  BIM1 encodes a microtubule-binding protein in yeast. , 1997, Molecular biology of the cell.

[52]  D. Pellman,et al.  Kinesin-related KIP3 of Saccharomyces cerevisiae Is Required for a Distinct Step in Nuclear Migration , 1997, The Journal of cell biology.

[53]  R. Luduena Are tubulin isotypes functionally significant. , 1993, Molecular biology of the cell.

[54]  D. Botstein,et al.  Two functional alpha-tubulin genes of the yeast Saccharomyces cerevisiae encode divergent proteins , 1986, Molecular and cellular biology.

[55]  D. Pantaloni,et al.  Involvement of Guanosine Triphosphate (GTP) Hydrolysis in the Mechanism of Tubulin Polymerization: Regulation of Microtubule Dynamics at Steady State by a GTP Cap , 1986, Annals of the New York Academy of Sciences.

[56]  D. Botstein,et al.  Isolation and Characterization of Mutations in the β-Tubulin Gene of SACCHAROMYCES CEREVISIAE , 1985 .

[57]  M. Kirschner,et al.  Microtubule assembly nucleated by isolated centrosomes , 1984, Nature.

[58]  T. L. Hill,et al.  Interference of GTP hydrolysis in the mechanism of microtubule assembly: an experimental study. , 1984, Proceedings of the National Academy of Sciences of the United States of America.