Cross-disorder GWAS meta-analysis for Attention Deficit/Hyperactivity Disorder, Autism Spectrum Disorder, Obsessive Compulsive Disorder, and Tourette Syndrome

Attention Deficit/Hyperactivity Disorder (ADHD), Autism Spectrum Disorder (ASD), Obsessive-Compulsive Disorder (OCD), and Tourette Syndrome (TS) are among the most prevalent neurodevelopmental psychiatric disorders of childhood and adolescence. High comorbidity rates across these four disorders point toward a common etiological thread that could be connecting them across the repetitive behaviors-impulsivity-compulsivity continuum. Aiming to uncover the shared genetic basis across ADHD, ASD, OCD, and TS, we undertake a systematic cross-disorder meta-analysis, integrating summary statistics from all currently available genome-wide association studies (GWAS) for these disorders, as made available by the Psychiatric Genomics Consortium (PGC) and the Lundbeck Foundation Initiative for Integrative Psychiatric Research (iPSYCH). We present analysis of a combined dataset of 93,294 individuals, across 6,788,510 markers and investigate associations on the single-nucleotide polymorphism (SNP), gene and pathway levels across all four disorders but also pairwise. In the ADHD-ASD-OCD-TS cross disorder GWAS meta-analysis, we uncover in total 297 genomewide significant variants from six LD (linkage disequilibrium) -independent genomic risk regions. Out of these genomewide significant association results, 199 SNPs, that map onto four genomic regions, show high posterior probability for association with at least three of the studied disorders (m-value>0.9). Gene-based GWAS meta-analysis across ADHD, ASD, OCD, and TS identified 21 genes significantly associated under Bonferroni correction. Out of those, 15 could not be identified as significantly associated based on the individual disorder GWAS dataset, indicating increased power in the cross-disorder comparisons. Cross-disorder tissue-specificity analysis implicates the Hypothalamus-Pituitary-Adrenal axis (stress response) as possibly underlying shared pathophysiology across ADHD, ASD, OCD, and TS. Our work highlights genetic variants and genes that may contribute to overlapping neurobiology across the four studied disorders and highlights the value of re-defining the framework for the study across this spectrum of highly comorbid disorders, by using transdiagnostic approaches.

[1]  L. Vissers,et al.  Mutations in the chromatin modifier gene KANSL1 cause the 17q21.31 microdeletion syndrome , 2012, Nature Genetics.

[2]  Nicola J. Rinaldi,et al.  Genetic effects on gene expression across human tissues , 2017, Nature.

[3]  T. Willnow,et al.  VPS10P-domain receptors — regulators of neuronal viability and function , 2008, Nature Reviews Neuroscience.

[4]  H. Stefánsson,et al.  Interrogating the Genetic Determinants of Tourette's Syndrome and Other Tic Disorders Through Genome-Wide Association Studies. , 2019, The American journal of psychiatry.

[5]  M. Jensen,et al.  The sorting receptor SorCS3 is a stronger regulator of glutamate receptor functions compared to GABAergic mechanisms in the hippocampus , 2017, Hippocampus.

[6]  D. G. Pestov,et al.  5′-end surveillance by Xrn2 acts as a shared mechanism for mammalian pre-rRNA maturation and decay , 2010, Nucleic acids research.

[7]  U. Rajamma,et al.  Glutamate mediated signaling in the pathophysiology of autism spectrum disorders , 2012, Pharmacology Biochemistry and Behavior.

[8]  G. Petsko,et al.  Retromer in Alzheimer disease, Parkinson disease and other neurological disorders , 2015, Nature Reviews Neuroscience.

[9]  C. Vaegter,et al.  Sortilin-Related Receptor SORCS3 Is a Postsynaptic Modulator of Synaptic Depression and Fear Extinction , 2013, PloS one.

[10]  I. Hertz-Picciotto,et al.  A meta-analysis of two high-risk prospective cohort studies reveals autism-specific transcriptional changes to chromatin, autoimmune, and environmental response genes in umbilical cord blood , 2018, bioRxiv.

[11]  H. Engeland,et al.  Hypothalamic-pituitary-adrenal axis and autonomic nervous system activity in disruptive children and matched controls. , 2000, Journal of the American Academy of Child and Adolescent Psychiatry.

[12]  P. Paschou,et al.  The Genetics of Gilles de la Tourette Syndrome: a Common Aetiological Basis with Comorbid Disorders? , 2016, Current Behavioral Neuroscience Reports.

