Exponential Hermite splines for the analysis of biomedical images

We present a new exponential B-spline basis that enables the construction of active contours for the analysis of biomedical images. Our functions generalize the well-known polynomial Hermite B-splines and provide us with a direct control over the tangents of the parameterized contour, which is absent in traditional spline-based active contours. Our basis functions have been designed to perfectly reproduce elliptical and circular shapes. Moreover, they can approximate any closed curve up to arbitrary precision by increasing the number of anchor points. They are therefore well-suited to the segmentation of the roundish objects that are commonly encountered in the analysis of bioimages. We illustrate the performance of an active contour built using our functions on some examples of real biological data.

[1]  Michael Unser,et al.  Snakes with Ellipse-Reproducing Property , 2011 .

[2]  Anil K. Jain,et al.  Deformable template models: A review , 1998, Signal Process..

[3]  M. Unser Sampling-50 years after Shannon , 2000, Proceedings of the IEEE.

[4]  Akshay K. Singh,et al.  Deformable models in medical image analysis , 1996, Proceedings of the Workshop on Mathematical Methods in Biomedical Image Analysis.

[5]  I. J. Schoenberg,et al.  Cardinal interpolation and spline functions , 1969 .

[6]  Demetri Terzopoulos,et al.  Snakes: Active contour models , 2004, International Journal of Computer Vision.

[7]  W. Dahmen,et al.  Biorthogonal Multiwavelets on the Interval: Cubic Hermite Splines , 2000 .

[8]  Michael Unser,et al.  Spline-based framework for interactive segmentation in biomedical imaging , 2013 .

[9]  I. J. Schoenberg,et al.  Cardinal interpolation and spline functions. III. Cardinal Hermite interpolation , 1973 .

[10]  Michael D. Abràmoff,et al.  Image processing with ImageJ , 2004 .

[11]  P. Saint-Marc,et al.  Active contour models: overview, implementation and applications , 1990, 1990 IEEE International Conference on Systems, Man, and Cybernetics Conference Proceedings.