Nucleotide sequence of the gene encoding the active-site serine β-lactamase from Streptomyces cacaoi

Abstract The gene encoding the extracellular active-site serine β-lactamase of Streptomyces cacaoi previously cloned into Streptomyces lividans , has the information for the synthesis of a 303 amino-acid precursor. The β-lactamase as excreted by the host S. lividans ML1, has a ragged amino-terminus, indicating either the presence of a leader peptidase of poor specificity or the action of an amino-peptidase. The deduced primary structure has been confirmed by amino acid sequencing of a 10-residue stretch at the amino terminus of the mature protein and an 8-residue stretch containing the active-site serine. The S. cacaoi β-lactamase is highly homologous with the class A β-lactamases of Streptomyces albus G and Staphylococcus aureus of known three-dimensional structure. Amino acid alignments show that the S. cacaoi β-lactamase essentially differs from these two latter enzymes by short insertions and deletions that do not affect the spatial disposition of the secondary structures.

[1]  A. Mclachlan Tests for comparing related amino-acid sequences. Cytochrome c and cytochrome c 551 . , 1971, Journal of molecular biology.

[2]  J. Garnier,et al.  Analysis of the accuracy and implications of simple methods for predicting the secondary structure of globular proteins. , 1978, Journal of molecular biology.

[3]  F. Sanger,et al.  Cloning in single-stranded bacteriophage as an aid to rapid DNA sequencing. , 1980, Journal of molecular biology.

[4]  R. Ambler,et al.  The structure of beta-lactamases. , 1980, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

[5]  H. Ogawara,et al.  beta-lactamase from Streptomyces cacaoi. Purification and properties. , 1981, The Journal of biological chemistry.

[6]  R. Sprengel,et al.  Penicillinase from Bacillus licheniformis: nucleotide sequence of the gene and implications for the biosynthesis of a secretory protein in a Gram-positive bacterium. , 1981, Nucleic acids research.

[7]  A. D. McLachlan,et al.  Codon preference and its use in identifying protein coding regions in long DNA sequences , 1982, Nucleic Acids Res..

[8]  M. I. Kanehisa,et al.  Pattern recognition in nucleic acid sequences. I. A general method for finding local homologies and symmetries , 1982, Nucleic Acids Res..

[9]  M. I. Kanehisa,et al.  Los Alamos sequence analysis package for nucleic acids and proteins , 1982, Nucleic Acids Res..

[10]  C. Thompson,et al.  Nucleotide sequence of a streptomycete aminoglycoside phosphotransferase gene and its relationship to phosphotransferases encoded by resistance plasmids. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[11]  J. Sambrook,et al.  Molecular Cloning: A Laboratory Manual , 2001 .

[12]  Rodger Staden,et al.  Measurements of the effects that coding for a protein has on a DNA sequence and their use for finding genes , 1984, Nucleic Acids Res..

[13]  J. Frère,et al.  The β-Lactamase of Streptomyces Cacaoi: Interaction with Cefoxitin and β-Iodopenicillanate , 1985 .

[14]  D. Hopwood Genetic manipulation of Streptomyces : a laboratory manual , 1985 .

[15]  J. Frère,et al.  6-beta-Iodopenicillanate as a probe for the classification of beta-lactamases. , 1986, The Biochemical journal.

[16]  C. Higgins,et al.  Regulation of gene expression : 25 years on , 1986 .

[17]  J. Frère,et al.  The active sites of the beta-lactamases of Streptomyces cacaoi and Streptomyces albus G. , 1987, The Biochemical journal.

[18]  J Moult,et al.  Bacterial resistance to beta-lactam antibiotics: crystal structure of beta-lactamase from Staphylococcus aureus PC1 at 2.5 A resolution. , 1987, Science.

[19]  J. Frère,et al.  Nucleotide sequence of the gene encoding the Streptomyces albus G β‐lactamase precursor , 1987 .

[20]  J M Ghuysen,et al.  The crystal structure of the beta-lactamase of Streptomyces albus G at 0.3 nm resolution. , 1987, The Biochemical journal.

[21]  J. Frère,et al.  Primary structure of the Streptomyces R61 extracellular DD-peptidase. 2. Amino acid sequence data. , 1987, European journal of biochemistry.

[22]  R. Novick,et al.  Nucleotide sequence and expression of the beta-lactamase gene from Staphylococcus aureus plasmid pI258 in Escherichia coli, Bacillus subtilis, and Staphylococcus aureus , 1987, Journal of bacteriology.