[13]  Ian J. Deary,et al.  Association analysis in over 329,000 individuals identifies 116 independent variants influencing neuroticism , 2017, Nature Genetics.

[14]  Jianxin Shi,et al.  Genetic relationship between five psychiatric disorders estimated from genome-wide SNPs , 2013, Nature Genetics.

[15]  P. Paschou,et al.  Gilles de la Tourette syndrome , 2017, Nature Reviews Disease Primers.

[16]  P. Visscher,et al.  Multi-trait analysis of genome-wide association summary statistics using MTAG , 2017, Nature Genetics.

[17]  Y Wang,et al.  Genome-wide association study of obsessive-compulsive disorder , 2013, Molecular Psychiatry.

[18]  M. Nöthen,et al.  Genome-wide association study identifies the SERPINB gene cluster as a susceptibility locus for food allergy , 2017, Nature Communications.

[19]  Nilanjan Chatterjee,et al.  A subset-based approach improves power and interpretation for the combined analysis of genetic association studies of heterogeneous traits. , 2012, American journal of human genetics.

[20]  M. Nalls,et al.  A meta-analysis of genome-wide association studies identifies 17 new Parkinson's disease risk loci , 2017, Nature Genetics.

[21]  Nick C Fox,et al.  Analysis of shared heritability in common disorders of the brain , 2018, Science.

[22]  M. Owen,et al.  Expression quantitative trait loci in the developing human brain and their enrichment in neuropsychiatric disorders , 2018, Genome Biology.

[23]  E. Hollander Obsessive–compulsive disorder and spectrum across the life span , 2005, International journal of psychiatry in clinical practice.

[24]  Matteo Pellegrini,et al.  An Epigenetic Signature in Peripheral Blood Associated with the Haplotype on 17q21.31, a Risk Factor for Neurodegenerative Tauopathy , 2014, PLoS genetics.

[25]  Gabor T. Marth,et al.  A global reference for human genetic variation , 2015, Nature.

[26]  Eleazar Eskin,et al.  Interpreting Meta-Analyses of Genome-Wide Association Studies , 2012, PLoS genetics.

[27]  J. Scharf,et al.  Genetics of obsessive-compulsive disorder and related disorders. , 2014, The Psychiatric clinics of North America.

[28]  P. Visscher,et al.  Integration of summary data from GWAS and eQTL studies predicts complex trait gene targets , 2016, Nature Genetics.

[29]  Michael Boehnke,et al.  LocusZoom: regional visualization of genome-wide association scan results , 2010, Bioinform..

[30]  Erdogan Taskesen,et al.  Functional mapping and annotation of genetic associations with FUMA , 2017, Nature Communications.

[31]  O. Gruss,et al.  Centriolar satellites: busy orbits around the centrosome. , 2011, European journal of cell biology.

[32]  S. E. Stewart,et al.  Genome-Wide Association Study in Obsessive-Compulsive Disorder: Results from the OCGAS , 2014, Molecular Psychiatry.

[33]  J. Leckman,et al.  Neuroendocrine aspects of Tourette syndrome. , 2013, International review of neurobiology.

[34]  Magda Tsolaki,et al.  A NOVEL ALZHEIMER DISEASE LOCUS LOCATED NEAR THE GENE ENCODING TAU PROTEIN , 2015, Molecular Psychiatry.

[35]  Dan J Stein,et al.  Revealing the complex genetic architecture of obsessive–compulsive disorder using meta-analysis , 2018, Molecular Psychiatry.

[36]  C. Tsigos,et al.  Hypothalamic-pituitary-adrenal axis, neuroendocrine factors and stress. , 2002, Journal of psychosomatic research.

[37]  H. Hakonarson,et al.  ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data , 2010, Nucleic acids research.

[38]  Sina A. Gharib,et al.  Identifying gene targets for brain-related traits using transcriptomic and methylomic data from blood , 2018, Nature Communications.

[39]  G. Barker,et al.  Glutamate/glutamine and neuronal integrity in adults with ADHD: a proton MRS study , 2014, Translational Psychiatry.

[40]  Andrew J Lees,et al.  Microdeletion encompassing MAPT at chromosome 17q21.3 is associated with developmental delay and learning disability , 2006, Nature Genetics.

[41]  R. Anney,et al.  Autism genetics: opportunities and challenges for clinical translation , 2017, Nature Reviews Genetics.

[42]  P. Gaffney,et al.  Lupus nephritis susceptibility loci in women with systemic lupus erythematosus. , 2014, Journal of the American Society of Nephrology : JASN.

