DNA Structure and Function
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[1] Alexander Rich,et al. FORMATION OF A THREE-STRANDED POLYNUCLEOTIDE MOLECULE , 1957 .
[2] Robert Langridge,et al. The molecular configuration of deoxyribonucleic acid: II. Molecular models and their fourier transforms , 1960 .
[3] H. R. Wilson,et al. The molecular configuration of deoxyribonucleic acid , 1960 .
[4] K. Hoogsteen,et al. The crystal and molecular structure of a hydrogen-bonded complex between 1-methylthymine and 9-methyladenine , 1963 .
[5] H. R. Wilson,et al. THE MOLECULAR CONFIGURATION OF DEOXYRIBONUCLEIC ACID. IV. X-RAY DIFFRACTION STUDY OF THE A FORM. , 1965, Journal of molecular biology.
[6] P T Gilham,et al. Studies on some interactions and reactions of oligonucleotides in aqueous solution. , 1966, Biochemistry.
[7] M. Inouye,et al. Frameshift mutations and the genetic code. This paper is dedicated to Professor Theodosius Dobzhansky on the occasion of his 66th birthday. , 1966, Cold Spring Harbor symposia on quantitative biology.
[8] A. Gierer. Model for DNA and Protein Interactions and the Function of the Operator , 1966, Nature.
[9] G. Felsenfeld,et al. The physical and chemical properties of nucleic acids. , 1967, Annual review of biochemistry.
[10] B. Erlanger,et al. NUCLEAR FLUORESCENCE EMPLOYING ANTINUCLEOSIDE IMMUNOGLOBULINS , 1967, The Journal of experimental medicine.
[11] R. Wells,et al. Specificity of the three-stranded complex formation between double-stranded DNA and single-stranded RNA containing repeating nucleotide sequences. , 1968, Journal of molecular biology.
[12] J. Sturtevant,et al. Heats of the helix–coil transitions of the poly A–poly U complexes , 1968, Biopolymers.
[13] R. Glaser,et al. Topography of nucleic acid helices in solutions. III. Interactions of spermine and spermidine derivatives with polyadenylic–polyuridylic and polyinosinic–polycytidylic acid helices , 1968, Biopolymers.
[14] G. Cassani,et al. Oligodeoxythymidylate: polydeoxyadenylate and oligodeoxyadenylate: polydeoxythymidylate interactions. , 1969, Biochemistry.
[15] R. Langridge,et al. Physical and Enzymatic Studies on Poly d(I–C).Poly d(I–C), an Unusual Double-helical DNA , 1970, Nature.
[16] F. Frank-Kamenetskii,et al. Simplification of the empirical relationship between melting temperature of DNA, its GC content and concentration of sodium ions in solution. , 1971, Biopolymers.
[17] T M Jovin,et al. Salt-induced co-operative conformational change of a synthetic DNA: equilibrium and kinetic studies with poly (dG-dC). , 1972, Journal of molecular biology.
[18] R. Lerner,et al. An immunological study of the fates of nuclear and nucleolar macromoleculus during the cell cycle. , 1972, Journal of molecular biology.
[19] S. Arnott,et al. Structures for the polynucleotide complexes poly(dA) with poly (dT) and poly(dT) with poly(dA) with poly (dT). , 1974, Journal of molecular biology.
[20] J. Dodgson,et al. Transmission of stability (telestability) in deoxyribonucleic acid. Physical and enzymatic studies on the duplex block polymer d(C15A15) - d(T15G15). , 1975, The Journal of biological chemistry.
[21] H. Vosberg,et al. Action of nicking-closing enzyme on supercoiled and nonsupercoiled closed circular DNA: formation of a Boltzmann distribution of topological isomers. , 1975, Proceedings of the National Academy of Sciences of the United States of America.
[22] J. Wang,et al. Conformational fluctuations of DNA helix. , 1975, Proceedings of the National Academy of Sciences of the United States of America.
[23] N C Seeman,et al. RNA double-helical fragments at atomic resolution. I. The crystal and molecular structure of sodium adenylyl-3',5'-uridine hexahydrate. , 1976, Journal of molecular biology.
[24] N C Seeman,et al. RNA double-helical fragments at atomic resolution. II. The crystal structure of sodium guanylyl-3',5'-cytidine nonahydrate. , 1976, Journal of molecular biology.
[25] J. M. Collins. Deoxyribonucleic acid structure in human diploid fibroblasts stimulated to proliferate. , 1977, The Journal of biological chemistry.
[26] D. Johnson,et al. Unique structures formed by pyrimidine-purine DNAs which may be four-stranded. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[27] H. Birnboim. Spacing of polypyrimidine regions in mouse DNA as determined by poly(adenylate, guanylate) binding. , 1978, Journal of molecular biology.
[28] J. Wang,et al. Nonhistone proteins HMG1 and HMG2 change the DNA helical structure. , 1978, Science.
[29] L. Liu,et al. Nonhistone proteins HMG1 and HMG2 unwind DNA double helix. , 1979, Nucleic acids research.
[30] G. Reeck,et al. Preferential affinity of high molecular weight high mobility group non-histone chromatin proteins for single-stranded DNA. , 1979, The Journal of biological chemistry.
[31] C. J. Alden,et al. Bent DNA: visualization of a base-paired and stacked A-B conformational junction. , 1979, The Journal of biological chemistry.
[32] Jacques H. van Boom,et al. Molecular structure of a left-handed double helical DNA fragment at atomic resolution , 1979, Nature.
[33] D. Lilley,et al. The inverted repeat as a recognizable structural feature in supercoiled DNA molecules. , 1980, Proceedings of the National Academy of Sciences of the United States of America.
[34] M. Yaniv,et al. Absence of nucleosomes in a fraction of SV40 chromatin between the origin of replication and the region coding for the late leader RNA , 1980, Cell.
[35] E. Trifonov,et al. The pitch of chromatin DNA is reflected in its nucleotide sequence. , 1980, Proceedings of the National Academy of Sciences of the United States of America.
[36] HMG proteins (1 + 2) form beaded structures when complexed with closed circular DNA. , 1980, Nucleic acids research.
[37] Y. Aloni,et al. A nucleosome-free region in SV40 minichromosomes , 1980, Nature.
[38] E. Sage,et al. Conformational changes of poly(dG-dC) . poly(dG-dC) modified by the carcinogen N-acetoxy-N-acetyl-2-aminofluorene. , 1981, Nucleic acids research.
[39] D. Lilley. In vivo consequences of plasmid topology , 1981, Nature.
[40] L. J. Peck,et al. Sequence dependence of the helical repeat of DNA in solution , 1981, Nature.
[41] S. Stirdivant,et al. Left-handed DNA in restriction fragments and a recombinant plasmid , 1981, Nature.
[42] Nikos Panayotatos,et al. Cruciform structures in supercoiled DNA , 1981, Nature.
[43] Alfred Nordheim,et al. Antibodies to left-handed Z-DNA bind to interband regions of Drosophila polytene chromosomes , 1981, Nature.
[44] A. Klug,et al. Sequence-dependent helical periodicity of DNA , 1981, Nature.
[45] S. Artavanis-Tsakonas,et al. DNA sequences flanking the starts of the hsp 70 and αβ heat shock genes are homologous , 1981 .
[46] A. Rich,et al. Antibodies specific for left-handed Z-DNA. , 1981, Proceedings of the National Academy of Sciences of the United States of America.
[47] H R Drew,et al. Structure of a B-DNA dodecamer. II. Influence of base sequence on helix structure. , 1981, Journal of molecular biology.
[48] J. Jackson,et al. Circular dichroism, thermal denaturation, and deoxyribonuclease I digestion studies of nucleosomes highly enriched in high mobility group proteins HMG 1 and HMG 2. , 1981, Biochemistry.
[49] C. Hélène,et al. Interactions between functional groups in protein-nucleic acid associations. , 1982, Progress in biophysics and molecular biology.
[50] S. Stirdivant,et al. Energetic and structural inter-relationship between DNA supercoiling and the right- to left-handed Z helix transitions in recombinant plasmids. , 1982, The Journal of biological chemistry.
[51] M. Gellert,et al. Cruciform structures in palindromic DNA are favored by DNA supercoiling. , 1982, Journal of molecular biology.
[52] D M Crothers,et al. Bent helical structure in kinetoplast DNA. , 1982, Proceedings of the National Academy of Sciences of the United States of America.
[53] A. Rich,et al. Monoclonal antibodies recognize different parts of Z-DNA. , 1982, The Journal of biological chemistry.
[54] Robert D. Wells,et al. Left-handed Z-DNA is induced by supercoiling in physiological ionic conditions , 1982, Nature.
[55] S. Stirdivant,et al. Left-handed DNA. Cloning, characterization, and instability of inserts containing different lengths of (dC-dG) in Escherichia coli. , 1982, The Journal of biological chemistry.
[56] C. Hentschel. Homocopolymer sequences in the spacer of a sea urchin histone gene repeat are sensitive to S1 nuclease , 1982, Nature.
[57] M. DePamphilis,et al. Initiation of SV40 DNA replication in vivo: Location and structure of 5′ ends of DNA synthesized in the ori region , 1982, Cell.
[58] L. J. Peck,et al. Flipping of cloned d(pCpG)n.d(pCpG)n DNA sequences from right- to left-handed helical structure by salt, Co(III), or negative supercoiling. , 1982, Proceedings of the National Academy of Sciences of the United States of America.
[59] P. Sautière,et al. Identification of a single-stranded DNA binding protein from rat liver with high mobility group protein 1. , 1982, The Journal of biological chemistry.
[60] Alfred Nordheim,et al. Negatively supercoiled plasmids contain left-handed Z-DNA segments as detected by specific antibody binding , 1982, Cell.
[61] Effects of Neighboring DNA homopolymers on the biochemical and physical properties of the Escherichia coli lactose promoter. II. In vitro transcription analyses. , 1982, The Journal of biological chemistry.
