A novel stacked generalization of models for improved TB detection in chest radiographs

Chest x-ray (CXR) analysis is a common part of the protocol for confirming active pulmonary Tuberculosis (TB). However, many TB endemic regions are severely resource constrained in radiological services impairing timely detection and treatment. Computer-aided diagnosis (CADx) tools can supplement decision-making while simultaneously addressing the gap in expert radiological interpretation during mobile field screening. These tools use hand-engineered and/or convolutional neural networks (CNN) computed image features. CNN, a class of deep learning (DL) models, has gained research prominence in visual recognition. It has been shown that Ensemble learning has an inherent advantage of constructing non-linear decision making functions and improve visual recognition. We create a stacking of classifiers with hand-engineered and CNN features toward improving TB detection in CXRs. The results obtained are highly promising and superior to the state-of-the-art.

[1]  Andrew Zisserman,et al.  Very Deep Convolutional Networks for Large-Scale Image Recognition , 2014, ICLR.

[2]  Jian Sun,et al.  Deep Residual Learning for Image Recognition , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[3]  W. Huda,et al.  Effective doses in radiology and diagnostic nuclear medicine: a catalog. , 2008, Radiology.

[4]  C. Rout,et al.  Role of Gist and PHOG Features in Computer-Aided Diagnosis of Tuberculosis without Segmentation , 2014, PloS one.

[5]  Jonas Mockus,et al.  On Bayesian Methods for Seeking the Extremum , 1974, Optimization Techniques.

[6]  Forrest N. Iandola,et al.  Shallow Networks for High-accuracy Road Object-detection , 2016, VEHITS.

[7]  Jürgen Schmidhuber,et al.  Deep learning in neural networks: An overview , 2014, Neural Networks.

[8]  Sergey Ioffe,et al.  Rethinking the Inception Architecture for Computer Vision , 2015, 2016 IEEE Conference on Computer Vision and Pattern Recognition (CVPR).

[9]  Hyo-Eun Kim,et al.  A novel approach for tuberculosis screening based on deep convolutional neural networks , 2016, SPIE Medical Imaging.

[10]  Justin O'Grady,et al.  Chest radiography for tuberculosis screening is back on the agenda. , 2012, The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease.

[11]  Clement J. McDonald,et al.  Lung Segmentation in Chest Radiographs Using Anatomical Atlases With Nonrigid Registration , 2014, IEEE Transactions on Medical Imaging.

[12]  Stefan Carlsson,et al.  CNN Features Off-the-Shelf: An Astounding Baseline for Recognition , 2014, 2014 IEEE Conference on Computer Vision and Pattern Recognition Workshops.

[13]  P. Lakhani,et al.  Deep Learning at Chest Radiography: Automated Classification of Pulmonary Tuberculosis by Using Convolutional Neural Networks. , 2017, Radiology.

[14]  Geoffrey E. Hinton,et al.  ImageNet classification with deep convolutional neural networks , 2012, Commun. ACM.

[15]  Stefan Jaeger,et al.  Two public chest X-ray datasets for computer-aided screening of pulmonary diseases. , 2014, Quantitative imaging in medicine and surgery.

[16]  David H. Wolpert,et al.  Stacked generalization , 1992, Neural Networks.

[17]  B. van Ginneken,et al.  An automated tuberculosis screening strategy combining X-ray-based computer-aided detection and clinical information , 2016, Scientific Reports.

[18]  B van Ginneken,et al.  Detection of tuberculosis using digital chest radiography: automated reading vs. interpretation by clinical officers. , 2013, The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease.

[19]  R. Sivaramakrishnan,et al.  Visualizing abnormalities in chest radiographs through salient network activations in Deep Learning , 2017, 2017 IEEE Life Sciences Conference (LSC).

[20]  Oleksandr Makeyev,et al.  Neural network with ensembles , 2010, The 2010 International Joint Conference on Neural Networks (IJCNN).

[21]  João Francisco Valiati,et al.  Pre-trained convolutional neural networks as feature extractors for tuberculosis detection , 2017, Comput. Biol. Medicine.