[43]  Dan J Stein,et al.  The epidemiology of obsessive-compulsive disorder in the National Comorbidity Survey Replication , 2010, Molecular Psychiatry.

[44]  Alicia R. Martin,et al.  Discovery of the first genome-wide significant risk loci for attention deficit/hyperactivity disorder , 2018, Nature Genetics.

[45]  G. Ferreira,et al.  Executive dysfunction, obsessive–compulsive symptoms, and attention deficit and hyperactivity disorder in Systemic Lupus Erythematosus: Evidence for basal ganglia dysfunction? , 2016, Journal of the Neurological Sciences.

[46]  K. Chakrabarty,et al.  Glutamatergic Dysfunction in OCD , 2005, Neuropsychopharmacology.

[47]  Michael A. Arbib,et al.  Dysfunctions of the basal ganglia-cerebellar-thalamo-cortical system produce motor tics in Tourette syndrome , 2017, PLoS Comput. Biol..

[48]  P. Lichtenstein,et al.  Genetic evidence for shared risks across psychiatric disorders and related traits in a Swedish population twin sample , 2017, bioRxiv.

[49]  M. Kaess,et al.  Hypothalamic-pituitary-adrenal axis, childhood adversity and adolescent nonsuicidal self-injury , 2016, Psychoneuroendocrinology.

[50]  D. Hinds,et al.  Identification of 15 genetic loci associated with risk of major depression in individuals of European descent , 2016, Nature Genetics.

[51]  Tyrone D. Cannon,et al.  Large-scale cognitive GWAS Meta-Analysis Reveals Tissue-Specific Neural Expression and Potential Nootropic Drug Targets , 2017, bioRxiv.

[52]  M. Bellani,et al.  Basal ganglia and restricted and repetitive behaviours in Autism Spectrum Disorders: current status and future perspectives , 2014, Epidemiology and Psychiatric Sciences.

[53]  A. Hartmann,et al.  Tourette syndrome and other neurodevelopmental disorders: a comprehensive review , 2017, Child and Adolescent Psychiatry and Mental Health.

[54]  Helen E. Parkinson,et al.  The new NHGRI-EBI Catalog of published genome-wide association studies (GWAS Catalog) , 2016, Nucleic Acids Res..

[55]  O. Andreassen,et al.  Genetic architecture of sporadic frontotemporal dementia and overlap with Alzheimer's and Parkinson's diseases , 2016, Journal of Neurology, Neurosurgery & Psychiatry.

[56]  G. Salmon,et al.  Attention deficit hyperactivity disorder. , 2018, British journal of hospital medicine.

[57]  Tsviya Olender,et al.  GeneCards Version 3: the human gene integrator , 2010, Database J. Biol. Databases Curation.

[58]  W. McMahon,et al.  Lifetime prevalence, age of risk, and genetic relationships of comorbid psychiatric disorders in Tourette syndrome. , 2015, JAMA psychiatry.

[59]  Stuart J. Ritchie,et al.  A combined analysis of genetically correlated traits identifies 187 loci and a role for neurogenesis and myelination in intelligence , 2018, Molecular Psychiatry.

[60]  M. Owen,et al.  Novel Insight into the Aetiology of Autism Spectrum Disorder Gained by Integrating Expression Data with Genome-wide Association Statistics , 2018, bioRxiv.

[61]  Nuno A. Fonseca,et al.  Expression Atlas: gene and protein expression across multiple studies and organisms , 2017, Nucleic Acids Res..

[62]  S. Claes,et al.  Differences in hypothalamic–pituitary–adrenal axis functioning among children with ADHD predominantly inattentive and combined types , 2009, European Child & Adolescent Psychiatry.

[63]  L. Vissers,et al.  Clinical and molecular delineation of the 17q21.31 microdeletion syndrome , 2008, Journal of Medical Genetics.

[64]  I. Adzhubei,et al.  Predicting Functional Effect of Human Missense Mutations Using PolyPhen‐2 , 2013, Current protocols in human genetics.

[65]  Dan-Yu Lin,et al.  Meta-analysis of genome-wide association studies with overlapping subjects. , 2009, American journal of human genetics.

[66]  M. Daly,et al.  An Atlas of Genetic Correlations across Human Diseases and Traits , 2015, Nature Genetics.

[67]  Christina M. Morris,et al.  Glutamatergic modulatory therapy for Tourette syndrome. , 2010, Medical hypotheses.