[62] Novel aspects of the structure of the Escherichia coli nucleoid investigated by a rapid sedimentation assay. , 1982, Canadian journal of biochemistry.
[63] W. Fitch,et al. Evolutionary selection for perfect hairpin structures in viral DNAs , 1982, Nature.
[64] M. Behe,et al. Effect of the B--Z transition in poly(dG-m5dC) . poly(dG-m5dC) on nucleosome formation. , 1982, Proceedings of the National Academy of Sciences of the United States of America.
[65] D. Pulleyblank,et al. Facile transition of poly[d(TG)·d(CA)] into a left-handed helix in physiological conditions , 1983, Nature.
[66] J. Palau,et al. DNA and histone H1 interact with different domains of HMG 1 and 2 proteins. , 1983, The EMBO journal.
[67] C. Newlon,et al. Stably denatured regions in chromosomal DNA from the cdc2 Saccharomyces cerevisiae cell cycle mutant , 1983, Molecular and cellular biology.
[68] A. Rich,et al. The sequence (dC-dA)n X (dG-dT)n forms left-handed Z-DNA in negatively supercoiled plasmids. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[69] H. Manor,et al. "Onion skin" replication of integrated polyoma virus DNA and flanking sequences in polyoma-transformed rat cells: termination within a specific cellular DNA segment. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[70] H. Weintraub. A dominant role for DNA secondary structure in forming hypersensitive structures in chromatin , 1983, Cell.
[71] H. Pelham,et al. Association of an S1 nuclease-sensitive structure with short direct repeats 5′ of Drosophila heat shock genes , 1983, Nature.
[72] D. Pulleyblank,et al. The in-vivo occurrence of Z DNA. , 1983, Journal of biomolecular structure & dynamics.
[73] R. Wells,et al. Conformational flexibility of junctions between contiguous B- and Z-DNAs in supercoiled plasmids. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[74] J. Nickol,et al. DNA stem-loop structures bind poorly to histone octamer cores. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[75] M. Gellert,et al. Slow cruciform transitions in palindromic DNA. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[76] L. J. Peck,et al. Supercoiling and left-handed Z-DNA. , 1983, Cold Spring Harbor symposia on quantitative biology.
[77] L. J. Peck,et al. Energetics of B-to-Z transition in DNA. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[78] A. Lamond,et al. Requirement for an upstream element for optimal transcription of a bacterial tRNA gene , 1983, Nature.
[79] C. Singleton. Effects of salts, temperature, and stem length on supercoil-induced formation of cruciforms. , 1983, The Journal of biological chemistry.
[80] E. Schon,et al. Conformation of promoter DNA: Fine mapping of S1-hypersensitive sites , 1983, Cell.
[81] A. Rich,et al. Negatively supercoiled simian virus 40 DNA contains Z-DNA segments within transcriptional enhancer sequences , 1983, Nature.
[82] B. Stollar,et al. Dependence of Z-DNA antibody binding to polytene chromosomes on acid fixation and DNA torsional strain , 1983, Nature.
[83] D. Lockshon,et al. Positively supercoiled plasmid DNA is produced by treatment of Escherichia coli with DNA gyrase inhibitors. , 1983, Nucleic acids research.
[84] R. Dickerson,et al. Base sequence and helix structure variation in B and A DNA. , 1983, Journal of molecular biology.
[85] J. Sutherland,et al. Vacuum ultraviolet circular dichroism of poly(dI-dC)·poly(dI-dC): No evidence for a left-handed double helix , 1983 .
[86] R. Sinden,et al. Perfect palindromic lac operator DNA sequence exists as a stable cruciform structure in supercoiled DNA in vitro but not in vivo. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[87] M. Gellert,et al. Regulation of the genes for E. coli DNA gyrase: Homeostatic control of DNA supercoiling , 1983, Cell.
[88] Alfred Nordheim,et al. THE CHEMISTRY AND BIOLOGY OF LEFT-HANDED Z-DNA , 1984 .
[89] M. DePamphilis,et al. Sequence specificity for the initiation of RNA-primed simian virus 40 DNA synthesis in vivo. , 1984, Journal of molecular biology.
[90] K. Drlica,et al. Biology of bacterial deoxyribonucleic acid topoisomerases. , 1984, Microbiological reviews.
[91] A. Rich,et al. Restriction endonucleases can be used to study B-Z junctions in supercoiled DNA. , 1984, Proceedings of the National Academy of Sciences of the United States of America.
[92] D. Kowalski,et al. Mung bean nuclease cleavage of a dA + dT-rich sequence or an inverted repeat sequence in supercoiled PM2 DNA depends on ionic environment. , 1984, Nucleic acids research.
[93] J. S. Lee,et al. Poly(pyrimidine) . poly(purine) synthetic DNAs containing 5-methylcytosine form stable triplexes at neutral pH. , 1984, Nucleic acids research.
[94] D. Lilley,et al. Cruciform-resolvase interactions in supercoiled DNA , 1984, Cell.
[95] G. Ciliberto,et al. Inhibition of eukaryotic tRNA transcription by potential Z‐DNA sequences. , 1984, The EMBO journal.
[96] Hen-Ming Wu,et al. The locus of sequence-directed and protein-induced DNA bending , 1984, Nature.
[97] L. Marekov,et al. Involvement of protein HMG1 in DNA replication , 1984, FEBS letters.
[98] M. Yoshida,et al. Unwinding of DNA by nonhistone chromosomal protein HMG(1 + 2) from pig thymus as determined with endonuclease. , 1984, Journal of biochemistry.
[99] R. Sinden,et al. Cruciform transitions in DNA. , 1984, The Journal of biological chemistry.
[100] In Z-DNA the sequence G-C-G-C is neither methylated by Hha I methyltransferase nor cleaved by Hha I restriction endonuclease. , 1984, Proceedings of the National Academy of Sciences of the United States of America.
[101] A. Martinez-Arias,et al. Role of an upstream regulatory element in leucine repression of the Saccharomyces cerevisiae leu2 gene , 1984, Nature.
[102] B. Crombrugghe,et al. A sequence conserved in both the chicken and mouse alpha 2(I) collagen promoter contains sites sensitive to S1 nuclease. , 1984, The Journal of biological chemistry.
[103] F. Harper,et al. Rat liver HMG1: a physiological nucleosome assembly factor. , 1984, The EMBO journal.
[104] R. Wells,et al. HhaI methylase and restriction endonuclease as probes for B to Z DNA conformational changes in d(GCGC) sequences. , 1984, Nucleic acids research.
[105] F. Studier,et al. Enzymes and sites of genetic recombination: studies with gene-3 endonuclease of phage T7 and with site-affinity mutants of phage lambda. , 1984, Cold Spring Harbor symposia on quantitative biology.
[106] M. Bustin,et al. The intracellular distribution and function of the high mobility group chromosomal proteins. , 1985, Experimental cell research.
[107] Schaffer,et al. Cloning, sequencing, and functional analysis of oriL, a herpes simplex virus type 1 origin of DNA synthesis , 1985, Molecular and cellular biology.
[108] D. S. Gross,et al. Chromatin structure of the potential Z-forming sequence (dT-dG)n X (dC-dA)n. Evidence for an "alternating-B" conformation. , 1985, Journal of molecular biology.
[109] A. Rich,et al. Anti‐Z‐DNA antibody binding can stabilize Z‐DNA in relaxed and linear plasmids under physiological conditions. , 1985, The EMBO journal.
[110] Inhibition of the herpes simplex virus thymidine kinase gene transfection in Ltk- cells by potential Z-DNA forming polymers. , 1985, Nucleic acids research.
[111] K. Angelides,et al. Left-handed DNA and the synaptic pairing reaction promoted by ustilago recl protein , 1985, Cell.
[112] S. Mirkin,et al. A pH-dependent structural transition in the homopurine-homopyrimidine tract in superhelical DNA. , 1985, Journal of biomolecular structure & dynamics.
[113] J. Gralla,et al. Supercoiling response of the lac ps promoter in vitro. , 1985, Journal of molecular biology.
[114] W. McClure,et al. Mechanism and control of transcription initiation in prokaryotes. , 1985, Annual review of biochemistry.
[115] R. J. Kelleher,et al. Sequence-dependent energetics of the B-Z transition in supercoiled DNA containing nonalternating purine-pyrimidine sequences. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[116] D. Lilley. The kinetic properties of cruciform extrusion are determined by DNA base-sequence. , 1985, Nucleic acids research.
[117] V. Vagner,et al. Activation and inhibition of transcription by supercoiling. , 1985, Journal of molecular biology.
[118] D. Jackson,et al. A general method for preparing chromatin containing intact DNA. , 1985, The EMBO journal.
[119] N. Cozzarelli,et al. The stereostructure of knots and catenanes produced by phage λ integrative recombination: implications for mechanism and DNA structure , 1985, Cell.
[120] S. West,et al. Cleavage of cruciform DNA structures by an activity from Saccharomyces cerevisiae. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[121] J E Hearst,et al. Psoralens as photoactive probes of nucleic acid structure and function: organic chemistry, photochemistry, and biochemistry. , 1985, Annual review of biochemistry.
[122] D. Kowalski,et al. Altered DNA conformations detected by mung bean nuclease occur in promoter and terminator regions of supercoiled pBR322 DNA. , 1985, Nucleic acids research.
[123] L. Symington,et al. Partial purification of an enzyme from Saccharomyces cerevisiae that cleaves Holliday junctions. , 1985, Proceedings of the National Academy of Sciences of the United States of America.
[124] A. Rich,et al. Chemical probes of DNA conformation: detection of Z-DNA at nucleotide resolution , 1985, Cell.
[125] P. Hagerman,et al. Sequence dependence of the curvature of DNA: a test of the phasing hypothesis. , 1985, Biochemistry.
