Classifying and ranking audio clips to support bird species richness surveys

Abstract Advances in programmable field acoustic sensors provide immense data for bird species study. Manually searching for bird species present in these acoustic data is time-consuming. Although automated techniques have been used for species recognition in many studies, currently these techniques are prone to error due to the complexity of natural acoustics. In this paper we propose a smart sampling approach to help identify the maximum number of bird species while listening to the minimum amount of acoustic data. This approach samples audio clips in a manner that can direct bird species surveys more efficiently. First, a classifier is built to remove audio clips that are unlikely to contain birds; second, the remaining audio clips are ranked by a proxy for the number of species. This technique enables a more efficient determination of species richness. The experimental results show that the use of a classifier enables to remove redundant acoustic data and make our approach resilient to various weather conditions. By ranking audio clips classified as “Birds”, our method outperforms the currently best published strategy for finding bird species after 30 one-minute audio clip samples. Particularly after 60 samples, our method achieves 10 percentage points more species. Despite our focus on bird species, the proposed sampling approach is applicable to the search of other vocal species.

[1]  Hermann Ney,et al.  Computing Mel-frequency cepstral coefficients on the power spectrum , 2001, 2001 IEEE International Conference on Acoustics, Speech, and Signal Processing. Proceedings (Cat. No.01CH37221).

[2]  Panu Somervuo,et al.  Parametric Representations of Bird Sounds for Automatic Species Recognition , 2006, IEEE Transactions on Audio, Speech, and Language Processing.

[3]  Luis J. Villanueva-Rivera,et al.  Using Automated Digital Recording Systems as Effective Tools for the Monitoring of Birds and Amphibians , 2006 .

[4]  A. L. Edwards,et al.  An introduction to linear regression and correlation. , 1985 .

[5]  P. Slater,et al.  Bird Song: Biological Themes and Variations , 1995 .

[6]  B. Altman,et al.  A habitat-based point-count protocol for terrestrial birds, emphasizing Washington and Oregon. , 2000 .

[7]  Seppo Ilmari Fagerlund,et al.  Bird Species Recognition Using Support Vector Machines , 2007, EURASIP J. Adv. Signal Process..

[8]  Vincent Carignan,et al.  Selecting Indicator Species to Monitor Ecological Integrity: A Review , 2002, Environmental monitoring and assessment.

[9]  Paul Roe,et al.  Sampling environmental acoustic recordings to determine bird species richness. , 2013, Ecological applications : a publication of the Ecological Society of America.

[10]  Peter Fedor,et al.  A tribute to Claude Shannon (1916-2001) and a plea for more rigorous use of species richness, species diversity and the 'Shannon-Wiener' Index , 2003 .

[11]  Shrikanth Narayanan,et al.  Environmental Sound Recognition With Time–Frequency Audio Features , 2009, IEEE Transactions on Audio, Speech, and Language Processing.

[12]  Paul Roe,et al.  Clustering Acoustic Events in Environmental Recordings for Species Richness Surveys , 2015, ICCS.

[13]  Michael W. Towsey,et al.  Visualization of Long-duration Acoustic Recordings of the Environment , 2014, ICCS.

[14]  Paul Roe,et al.  Practical Analysis of Big Acoustic Sensor Data for Environmental Monitoring , 2014, 2014 IEEE Fourth International Conference on Big Data and Cloud Computing.

[15]  Nadia Pieretti,et al.  Acoustic Indices for Biodiversity Assessment and Landscape Investigation , 2014 .

[16]  Sandrine Pavoine,et al.  Rapid Acoustic Survey for Biodiversity Appraisal , 2008, PloS one.

[17]  Xiaoli Z. Fern,et al.  Acoustic classification of multiple simultaneous bird species: a multi-instance multi-label approach. , 2012, The Journal of the Acoustical Society of America.

[18]  Frank Kurth,et al.  Detecting bird sounds in a complex acoustic environment and application to bioacoustic monitoring , 2010, Pattern Recognit. Lett..

[19]  M. Bonsall,et al.  Measuring biodiversity to explain community assembly: a unified approach , 2011, Biological reviews of the Cambridge Philosophical Society.

[20]  Paul Roe,et al.  The use of acoustic indices to determine avian species richness in audio-recordings of the environment , 2014, Ecol. Informatics.

[21]  Sacha Krstulovic,et al.  Mptk: Matching Pursuit Made Tractable , 2006, 2006 IEEE International Conference on Acoustics Speech and Signal Processing Proceedings.

[22]  Mark A. Hall,et al.  Correlation-based Feature Selection for Machine Learning , 2003 .

[23]  Paul Roe,et al.  A Novel Representation of Bioacoustic Events for Content-Based Search in Field Audio Data , 2013, 2013 International Conference on Digital Image Computing: Techniques and Applications (DICTA).

[24]  Philip K. McKinley,et al.  Ensemble extraction for classification and detection of bird species , 2010, Ecol. Informatics.

[25]  Almo Farina,et al.  A new methodology to infer the singing activity of an avian community: The Acoustic Complexity Index (ACI) , 2011 .

[26]  Anne E. Magurran,et al.  Biological Diversity: Frontiers in Measurement and Assessment , 2011 .

[27]  Ian H. Witten,et al.  The WEKA data mining software: an update , 2009, SKDD.

[28]  David C. Schneider,et al.  Quantitative Ecology: Spatial and Temporal Scaling , 1994 .