[68]  B. Horta,et al.  The worldwide prevalence of ADHD: a systematic review and metaregression analysis. , 2007, The American journal of psychiatry.

[69]  Latarsha J. Carithers,et al.  The Genotype-Tissue Expression (GTEx) Project. , 2015, Biopreservation and biobanking.

[70]  T. Wassink,et al.  A genome‐wide CNV analysis of schizophrenia reveals a potential role for a multiple‐hit model , 2014, American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics.

[71]  Davide Martino,et al.  An introduction to the clinical phenomenology of Tourette syndrome. , 2013, International review of neurobiology.

[72]  L. Honig,et al.  Model‐guided microarray implicates the retromer complex in Alzheimer's disease , 2005, Annals of neurology.

[73]  Ellis Patrick,et al.  An xQTL map integrates the genetic architecture of the human brain’s transcriptome and epigenome , 2017, Nature Neuroscience.

[74]  Carol L. Baym,et al.  Examining cortisol rhythmicity and responsivity to stress in children with Tourette syndrome , 2008, Psychoneuroendocrinology.

[75]  Nestor L. Lopez-Duran,et al.  Hypothalamic–pituitary–adrenal axis dysregulation in depressed children and adolescents: A meta-analysis , 2009, Psychoneuroendocrinology.

[76]  David Botstein,et al.  GO: : TermFinder--open source software for accessing Gene Ontology information and finding significantly enriched Gene Ontology terms associated with a list of genes , 2004, Bioinform..

[77]  M. Chakravarty,et al.  Mapping the development of the basal ganglia in children with attention-deficit/hyperactivity disorder. , 2014, Journal of the American Academy of Child and Adolescent Psychiatry.

[78]  Tao Wang,et al.  Enhancers active in dopamine neurons are a primary link between genetic variation and neuropsychiatric disease , 2018, Nature Neuroscience.

[79]  Miho Ohsugi,et al.  The Plk1 target Kizuna stabilizes mitotic centrosomes to ensure spindle bipolarity , 2006, Nature Cell Biology.

[80]  Christopher S. Poultney,et al.  Meta-analysis of GWAS of over 16,000 individuals with autism spectrum disorder highlights a novel locus at 10q24.32 and a significant overlap with schizophrenia , 2017, Molecular Autism.

[81]  John P. Rice,et al.  Identification of common genetic risk variants for autism spectrum disorder , 2019, Nature Genetics.

[82]  Guangchuang Yu,et al.  clusterProfiler: an R package for comparing biological themes among gene clusters. , 2012, Omics : a journal of integrative biology.

[83]  B. Leventhal,et al.  Investigation of previously implicated genetic variants in chronic tic disorders: a transmission disequilibrium test approach , 2017, European Archives of Psychiatry and Clinical Neuroscience.

[84]  S. E. Stewart,et al.  Genome-wide association study of Tourette Syndrome , 2012, Molecular Psychiatry.

[85]  S. Henikoff,et al.  Predicting the effects of coding non-synonymous variants on protein function using the SIFT algorithm , 2009, Nature Protocols.

[86]  D. Palumbo,et al.  Hypothesis III. Tourette syndrome is only one of several causes of a developmental basal ganglia syndrome. , 1997, Archives of neurology.

[87]  Joris M. Mooij,et al.  MAGMA: Generalized Gene-Set Analysis of GWAS Data , 2015, PLoS Comput. Biol..

[88]  Jan K. Buitelaar,et al.  Attention-deficit/hyperactivity disorder , 2015, Nature Reviews Disease Primers.

[89]  P. Paschou,et al.  Genetic susceptibility and neurotransmitters in Tourette syndrome. , 2013, International review of neurobiology.

[90]  P. Lavori,et al.  Assessing risk for the Tourette spectrum of disorders among first-degree relatives of probands with Tourette syndrome. , 1996, American journal of medical genetics.

[91]  J. Abela,et al.  Hypothalamic–Pituitary–Adrenal Axis Dysregulation in Dysphoric Children and Adolescents: Cortisol Reactivity to Psychosocial Stress from Preschool Through Middle Adolescence , 2010, Biological Psychiatry.

[92]  Julie Daniels,et al.  The epidemiology of autism spectrum disorders. , 2007, Annual review of public health.

[93]  Hunna J. Watson,et al.  Genome wide meta-analysis identifies genomic relationships, novel loci, and pleiotropic mechanisms across eight psychiatric disorders , 2019, bioRxiv.