[126] M. Bustin,et al. Hierarchy of binding sites for chromosomal proteins HMG 1 and 2 in supercoiled deoxyribonucleic acid. , 1985, Biochemistry.
[127] A. Rich,et al. Isolation of Z-DNA binding proteins from SV40 minichromosomes: evidence for binding to the viral control region , 1985, Cell.
[128] A. Rich,et al. Isolation and characterization of Z-DNA binding proteins from wheat germ. , 1985, Biochemistry.
[129] J. Van De Sande,et al. Assembly and characterization of nucleosomal cores on B- vs. Z-form DNA. , 1985, Biochemistry.
[130] D. Lilley,et al. DNA bending induced by cruciform formation , 1985, Nature.
[131] H R Drew,et al. DNA bending and its relation to nucleosome positioning. , 1985, Journal of molecular biology.
[132] N. Seeman,et al. NMR analysis of DNA junctions: imino proton NMR studies of individual arms and intact junction. , 1985, Biochemistry.
[133] D. Pulleyblank,et al. Transition of a cloned d(AT)n-d(AT)n tract to a cruciform in vivo. , 1985, Nucleic acids research.
[134] D. Lilley,et al. A dominant influence of flanking sequences on a local structural transition in DNA , 1986, Cell.
[135] D Grunberger,et al. Enhanced expression of the bacterial chloramphenicol acetyltransferase gene in mouse cells cotransfected with synthetic polynucleotides able to form Z-DNA. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[136] Marc Nadal,et al. Positively supercoiled DNA in a virus-like particle of an archaebacterium , 1986, Nature.
[137] M. Leng,et al. N-hydroxyaminofluorene: a chemical probe for DNA conformation. , 1986, Journal of molecular biology.
[138] K. Drlica,et al. Topoisomerase I mutants: the gene on pBR322 that encodes resistance to tetracycline affects plasmid DNA supercoiling. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[139] G. Lee-Chen,et al. Simian virus 40 DNA replication: functional organization of regulatory elements , 1986, Molecular and cellular biology.
[140] D. Tremethick,et al. High mobility group proteins 1 and 2 stimulate transcription in vitro by RNA polymerases II and III. , 1986, The Journal of biological chemistry.
[141] J. Yu,et al. ADR1-mediated regulation of ADH2 requires an inverted repeat sequence , 1986, Molecular and cellular biology.
[142] D. Lockshon,et al. Cloning and characterization of oriL2, a large palindromic DNA replication origin of herpes simplex virus type 2 , 1986, Journal of virology.
[143] H. Bujard,et al. Promoters of Escherichia coli: a hierarchy of in vivo strength indicates alternate structures. , 1986, The EMBO journal.
[144] L. Iacono-Connors,et al. Altered DNA conformations in the gene regulatory region of torsionally-stressed SV40 DNA. , 1986, Nucleic acids research.
[145] S. Mirkin,et al. Structures of homopurine-homopyrimidine tract in superhelical DNA. , 1986, Journal of biomolecular structure & dynamics.
[146] S. Molineaux,et al. Recombination within the myelin basic protein gene created the dysmyelinating shiverer mouse mutation. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[147] A. Nordheim,et al. Diethyl pyrocarbonate: a chemical probe for DNA cruciforms. , 1986, Nucleic acids research.
[148] U. Singh,et al. On loop folding in nucleic acid hairpin-type structures. , 1986, Journal of biomolecular structure & dynamics.
[149] N. Cozzarelli,et al. Biochemical topology: applications to DNA recombination and replication. , 1986, Science.
[150] J. Nickol,et al. Nucleosome phasing on a DNA fragment from the replication origin of simian virus 40 and rephasing upon cruciform formation of the DNA , 1986, Molecular and cellular biology.
[151] M. Delpech,et al. Nuclear accumulation of HMG1 protein is correlated to DNA synthesis , 1986, Biology of the cell.
[152] E N Trifonov,et al. Curved DNA: design, synthesis, and circularization. , 1986, Proceedings of the National Academy of Sciences of the United States of America.
[153] H. Weintraub,et al. Expression of transfected DNA depends on DNA topology , 1986, Cell.
[154] Paul J. Hagerman,et al. Sequence-directed curvature of DNA , 1986, Nature.
[155] D. Lilley,et al. Highly selective chemical modification of cruciform loops by diethyl pyrocarbonate. , 1986, Nucleic acids research.
[156] H. Drew,et al. Sequence periodicities in chicken nucleosome core DNA. , 1986, Journal of molecular biology.
[157] Hen-Ming Wu,et al. DNA bending at adenine · thymine tracts , 1986, Nature.
[158] H. Lodish. Molecular Cell Biology , 1986 .
[159] A nuclease-hypersensitive region forms de novo after chromosome replication. , 1987, Molecular and cellular biology.
[160] R. Umek,et al. Yeast regulatory sequences preferentially adopt a non-B conformation in supercoiled DNA. , 1987, Nucleic acids research.
[161] S. Diekmann,et al. Temperature and salt dependence of the gel migration anomaly of curved DNA fragments , 1987, Nucleic Acids Res..
[162] D. Lilley,et al. The mechanism of cruciform formation in supercoiled DNA: initial opening of central basepairs in salt-dependent extrusion. , 1987, Nucleic acids research.
[163] J. Wang,et al. Supercoiling of the DNA template during transcription. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[164] S. Chandrasekharappa,et al. Effects of position and orientation of the 72-base-pair-repeat transcriptional enhancer on replication from the simian virus 40 core origin , 1987, Journal of virology.
[165] J. Barton,et al. Evidence for altered DNA conformations in the simian virus 40 genome: site-specific DNA cleavage by the chiral complex lambda-tris(4,7-diphenyl-1,10-phenanthroline)cobalt(III). , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[166] N. Seeman,et al. The melting behavior of a DNA junction structure: A calorimetric and spectroscopic study , 1987, Biopolymers.
[167] N. Panayotatos,et al. A native cruciform DNA structure probed in bacteria by recombinant T7 endonuclease. , 1987, The Journal of biological chemistry.
[168] R. Wartell,et al. Sequence distributions associated with DNA curvature are found upstream of strong E. coli promoters. , 1987, Nucleic acids research.
[169] P. Dervan,et al. Sequence-specific cleavage of double helical DNA by triple helix formation. , 1987, Science.
[170] T. Tullius,et al. The unusual conformation adopted by the adenine tracts in kinetoplast DNA , 1987, Cell.
[171] D. Praseuth,et al. Sequence-specific recognition, photocrosslinking and cleavage of the DNA double helix by an oligo-[alpha]-thymidylate covalently linked to an azidoproflavine derivative. , 1987, Nucleic acids research.
[172] R. Sinden,et al. Reduced 4,5',8-trimethylpsoralen cross-linking of left-handed Z-DNA stabilized by DNA supercoiling. , 1987, Biochemistry.
[173] M. Greenberg,et al. Mutation of the c-fos gene dyad symmetry element inhibits serum inducibility of transcription in vivo and the nuclear regulatory factor binding in vitro , 1987, Molecular and cellular biology.
[174] C. Passananti,et al. Structure of an inverted duplication formed as a first step in a gene amplification event: implications for a model of gene amplification. , 1987, The EMBO journal.
[175] Fritz Eckstein,et al. Nucleic acids and molecular biology , 1987 .
[176] W. Bauer,et al. Superhelical DNA with local substructures. A generalization of the topological constraint in terms of the intersection number and the ladder-like correspondence surface. , 1987, Journal of molecular biology.
[177] R. Wells,et al. Left-handed Z-DNA binding by the recA protein of Escherichia coli. , 1987, The Journal of biological chemistry.
[178] R. Kolodner,et al. Construction of a synthetic Holliday junction analog and characterization of its interaction with a Saccharomyces cerevisiae endonuclease that cleaves Holliday junctions. , 1987, The Journal of biological chemistry.
[179] D. Lilley,et al. The anomalous gel migration of a stable cruciform: temperature and salt dependence, and some comparisons with curved DNA. , 1987, Nucleic acids research.
[180] A. Rich,et al. A bifurcated hydrogen-bonded conformation in the d(A.T) base pairs of the DNA dodecamer d(CGCAAATTTGCG) and its complex with distamycin. , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[181] K. V. van Holde,et al. A reexamination of the reported B----Z DNA transition in nucleosomes reconstituted with poly(dG-m5dC).poly(dG-m5dC). , 1987, Biochemistry.
[182] A. Klug,et al. The structure of an oligo(dA)·oligo(dT) tract and its biological implications , 1987, Nature.
[183] G. Felsenfeld,et al. Effect of Z-DNA on nucleosome placement. , 1987, Journal of molecular biology.
[184] J. S. Lee,et al. A monoclonal antibody to triplex DNA binds to eucaryotic chromosomes. , 1987, Nucleic acids research.
[185] L. A. Kohlstaedt,et al. Non-histone chromosomal protein HMG1 modulates the histone H1-induced condensation of DNA. , 1987, The Journal of biological chemistry.
[186] D. Lilley,et al. Influence of cation size and charge on the extrusion of a salt-dependent cruciform. , 1987, Journal of molecular biology.
[187] S. West,et al. Purification and properties of a nuclease from Saccharomyces cerevisiae that cleaves DNA at cruciform junctions. , 1987, The Journal of biological chemistry.
[188] M. Bischoff,et al. Z-DNA-binding proteins from bull testis. , 1987, Nucleic acids research.
[189] M. Yoshida. High glutamic and aspartic region in nonhistone protein HMG(1+2) unwinds DNA double helical structure. , 1987, Journal of biochemistry.
[190] Binding of anti-Z-DNA antibodies to negatively supercoiled SV40 DNA. , 1987, Nucleic acids research.
[191] J. R. Fresco,et al. Formation of the triple-stranded polynucleotide helix, poly(A.A.U). , 1987, Proceedings of the National Academy of Sciences of the United States of America.
