Uncertainty-aware Brain Lesion Visualization

A brain lesion is an area of tissue that has been damaged through injury or disease. Its analysis is an essential task for medical researchers to understand diseases and find proper treatments. In this context, visualization approaches became an important tool to locate, quantify, and analyze brain lesions. Unfortunately, image uncertainty highly effects the accuracy of the visualization output. These effects are not covered well in existing approaches, leading to miss-interpretation or a lack of trust in the analysis result. In this work, we present an uncertainty-aware visualization pipeline especially designed for brain lesions. Our method is based on an uncertainty measure for image data that forms the input of an uncertainty-aware segmentation approach. Here, medical doctors can determine the lesion in the patient’s brain and the result can be visualized by an uncertainty-aware geometry rendering. We applied our approach to two patient datasets to review the lesions. Our results indicate increased knowledge discovery in brain lesion analysis that provides a quantification of trust in the generated results.

[1]  Martin Cenek,et al.  Survey of Image Processing Techniques for Brain Pathology Diagnosis: Challenges and Opportunities , 2018, Front. Robot. AI.

[2]  Ziad A. Alqadi,et al.  Salt and Pepper Noise: Effects and Removal , 2018, JOIV : International Journal on Informatics Visualization.

[3]  Hans Hagen,et al.  An Uncertainty-aware Workflow for Keyhole Surgery Planning using Hierarchical Image Semantics , 2018, Vis. Informatics.

[4]  Hans-Christian Hege,et al.  Exploring Uncertainty in Image Segmentation Ensembles , 2018, EuroVis.

[5]  Tomas Knapen,et al.  Porcupine: a visual pipeline tool for neuroimaging analysis , 2017 .

[6]  Daniel A. Keim,et al.  The Role of Uncertainty, Awareness, and Trust in Visual Analytics , 2016, IEEE Transactions on Visualization and Computer Graphics.

[7]  Laurent Mouchard,et al.  Dealing with uncertainty and imprecision in image segmentation using belief function theory , 2014, Int. J. Approx. Reason..

[8]  Paul Rosen,et al.  From Quantification to Visualization: A Taxonomy of Uncertainty Visualization Approaches , 2011, WoCoUQ.

[9]  H. Irshad,et al.  Image segmentation using fuzzy clustering: A survey , 2010, 2010 6th International Conference on Emerging Technologies (ICET).

[10]  Kristof Teelen Geometric uncertainty models for correspondence problems in digital image processing , 2010 .

[11]  Olaf Sporns,et al.  Modeling the Impact of Lesions in the Human Brain , 2009, PLoS Comput. Biol..

[12]  Pawel Drapikowski Surface modeling - Uncertainty estimation and visualization , 2008, Comput. Medical Imaging Graph..

[13]  J. Weber The Conclusions of Gestalt Psychology and Its Limitations , 2002 .

[14]  R. Born,et al.  Segregation of Object and Background Motion in Visual Area MT Effects of Microstimulation on Eye Movements , 2000, Neuron.

[15]  James S. Duncan,et al.  Medical Image Analysis , 1999, IEEE Pulse.

[16]  G. Marchal,et al.  Image segmentation: methods and applications in diagnostic radiology and nuclear medicine. , 1993, European journal of radiology.

[17]  William E. Lorensen,et al.  Marching cubes: A high resolution 3D surface construction algorithm , 1987, SIGGRAPH.