[192] Franca Esposito,et al. Supercoiling in prokaryotic and eukaryotic DNA: changes in response to topological perturbation of plasmids in E. coli and SV40 in vitro, in nuclei and in CV-1 cells , 1987, Nucleic Acids Res..
[193] A. Klug,et al. The bending of DNA in nucleosomes and its wider implications. , 1987, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.
[194] R. Wells,et al. Left-handed DNA in vivo. , 1987, Science.
[195] R. Kolodner,et al. Effect of DNA structure and nucleotide sequence on Holliday junction resolution by a Saccharomyces cerevisiae endonuclease. , 1988, Journal of molecular biology.
[196] Yolk proteins from nematodes, chickens, and frogs bind strongly and preferentially to left-handed Z-DNA. , 1988, The Journal of biological chemistry.
[197] Thomas D. Tullius,et al. Structural details of an adenine tract that does not cause DNA to bend , 1988, Nature.
[198] R. Umek,et al. The ease of DNA unwinding as a determinant of initiation at yeast replication origins , 1988, Cell.
[199] Effect of base composition at the center of inverted repeated DNA sequences on cruciform transitions in DNA. , 1988, The Journal of biological chemistry.
[200] B. S. Rao,et al. Pausing in simian virus 40 DNA replication by a sequence containing (dG-dA)27.(dT-dC)27. , 1988, Nucleic acids research.
[201] A. Rich,et al. Z-DNA-binding proteins in Escherichia coli purification, generation of monoclonal antibodies and gene isolation. , 1988, Journal of molecular biology.
[202] R. Wells,et al. Multiple DNA secondary structures in perfect inverted repeat inserts in plasmids. Right-handed B-DNA, cruciforms, and left-handed Z-DNA. , 1988, The Journal of biological chemistry.
[203] Y. Kohwi,et al. Magnesium ion-dependent triple-helix structure formed by homopurine-homopyrimidine sequences in supercoiled plasmid DNA. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[204] N C Seeman,et al. A Holliday recombination intermediate is twofold symmetric. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[205] D. Tremethick,et al. Effects of high mobility group proteins 1 and 2 on initiation and elongation of specific transcription by RNA polymerase II in vitro. , 1988, Nucleic acids research.
[206] G. Gilmore,et al. Site of unequal sister chromatid exchange contains a potential Z-DNA-forming tract. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[207] W. Olson,et al. Base sequence effects in double‐helical DNA. II. Configurational statistics of rodlike chains , 1988, Biopolymers.
[208] E. Alexandrova,et al. Acetylated HMG1 protein interacts specifically with homologous DNA polymerase alpha in vitro. , 1988, Biochemical and biophysical research communications.
[209] M. Yoshida,et al. Nonhistone protein HMG1 removes the transcriptional block caused by left-handed Z-form segment in a supercoiled DNA. , 1988, Biochemical and biophysical research communications.
[210] J. Diffley,et al. Purification of a yeast protein that binds to origins of DNA replication and a transcriptional silencer. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[211] F. Watt,et al. High mobility group proteins 1 and 2 stimulate binding of a specific transcription factor to the adenovirus major late promoter. , 1988, Nucleic acids research.
[212] Sinden Rr,et al. Analysis of trimethylpsoralen photoreactivity to Z-DNA provides a general in vivo assay for Z-DNA: analysis of the hypersensitivity of (GT)n B-Z junctions. , 1988 .
[213] M. Bianchi,et al. Interaction of a protein from rat liver nuclei with cruciform DNA. , 1988, The EMBO journal.
[214] R. Wells,et al. The chemistry and biology of unusual DNA structures adopted by oligopurine · oligopyrimidine sequences , 1988, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.
[215] Long range structural communication between sequences in supercoiled DNA. Sequence dependence of contextual influence on cruciform extrusion mechanism. , 1988, The Journal of biological chemistry.
[216] L. Loeb,et al. An E. coli promoter that regulates transcription by DNA superhelix-induced cruciform extrusion. , 1988, Science.
[217] R. Wells,et al. The role of DNA sequence in the formation of Z-DNA versus cruciforms in plasmids. , 1988, The Journal of biological chemistry.
[218] R. Wells,et al. Influence of DNA sequence on the formation of non-B right-handed helices in oligopurine.oligopyrimidine inserts in plasmids. , 1988, The Journal of biological chemistry.
[219] G. Merlino,et al. Modulation of epidermal growth factor receptor proto-oncogene transcription by a promoter site sensitive to S1 nuclease , 1988, Molecular and cellular biology.
[220] Leroy F. Liu,et al. Transcription generates positively and negatively supercoiled domains in the template , 1988, Cell.
[221] F. Vogel,et al. Condensation of vector DNA by the chromosomal protein HMG1 results in efficient transfection. , 1988, Biochimica et biophysica acta.
[222] L. Frappier,et al. Effect of anti‐cruciform DNA monoclonal antibodies on DNA replication. , 1988, The EMBO journal.
[223] R. Wells,et al. Non-B right-handed DNA conformations of homopurine.homopyrimidine sequences in the murine immunoglobulin C alpha switch region. , 1988, The Journal of biological chemistry.
[224] DNA supercoiling and eukaryotic gene expression. , 1988, Oxford surveys on eukaryotic genes.
[225] J. Wang,et al. Influence of DNA sequence and supercoiling on the process of cruciform formation. , 1988, Journal of molecular biology.
[226] B. Johnston,et al. The S1-sensitive form of d(C-T)n.d(A-G)n: chemical evidence for a three-stranded structure in plasmids. , 1988, Science.
[227] W. Gilbert,et al. Formation of parallel four-stranded complexes by guanine-rich motifs in DNA and its implications for meiosis , 1988, Nature.
[228] R. Tjian,et al. Transcription factors that activate the Ultrabithorax promoter in developmentally staged extracts , 1988, Cell.
[229] M. Guéron,et al. Evidence from base-pair kinetics for two types of adenine tract structures in solution: their relation to DNA curvature. , 1988, Biochemistry.
[230] Structural interconversion of alternating purine-pyrimidine inverted repeats cloned in supercoiled plasmids. , 1988, Nucleic acids research.
[231] J. Ramstein,et al. Energetic coupling between DNA bending and base pair opening. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[232] N. Seeman,et al. Construction and analysis of monomobile DNA junctions. , 1988, Biochemistry.
[233] J. Van De Sande,et al. Parallel stranded DNA. , 1988, Science.
[234] H R Drew,et al. The intrinsic curvature of DNA in solution. , 1988, Journal of molecular biology.
[235] C. Higgins,et al. DNA supercoiling and the anaerobic and growth phase regulation of tonB gene expression , 1988, Journal of bacteriology.
[236] A. Rich,et al. Identification of homologous pairing and strand-exchange activity from a human tumor cell line based on Z-DNA affinity chromatography. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[237] S. J. Flint,et al. Site-specific oligonucleotide binding represses transcription of the human c-myc gene in vitro. , 1988, Science.
[238] P. Hagerman. Flexibility of DNA. , 1988, Annual review of biophysics and biophysical chemistry.
[239] M. Savino,et al. Kinetic persistence of cruciform structures in reconstituted minichromosomes. , 1988, Biochimica et biophysica acta.
[240] Characteristics of Z-DNA helices formed by imperfect (purine-pyrimidine) sequences in plasmids. , 1988, The Journal of biological chemistry.
[241] D. Lilley,et al. The structure of the holliday junction, and its resolution , 1988, Cell.
[242] R. Sinden,et al. Hyperreactivity of B-Z junctions to 4,5',8-trimethylpsoralen photobinding assayed by an exonuclease III/photoreversal mapping procedure. , 1989, Journal of molecular biology.
[243] S. J. Flint,et al. A nuclease-hypersensitive element of the human c-myc promoter interacts with a transcription initiation factor , 1989, Molecular and cellular biology.
[244] R. Wells,et al. Left-handed Z-DNA and genetic recombination. , 1989, Progress in nucleic acid research and molecular biology.
[245] D Kowalski,et al. The DNA unwinding element: a novel, cis‐acting component that facilitates opening of the Escherichia coli replication origin. , 1989, The EMBO journal.
[246] T. Cech,et al. Monovalent cation-induced structure of telomeric DNA: The G-quartet model , 1989, Cell.
[247] N. Seiler,et al. On the subcellular localization of the polyamines. , 1989, Biological chemistry Hoppe-Seyler.
[248] V. P. Kumarev,et al. Energetics of the B-H transition in supercoiled DNA carrying d(CT)x.d(AG)x and d(C)n.d(G)n inserts. , 1989, Nucleic acids research.
[249] D. Lilley,et al. Fluorescence energy transfer shows that the four-way DNA junction is a right-handed cross of antiparallel molecules , 1989, Nature.
[250] T. Kelly,et al. Transcriptional activator nuclear factor I stimulates the replication of SV40 minichromosomes in vivo and in vitro , 1989, Cell.
[251] D. Lilley,et al. Localized chemical hyperreactivity in supercoiled DNA: evidence for base unpairing in sequences that induce low-salt cruciform extrusion. , 1989, Biochemistry.
[252] A. Travers,et al. DNA conformation and protein binding. , 1989, Annual review of biochemistry.
[253] T. Rabbitts,et al. Alternating purine‐pyrimidine tracts may promote chromosomal translocations seen in a variety of human lymphoid tumours. , 1989, The EMBO journal.
[254] A. Furano,et al. Insertion of L1 elements into sites that can form non-B DNA. Interactions of non-B DNA-forming sequences. , 1989, The Journal of biological chemistry.
[255] Supercoil‐stabilized left‐handed DNA in the plasmid (dA‐dT)16 insert formed in the presence of Ni2+ , 1989, FEBS letters.
[256] L. Frappier,et al. Characterization of the binding specificity of two anticruciform DNA monoclonal antibodies. , 1989, The Journal of biological chemistry.
[257] R. Wells,et al. Tetracycline promoter mutations decrease non-B DNA structural transitions, negative linking differences and deletions in recombinant plasmids in Escherichia coli. , 1989, Journal of molecular biology.
[258] S. Boxer,et al. Multinuclear NMR studies of DNA hairpins. 2. Sequence-dependent structural variations. , 1989, Biochemistry.
[259] R. Wells,et al. Stabilization of Z DNA in vivo by localized supercoiling. , 1989, Science.
[260] Transcription regulation in vitro by an E. coli promoter containing a DNA cruciform in the '-35' region. , 1989, Nucleic acids research.
[261] R. Wells,et al. Intramolecular DNA triplexes in supercoiled plasmids. II. Effect of base composition and noncentral interruptions on formation and stability. , 1989, The Journal of biological chemistry.
[262] D. Rhodes,et al. The DNA binding site of the Xenopus transcription factor IIIA has a non‐B‐form structure. , 1989, The EMBO journal.
[263] J. S. Lee,et al. Triplex DNA in plasmids and chromosomes. , 1989, Gene.
[264] J. Dahlberg,et al. Topology and formation of triple-stranded H-DNA. , 1989, Science.
[265] M. Beltrame,et al. Specific recognition of cruciform DNA by nuclear protein HMG1. , 1989, Science.
[266] D. Crothers,et al. Structural basis for DNA bending. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[267] P. Hagerman,et al. DNA ring closure mediated by protein HU. , 1989, The Journal of biological chemistry.
[268] Steven D. Goodman,et al. Functional replacement of a protein-induced bend in a DNA recombination site , 1989, Nature.
[269] H. Manor,et al. (dT-dC)n and (dG-dA)n tracts arrest single stranded DNA replication in vitro. , 1989, Nucleic acids research.
[270] O. Brison,et al. Structure of four amplified DNA novel joints , 1989, Somatic cell and molecular genetics.
[271] L. Bracco,et al. Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli. , 1989, The EMBO journal.
[272] A. Firulli,et al. Ribonucleoprotein and protein factors bind to an H-DNA-forming c-myc DNA element: possible regulators of the c-myc gene. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[273] A. Rich,et al. The level of Z-DNA in metabolically active, permeabilized mammalian cell nuclei is regulated by torsional strain , 1989, The Journal of cell biology.
[274] Large inverted duplications in amplified DNA of mammalian cells form hairpins in vitro upon DNA extraction but not in vivo. , 1989, Nucleic acids research.
[275] L. Neckers,et al. Characterization of oligonucleotide transport into living cells. , 1989, Proceedings of the National Academy of Sciences of the United States of America.
[276] H R Drew,et al. Influence of the sequence-dependent flexure of DNA on transcription in E. coli. , 1989, Nucleic acids research.
[277] J. Bargonetti,et al. Initiation of rolling-circle replication in pT181 plasmid: initiator protein enhances cruciform extrusion at the origin. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[278] S. Elgin,et al. Optimal heat-induced expression of the Drosophila hsp26 gene requires a promoter sequence containing (CT)n.(GA)n repeats. , 1990, Journal of molecular biology.
[279] J. Brahms,et al. DNA with adenine tracts contains poly(dA).poly(dT) conformational features in solution. , 1990, Nucleic acids research.
[280] M. Murphy,et al. An S1 nuclease-sensitive homopurine/homopyrimidine domain in the c-Ki-ras promoter interacts with a nuclear factor. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[281] J. Casasnovas,et al. DNA-sequence and metal-ion specificity of the formation of *H-DNA. , 1990, Nucleic acids research.
[282] Z-DNA-binding proteins. Identification critically depends on the proper choice of ligands. , 1990, The Journal of biological chemistry.
[283] L. Loeb,et al. Structure-function relationships in Escherichia coli promoter DNA. , 1990, Progress in nucleic acid research and molecular biology.
[284] D. Jackson,et al. The size of chromatin loops in HeLa cells. , 1990, The EMBO journal.
[285] K. Choo,et al. Analysis of the unoccupied site of an integrated human papillomavirus 16 sequence in a cervical carcinoma. , 1990, Virology.
[286] L. Naylor,et al. d(TG)n.d(CA)n sequences upstream of the rat prolactin gene form Z-DNA and inhibit gene transcription. , 1990, Nucleic acids research.
[287] S. Lavi,et al. Carcinogen-induced DNA amplification in vitro: overreplication of the simian virus 40 origin region in extracts from carcinogen-treated CO60 cells , 1990, Molecular and cellular biology.
[288] R. Wells,et al. Effect of length, supercoiling, and pH on intramolecular triplex formation. Multiple conformers at pur.pyr mirror repeats. , 1990, The Journal of biological chemistry.
[289] D. Crothers,et al. Determination of the extent of DNA bending by an adenine-thymine tract. , 1990, Biochemistry.
[290] Dipankar Sen,et al. A sodium-potassium switch in the formation of four-stranded G4-DNA , 1990, Nature.
[291] D. Lilley,et al. Superhelical torsion in cellular DNA responds directly to environmental and genetic factors. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[292] M. Zannis‐Hadjopoulos,et al. The dynamic distribution and quantification of DNA cruciforms in eukaryotic nuclei. , 1990, Experimental cell research.
[293] G. R. Smith,et al. Action of RecBCD enzyme on cruciform DNA. , 1990, Journal of molecular biology.
[294] J. Glover,et al. Protonated polypurine/polypyrimidine DNA tracts that appear to lack the single-stranded pyrimidine loop predicted by the "H" model. , 1990, Journal of molecular biology.
[295] S. Brahmachari,et al. Supercoil-induced unusual DNA structures as transcriptional block. , 1990, Nucleic acids research.
[296] R. Austin,et al. Physical studies of DNA premelting equilibria in duplexes with and without homo dA.dT tracts: correlations with DNA bending. , 1990, Biochemistry.
[297] Robin Lovell-Badge,et al. A gene from the human sex-determining region encodes a protein with homology to a conserved DNA-binding motif , 1990, Nature.
[298] D. Landsman,et al. Structural features of the HMG chromosomal proteins and their genes. , 1990, Biochimica et biophysica acta.
[299] H. V. van Vlijmen,et al. A study of model energetics and conformational properties of polynucleotide triplexes , 1990, Biopolymers.
[300] B. Wold,et al. Kinetic analysis of oligodeoxyribonucleotide-directed triple-helix formation on DNA. , 1990, Biochemistry.
[301] S. Mirkin,et al. Formation of intramolecular triplex in homopurine-homopyrimidine mirror repeats with point substitutions. , 1990, Nucleic acids research.
[302] Nicholas R. Cozzarelli,et al. DNA topology and its biological effects , 1990 .
[303] Leroy F. Liu,et al. 11 DNA Replication: Topological Aspects and the Roles of DNA Topoisomerases , 1990 .
[304] G. Mavrothalassitis,et al. Molecular and functional characterization of the promoter of ETS2, the human c-ets-2 gene. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[305] N. Seeman,et al. Construction and analysis of parallel and antiparallel Holliday junctions. , 1990, The Journal of biological chemistry.
[306] T. Mizuno,et al. An Escherichia coli protein that preferentially binds to sharply curved DNA. , 1990, Journal of biochemistry.
[307] D. Lilley,et al. The role of metal ions in the conformation of the four‐way DNA junction. , 1990, The EMBO journal.
[308] M. Yoshida,et al. Chromosomal protein HMG1 removes the transcriptional block caused by the cruciform in supercoiled DNA. , 1990, The Journal of biological chemistry.
[309] U. Müller,et al. Effect of in vitro transcription on cruciform stability. , 1990, Nucleic acids research.
[310] H. Vogel,et al. Perturbation of DNA hairpins containing the EcoRI recognition site by hairpin loops of varying size and composition: physical (NMR and UV) and enzymatic (EcoRI) studies. , 1990, Nucleic acids research.
[311] M. Frank-Kamenetskii,et al. Protection against UV-induced pyrimidine dimerization in DNA by triplex formation , 1990, Nature.
[312] B. Lebleu,et al. Antibody-targeted liposomes containing oligodeoxyribonucleotides complementary to viral RNA selectively inhibit viral replication. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[313] J. Klysik,et al. Dam methyltransferase sites located within the loop region of the oligopurine-oligopyrimidine sequences capable of forming H-DNA are undermethylated in vivo. , 1990, Nucleic acids research.
[314] M. Groudine,et al. Transcription elongation and eukaryotic gene regulation. , 1990, Oncogene.
[315] R. Wells,et al. Multiple non-B-DNA conformations of polypurine.polypyrimidine sequences in plasmids. , 1990, Biochemistry.
[316] Robert Tjian,et al. Nucleolar transcription factor hUBF contains a DNA-binding motif with homology to HMG proteins , 1990, Nature.
[317] J. E. Mueller,et al. Resolution of Holliday junction analogs by T4 endonuclease VII can be directed by substrate structure. , 1990, The Journal of biological chemistry.
[318] R. Wells,et al. Left-handed Z-DNA and intramolecular triplex formation at the site of an unequal sister chromatid exchange. , 1990, The Journal of biological chemistry.
[319] M. Riley,et al. The Bacterial Chromosome , 1990 .
[320] J. Singh,et al. High mobility group proteins 1 and 2 function as general class II transcription factors. , 1990, Biochemistry.
[321] C. D. Lewis,et al. Properties of BGP1, a poly(dG)-binding protein from chicken erythrocytes. , 1990, Nucleic acids research.
[322] K. Drlica,et al. Bacterial topoisomerases and the control of DNA supercoiling. , 1990, Trends in genetics : TIG.
[323] W P Wahls,et al. The Z-DNA motif d(TG)30 promotes reception of information during gene conversion events while stimulating homologous recombination in human cells in culture , 1990, Molecular and cellular biology.
[324] E. Paleček,et al. Protonated triplex DNA in E. coli cells as detected by chemical probing , 1990, FEBS letters.
[325] P. Dervan,et al. Recognition of mixed-sequence duplex DNA by alternate-strand triple-helix formation , 1990 .
[326] Y. Chung,et al. Regulatory elements mediating transcription from the Drosophila melanogaster actin 5C proximal promoter , 1990, Molecular and cellular biology.
[327] N. Osheroff,et al. Eukaryotic topoisomerases recognize nucleic acid topology by preferentially interacting with DNA crossovers. , 1990, The EMBO journal.
[328] S. West,et al. Specificity of binding to four-way junctions in DNA by bacteriophage T7 endonuclease I. , 1990, Nucleic acids research.
[329] M. Bischoff,et al. High mobility group proteins 1 and 2 bind preferentially to brominated poly(dG‐dC)·poly(dG‐dC) in the Z‐DNA conformation but not to other types of Z‐DNA , 1990, FEBS letters.
[330] E. Kun,et al. The interaction of adenosine diphosphoribosyl transferase (ADPRT) with a cruciform DNA. , 1990, Biochemical and biophysical research communications.
[331] S. West,et al. Interaction of a four-way junction in DNA with T4 endonuclease VII. , 1990, The Journal of biological chemistry.
[332] H. Bujard,et al. Principles Governing the Activity of E. coli Promoters , 1990 .
[333] G. Yagil,et al. Paranemic structures of DNA and their role in DNA unwinding. , 1991, Critical reviews in biochemistry and molecular biology.
[334] D. Lilley,et al. Effects of base mismatches on the structure of the four-way DNA junction. , 1991, Journal of molecular biology.
[335] M. Zannis‐Hadjopoulos,et al. DNA cruciforms and the nuclear supporting structure. , 1991, Experimental cell research.
[336] L. Hsieh,et al. Bacterial DNA supercoiling and [ATP]/[ADP]. Changes associated with a transition to anaerobic growth. , 1991, Journal of molecular biology.
[337] N. Heintz,et al. Position and orientation-dependent effects of a eukaryotic Z-triplex DNA motif on episomal DNA replication in COS-7 cells. , 1991, The Journal of biological chemistry.
[338] J. Besterman,et al. DNA triple-helix formation at physiologic pH and temperature. , 1991, Antisense research and development.
[339] D. Lilley,et al. Large-scale stable opening of supercoiled DNA in response to temperature and supercoiling in (A + T)-rich regions that promote low-salt cruciform extrusion. , 1991, Biochemistry.
[340] R. Camerini-Otero,et al. A triplex DNA-binding protein from human cells: purification and characterization. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[341] HMG1-related DNA-binding protein isolated with V-(D)-J recombination signal probes. , 1991, Molecular and cellular biology.
[342] C. C. Hardin,et al. Monovalent cation induced structural transitions in telomeric DNAs: G-DNA folding intermediates. , 1991, Biochemistry.
[343] S. J. Flint,et al. Evidence that a triplex-forming oligodeoxyribonucleotide binds to the c-myc promoter in HeLa cells, thereby reducing c-myc mRNA levels. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[344] R. Kole,et al. Stability of antisense DNA oligodeoxynucleotide analogs in cellular extracts and sera. , 1991, Life sciences.
[345] Stabilization of PyPuPu triplexes with bivalent cations. , 1991, Nucleic acids symposium series.
[346] B. Pettitt,et al. Binding of triple helix forming oligonucleotides to sites in gene promoters. , 1991, Biochemistry.
[347] E. Heard,et al. The role of inverted duplication in the generation of gene amplification in mammalian cells. , 1991, Biochimica et biophysica acta.
[348] E. Paleček,et al. Local supercoil-stabilized DNA structures. , 1991, Critical reviews in biochemistry and molecular biology.
[349] R. Simpson,et al. Nucleosome positioning: occurrence, mechanisms, and functional consequences. , 1991, Progress in nucleic acid research and molecular biology.
[350] T. Steitz,et al. Crystal structure of a CAP-DNA complex: the DNA is bent by 90 degrees , 1991, Science.
[351] C. Radding. Helical interactions in homologous pairing and strand exchange driven by RecA protein. , 1991, The Journal of biological chemistry.
[352] S. Mirkin,et al. H-DNA and Z-DNA in the mouse c-Ki-ras promoter. , 1991, Nucleic acids research.
[353] D. Lilley,et al. Model for the interaction of DNA junctions and resolving enzymes. , 1991, Journal of molecular biology.
[354] R Grosschedl,et al. LEF-1, a gene encoding a lymphoid-specific protein with an HMG domain, regulates T-cell receptor alpha enhancer function [corrected]. , 1991, Genes & development.
[355] P. Crosson,et al. Polyamines favor DNA triplex formation at neutral pH. , 1991, Biochemistry.
[356] A. Rich,et al. Transcription is associated with Z-DNA formation in metabolically active permeabilized mammalian cell nuclei. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[357] D M Crothers,et al. Specificity and stringency in DNA triplex formation. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[358] S. Brahmachari,et al. Distribution of simple repetitive (TG/CA)n and (CT/AG)n sequences in human and rodent genomes. , 1991, Journal of biomolecular structure & dynamics.
[359] L. DeLucas,et al. Crystallization and preliminary X-ray investigation of factor D of human complement. , 1991, Journal of molecular biology.
[360] L. Bossi,et al. Common sequence determinants of the response of a prokaryotic promoter to DNA bending and supercoiling. , 1991, The EMBO journal.
[361] P. Bucher,et al. Occurrence of oligopurine.oligopyrimidine tracts in eukaryotic and prokaryotic genes. , 1991, DNA sequence : the journal of DNA sequencing and mapping.
[362] M. Sporn,et al. Sequence specific protein binding to and activation of the TGF-beta 3 promoter through a repeated TCCC motif. , 1991, Nucleic acids research.
[363] H. Shinagawa,et al. SOS-inducible DNA repair proteins, RuvA and RuvB, of Escherichia coli: functional interactions between RuvA and RuvB for ATP hydrolysis and renaturation of the cruciform structure in supercoiled DNA. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[364] Y. Kohwi,et al. Detection of triple-helix related structures adopted by poly(dG)-poly(dC) sequences in supercoiled plasmid DNA. , 1991, Nucleic acids research.
[365] R. G. Lloyd,et al. Formation and resolution of recombination intermediates by E. coliRecA and RuvC proteins , 1991, Nature.
[366] B. Roques,et al. Removal of DNA curving by DNA ligands: gel electrophoresis study. , 1991, Biochemistry.
[367] J. Workman,et al. Activation domains of stably bound GAL4 derivatives alleviate repression of promoters by nucleosomes , 1991, Cell.
[368] D. Thomas,et al. Oligonucleotide inhibition of IL2R alpha mRNA transcription by promoter region collinear triplex formation in lymphocytes. , 1991, Nucleic acids research.
[369] D. Moras,et al. Groove-backbone interaction in B-DNA. Implication for DNA condensation and recombination. , 1991, Journal of molecular biology.
[370] W. Wilson,et al. Hairpin formation within the enhancer region of the human enkephalin gene. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[371] R. Sinden,et al. Torsionally tuned cruciform and Z-DNA probes for measuring unrestrained supercoiling at specific sites in DNA of living cells. , 1991, Journal of molecular biology.
[372] H. Manor,et al. Formation of DNA triplexes accounts for arrests of DNA synthesis at d(TC)n and d(GA)n tracts. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[373] C. W. Hilbers,et al. The three-dimensional structure of a DNA hairpin in solution two-dimensional NMR studies and structural analysis of d(ATCCTATTTATAGGAT). , 1991, European journal of biochemistry.
[374] David M. J. Lilley,et al. Cleavage of a four‐way DNA junction by a restriction enzyme spanning the point of strand exchange. , 1991, The EMBO journal.
[375] H. A. Yee,et al. Identification of novel single-stranded d(TC)n binding proteins in several mammalian species. , 1991, Nucleic acids research.
[376] R. G. Lloyd,et al. Resolution of Holliday junctions in vitro requires the Escherichia coli ruvC gene product. , 1991, Proceedings of the National Academy of Sciences of the United States of America.
[377] Y. Kohwi,et al. Altered gene expression correlates with DNA structure. , 1991, Genes & development.
[378] J. Feigon,et al. Quadruplex structure of Oxytricha telomeric DNA oligonucleotides , 1992, Nature.
[379] C. Bennett,et al. Cationic lipids enhance cellular uptake and activity of phosphorothioate antisense oligonucleotides. , 1992, Molecular pharmacology.
[380] Binding of single-stranded oligonucleotides to a non-B-form DNA structure results in loss of promoter activity of the platelet-derived growth factor A-chain gene. , 1992, The Journal of biological chemistry.
[381] S. Malkhosyan,et al. Intramolecular dG.dG.dC triplex detected in Escherichia coli cells. , 1992, Journal of molecular biology.
[382] K. Rippe,et al. Parallel-stranded duplex DNA. , 1988, Methods in enzymology.
[383] D. Sen,et al. Guanine quartet structures. , 1992, Methods in enzymology.
[384] R. Rossen,et al. Inhibition of transcription of HIV-1 in infected human cells by oligodeoxynucleotides designed to form DNA triple helices. , 1992, The Journal of biological chemistry.
[385] B. Pettitt,et al. Stabilities of double- and triple-strand helical nucleic acids. , 1992, Progress in biophysics and molecular biology.
[386] A. Rich,et al. Crystal structure of four-stranded Oxytricha telomeric DNA , 1992, Nature.
[387] S. Strobel,et al. Triple helix-mediated single-site enzymatic cleavage of megabase genomic DNA. , 1992, Methods in enzymology.
[388] D. Lilley,et al. The DNA binding site of HMG1 protein is composed of two similar segments (HMG boxes), both of which have counterparts in other eukaryotic regulatory proteins. , 1992, The EMBO journal.
[389] N. Shimizu,et al. Effect of the potential triplex DNA region on the in vitro expression of bacterial beta-lactamase gene in superhelical recombinant plasmids. , 1992, Journal of biochemistry.
[390] N. Cozzarelli,et al. The role of topoisomerase IV in partitioning bacterial replicons and the structure of catenated intermediates in DNA replication , 1992, Cell.
[391] M. Frank-Kamenetskii,et al. Protonated DNA structures. , 1992, Methods in enzymology.
[392] S. Lippard,et al. Specific binding of chromosomal protein HMG1 to DNA damaged by the anticancer drug cisplatin. , 1992, Science.
[393] D. Ussery,et al. Probing DNA structure with psoralen in vitro. , 1992, Methods in enzymology.
[394] W. Garrard,et al. DNA supercoiling in chromatin structure and gene expression. , 1992, Critical reviews in eukaryotic gene expression.
[395] H. Yamazaki,et al. A single-stranded DNA binding protein from mouse tumor cells specifically recognizes the C-rich strand of the (AGG:CCT)n repeats that can alter DNA conformation. , 1992, Nucleic acids research.
[396] G. Schroth,et al. Intrinsically bent DNA flanks both sides of an RNA polymerase I transcription start site. Both regions display novel electrophoretic mobility. , 1992, The Journal of biological chemistry.
[397] D. Morris,et al. Sequestered end products and enzyme regulation: the case of ornithine decarboxylase , 1992, Microbiological reviews.
[398] N. Thuong,et al. Specific inhibition of transcription by triple helix-forming oligonucleotides. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[399] D. Ussery,et al. Analysis of DNA structure in vivo using psoralen photobinding: measurement of supercoiling, topological domains, and DNA-protein interactions. , 1992, Methods in enzymology.
[400] M. Rougée,et al. Kinetics and thermodynamics of triple-helix formation: effects of ionic strength and mismatches. , 1992, Biochemistry.
[401] A. Rich,et al. Zuotin, a putative Z‐DNA binding protein in Saccharomyces cerevisiae. , 1992, The EMBO journal.
[402] A. Stasiak. Three‐stranded DNA structure; is this the secret of DNA homologous recognition? , 1992, Molecular microbiology.
[403] P N Goodfellow,et al. SRY, like HMG1, recognizes sharp angles in DNA. , 1992, The EMBO journal.
[404] R. Snyder,et al. Triplex formation prevents Sp1 binding to the dihydrofolate reductase promoter. , 1992, The Journal of biological chemistry.
[405] G. Wahl,et al. Molecular dissection of mammalian gene amplification: new mechanistic insights revealed by analyses of very early events. , 1992, Mutation research.
[406] S. Neidle,et al. Prediction of the structure of the Y+.R-.R(+)-type DNA triple helix by molecular modelling. , 1992, Nucleic acids research.
[407] W. Chazin,et al. Conformational studies of the duplex d-(CCAAAAATTTCC).d-(GGAAATTTTTGG) containing a (dA)5 tract using two-dimensional 1H-n.m.r. spectroscopy. , 1992, International journal of biological macromolecules.
[408] L. Rothman-Denes,et al. Specific sequences and a hairpin structure in the template strand are required for N4 virion RNA polymerase promoter recognition , 1992, Cell.
[409] S. Brahmachari,et al. Intramolecular triplex potential sequence within a gene down regulates its expression in vivo. , 1992, Nucleic acids research.
[410] J. Mazzarelli,et al. DNA curvature does not require bifurcated hydrogen bonds or pyrimidine methyl groups. , 1992, Journal of molecular biology.
[411] J. Feigon,et al. Proton nuclear magnetic resonance assignments and structural characterization of an intramolecular DNA triplex. , 1992, Journal of molecular biology.
[412] J. W. Chase,et al. Escherichia coli single-stranded DNA-binding protein is a supercoiled template-dependent transcriptional activator of N4 virion RNA polymerase. , 1992, Genes & development.
[413] N. Thuong,et al. Control of Gene Expression by Triple Helix‐Forming Oligonucleotides. The Antigene Strategy a , 1992, Annals of the New York Academy of Sciences.
[414] J. Chubb,et al. Human therapeutics based on triple helix technology. , 1992, Trends in biotechnology.
[415] T. Ley,et al. An intramolecular DNA triplex is disrupted by point mutations associated with hereditary persistence of fetal hemoglobin. , 1992, The Journal of biological chemistry.
[416] R. Wells,et al. Nodule DNA in the (GA)37.(CT)37 insert in superhelical plasmids. , 1992, The Journal of biological chemistry.
[417] A. Harel-Bellan,et al. A triple helix-forming oligonucleotide-intercalator conjugate acts as a transcriptional repressor via inhibition of NF kappa B binding to interleukin-2 receptor alpha-regulatory sequence. , 1992, The Journal of biological chemistry.
[418] P. Dervan,et al. Flanking sequence effects within the pyrimidine triple-helix motif characterized by affinity cleaving. , 1992, Biochemistry.
[419] D. Lilley,et al. Fluorescence resonance energy transfer analysis of the structure of the four-way DNA junction. , 1992, Biochemistry.
[420] S. Mirkin,et al. Transcriptionally driven cruciform formation in vivo. , 1992, Nucleic acids research.
[421] Rukmini Kolluri,et al. A CT promoter element binding protein: definition of a double-strand and a novel single-strand DNA binding motif , 1992, Nucleic Acids Res..
[422] D. Housman,et al. Isolation and characterization of human cDNA clones encoding a high mobility group box protein that recognizes structural distortions to DNA caused by binding of the anticancer agent cisplatin. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[423] B. Wold,et al. Analysis of promoter-specific repression by triple-helical DNA complexes in a eukaryotic cell-free transcription system. , 1992, Biochemistry.
[424] C. Calladine,et al. Understanding DNA: The Molecule & How It Works , 1992 .
[425] F. Pognan,et al. Does cruciform DNA provide a recognition signal for DNA-topoisomerase II? , 1992, Biochimie.
[426] D. Lilley,et al. Helix opening transitions in supercoiled DNA. , 1992, Biochimica et biophysica acta.
[427] M. Aladjem,et al. The mechanism of carcinogen-induced DNA amplification: in vivo and in vitro studies. , 1992, Mutation research.
[428] C. Higgins,et al. The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression , 1992, Cell.
[429] Marco Bianchi,et al. The HMG Box Motif , 1992 .
[430] D. Lilley. HMG has DNA wrapped up , 1992, Nature.
[431] K. Drlica,et al. Control of bacterial DNA supercoiling , 1992, Molecular microbiology.
[432] P. Scaria,et al. Quadruplex structure of d(G3T4G3) stabilized by K+ or Na+ is an asymmetric hairpin dimer. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[433] M. Wold,et al. Binding properties of replication protein A from human and yeast cells , 1992, Molecular and cellular biology.
[434] P. V. von Hippel,et al. Functional transcription elongation complexes from synthetic RNA-DNA bubble duplexes. , 1992, Science.
[435] R. C. Johnson,et al. The nonspecific DNA-binding and -bending proteins HMG1 and HMG2 promote the assembly of complex nucleoprotein structures. , 1993, Genes & development.
[436] S. Mirkin,et al. Suicidal nucleotide sequences for DNA polymerization. , 1993, The EMBO journal.
[437] R. Akeson,et al. A homopurine:homopyrimidine sequence derived from the rat neuronal cell adhesion molecule-encoding gene alters expression in transient transfections. , 1993, Gene.
[438] S. Lippard,et al. High-mobility-group 1 protein mediates DNA bending as determined by ring closures. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[439] J. Wang,et al. Transcription and DNA supercoiling. , 1993, Current opinion in genetics & development.
[440] D. Ussery,et al. Environmental influences on the in vivo level of intramolecular triplex DNA in Escherichia coli. , 1993, Biochemistry.
[441] A. Harel-Bellan,et al. Inhibition of gene expression by triple helix-directed DNA cross-linking at specific sites. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[442] M. Frank-Kamenetskii,et al. Cation and sequence effects on stability of intermolecular pyrimidine-purine-purine triplex. , 1993, Nucleic acids research.
[443] H. Vogel,et al. Two-dimensional NMR and restrained molecular dynamics studies of the hairpin d(T8C4A8): detection of an extraloop cytosine. , 1993, Biochemistry.
[444] Roberto Spurio,et al. Expression of the gene encoding the major bacterial nucleoid protein H‐NS is subject to transcriptional auto‐repression , 1993, Molecular microbiology.
[445] Delivery of antisense oligonucleotides by poly(L-lysine) conjugation and liposome encapsulation. , 1993, Anti-cancer drug design.
[446] I. Brukner,et al. Evidence for opposite groove-directed curvature of GGGCCC and AAAAA sequence elements. , 1993, Nucleic acids research.
[447] R. Austin,et al. Thermodynamics and premelting conformational changes of phased (dA)5 tracts. , 1993, Biochemistry.
[448] P. Hsieh,et al. Formation of a single base mismatch impedes spontaneous DNA branch migration. , 1993, Journal of molecular biology.
[449] H. Manor,et al. Characterization of a multisubunit human protein which selectively binds single stranded d(GA)n and d(GT)n sequence repeats in DNA. , 1993, Nucleic acids research.
[450] V. Dobrynin,et al. Triplex model of chromosome ends , 1993, Nature.
[451] R. Sinden,et al. Amplified primer extension assay for psoralen photoproducts provides a sensitive assay for a (CG)6TA(CG)2(TG)8 Z-DNA torsionally tuned probe: preferential psoralen photobinding to one strand of a B-Z junction. , 1993, Biochemistry.
[452] Crystal structure of CATGGCCATG and its implications for A-tract bending models. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[453] S. J. Flint,et al. Human c-myc transcription factor PuF identified as nm23-H2 nucleoside diphosphate kinase, a candidate suppressor of tumor metastasis. , 1993, Science.
[454] E. Bremer,et al. Synthesis of the Escherichia coli K‐12 nucleoid‐associated DNA‐binding protein H‐NS is subjected to growth‐phase control and autoregulation , 1993, Molecular microbiology.
[455] Y. Kohwi,et al. Transcription-dependent recombination induced by triple-helix formation. , 1993, Genes & development.
[456] N. Thuong,et al. Sequence‐Specific Recognition and Modification of Double‐Helical DNA by Oligonucleotides , 1993 .
[457] M. Alunni-Fabbroni,et al. Sequence-specific DNA-triplex formation at imperfect homopurine-homopyrimidine sequences within a DNA plasmid. , 1993, European journal of biochemistry.
[458] T. Thomas,et al. Selectivity of polyamines in triplex DNA stabilization. , 1993, Biochemistry.
[459] T. Jovin,et al. Z-DNA binding and inhibition by GTP of Drosophila topoisomerase II. , 1993, Biochemistry.
[460] Polypyrimidine/polypurine sequence in plasmid DNA enhances formation of dimer molecules in Escherichia coli. Dimerization of plasmid DNA in Escherichia coli. , 1993, Molecular biology reports.
[461] A. Nicolas,et al. A structural analysis of the bent kinetoplast DNA from Crithidia fasciculata by high resolution chemical probing. , 1993, Nucleic acids research.
[462] D. Lilley,et al. The structure of DNA junctions and their interaction with enzymes. , 1992, European journal of biochemistry.
[463] V. Sasisekharan,et al. Symmetry and molecular structure of a DNA triple helix: d(T)n.d(A)n.d(T)n. , 1993, Biochemistry.
[464] S. Smith,et al. Towards a molecular description of pulsed-field gel electrophoresis. , 1993, Trends in biotechnology.
[465] P. Dröge,et al. Transcription-driven site-specific DNA recombination in vitro. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[466] A possible function of DNA curvature in transcription. , 1993, Nucleic acids symposium series.
[467] D. Natale,et al. Ease of DNA unwinding is a conserved property of yeast replication origins. , 1993, Nucleic acids research.
[468] G. Felsenfeld,et al. A 5′ element of the chicken β-globin domain serves as an insulator in human erythroid cells and protects against position effect in Drosophila , 1993, Cell.
[469] The preprotachykinin A promoter interacts with a sequence specific single stranded DNA binding protein. , 1993, Nucleic acids research.
[470] D. Lilley,et al. The structure of the four-way junction in DNA. , 1993, Annual review of biophysics and biomolecular structure.
[471] R. Brennan,et al. Secondary structure creates mismatched base pairs required for high-affinity binding of cAMP response element-binding protein to the human enkephalin enhancer. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[472] A. Wahl,et al. Binding of a sequence-specific single-stranded DNA-binding factor to the simian virus 40 core origin inverted repeat domain is cell cycle regulated , 1993, Molecular and cellular biology.
[473] P. Sharp,et al. DNA topology and a minimal set of basal factors for transcription by RNA polymerase II , 1993, Cell.
[474] D. Williams,et al. Easily unwound DNA sequences and hairpin structures in the Epstein-Barr virus origin of plasmid replication , 1993, Journal of virology.
[475] C. Hunter,et al. Sequence-dependent DNA structure. The role of base stacking interactions. , 1993, Journal of molecular biology.
[476] B. O’Malley,et al. In vivo transcription of a progesterone-responsive gene is specifically inhibited by a triplex-forming oligonucleotide. , 1993, Nucleic acids research.
[477] P. Hsieh,et al. Parallel DNA triplexes, homologous recombination, and other homology-dependent DNA interactions , 1993, Cell.
[478] D. Millar,et al. Conformational distributions of a four-way DNA junction revealed by time-resolved fluorescence resonance energy transfer. , 1993, Biochemistry.
[479] M. DePamphilis,et al. Origins of DNA replication in metazoan chromosomes. , 1993, The Journal of biological chemistry.
[480] A. Rich,et al. Z-DNA binding protein from chicken blood nuclei. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[481] S. West,et al. Resolution of holliday junctions by RuvC resolvase: Cleavage specificity and DNA distortion , 1993, Cell.
[482] J. S. Lee,et al. Plasmid dimerization mediated by triplex formation between polypyrimidine-polypurine repeats. , 1993, Biochemistry.
[483] H. Clevers,et al. Ancestry and diversity of the HMG box superfamily. , 1993, Nucleic acids research.
[484] R. Gourse,et al. A third recognition element in bacterial promoters: DNA binding by the alpha subunit of RNA polymerase. , 1993, Science.
[485] P. Dervan,et al. Equilibrium association constants for oligonucleotide-directed triple helix formation at single DNA sites: linkage to cation valence and concentration. , 1993, Biochemistry.
[486] Cole Rd,et al. Specific interaction between H1 histone and high mobility protein HMG1. , 1994 .
[487] K. V. van Holde,et al. Binding of histones H1 and H5 and their globular domains to four-way junction DNA. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[488] J. Cognet,et al. A database of 32 DNA triplets to study triple helices by molecular mechanics and dynamics. , 1994, Biophysical chemistry.
[489] P. Goodfellow,et al. The biochemical role of SRY in sex determination , 1994, Molecular reproduction and development.
[490] I. Brukner,et al. Physiological concentration of magnesium ions induces a strong macroscopic curvature in GGGCCC-containing DNA. , 1994, Journal of molecular biology.
[491] M. V. Van Dyke,et al. Oligodeoxyribonucleotide length and sequence effects on intermolecular purine-purine-pyrimidine triple-helix formation. , 1994, Nucleic acids research.
[492] R. Gourse,et al. Factor independent activation of rrnB P1. An "extended" promoter with an upstream element that dramatically increases promoter strength. , 1994, Journal of molecular biology.
[493] S. Mirkin,et al. Trapping DNA polymerases using triplex-forming oligodeoxyribonucleotides. , 1994, Gene.
[494] B. S. Rao,et al. Pausing of simian virus 40 DNA replication fork movement in vivo by (dG-dA)n.(dT-dC)n tracts. , 1994, Gene.
[495] K. Jayaraman,et al. Inhibition of human immunodeficiency virus type 1 activity in vitro by oligonucleotides composed entirely of guanosine and thymidine. , 1994, Journal of acquired immune deficiency syndromes.
[496] V. de Lorenzo,et al. Promoters responsive to DNA bending: a common theme in prokaryotic gene expression. , 1994, Microbiological reviews.
[497] M. Egholm,et al. Peptide nucleic acid.DNA strand displacement loops as artificial transcription promoters. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[498] D. Lilley,et al. The solution structure of the four-way DNA junction at low-salt conditions: a fluorescence resonance energy transfer analysis. , 1994, Biophysical journal.
[499] A. Firulli,et al. DNA triplexes and regulation of the c-myc gene. , 1994, Gene.
[500] Bruce Stillman,et al. Smart machines at the DNA replication fork , 1994, Cell.
[501] R. Wagner,et al. Evidence for a regulatory function of the histone‐like Escherichia coli protein H‐NS in ribosomal RNA synthesis , 1994, Molecular microbiology.
[502] S. Lin,et al. DNA helical instability facilitates initiation at the SV40 replication origin. , 1994, Journal of molecular biology.
[503] M. Churchill,et al. Harnessing the writhe: a role for DNA chaperones in nucleoprotein-complex formation. , 1994, Trends in biochemical sciences.
[504] D. Patel,et al. DNA triplexes: solution structures, hydration sites, energetics, interactions, and function. , 1994, Biochemistry.
[505] M. Egholm,et al. Peptide nucleic acid (PNA). A DNA mimic with a peptide backbone. , 1994, Bioconjugate chemistry.
[506] D M Crothers,et al. Sequence elements responsible for DNA curvature. , 1994, Journal of molecular biology.
[507] M. Bianchi. Prokaryotic HU and eukaryotic HMG1: a kinked relationship , 1994, Molecular microbiology.
[508] Efficient unwinding of triplex DNA by a DNA helicase. , 1994, Biochemical and biophysical research communications.
[509] N. Osheroff,et al. Site-specific cleavage of a DNA hairpin by topoisomerase II. DNA secondary structure as a determinant of enzyme recognition/cleavage. , 1994, The Journal of biological chemistry.
[510] K. Watanabe,et al. Most compact hairpin-turn structure exerted by a short DNA fragment, d(GCGAAGC) in solution: an extraordinarily stable structure resistant to nucleases and heat. , 1994, Nucleic acids research.
[511] R. Iozzo,et al. Structural and functional characterization of the human decorin gene promoter. A homopurine-homopyrimidine S1 nuclease-sensitive region is involved in transcriptional control. , 1994, The Journal of biological chemistry.
[512] K. V. van Holde,et al. Unusual DNA structures, chromatin and transcription. , 1994, BioEssays : news and reviews in molecular, cellular and developmental biology.
[513] M. Churchill,et al. DNA chaperones: A solution to a persistence problem? , 1994, Cell.
[514] H. Buc,et al. Modulated expression of promoters containing upstream curved DNA sequences by the Escherichia coli nucleoid protein H‐NS , 1994, Molecular microbiology.
[515] K. Breslauer,et al. Ligand-induced formation of nucleic acid triple helices. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[516] P. Hsieh,et al. The kinetics of spontaneous DNA branch migration. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[517] A. Firulli,et al. Triplex forming ability of a c-myc promoter element predicts promoter strength. , 1994, Archives of biochemistry and biophysics.
[518] S. Lavi,et al. Hairpin structures are the primary amplification products: a novel mechanism for generation of inverted repeats during gene amplification , 1994, Molecular and cellular biology.
[519] C. Roy,et al. Triple-helix formation interferes with the transcription and hinged DNA structure of the interferon-inducible 6-16 gene promoter. , 1994, European journal of biochemistry.
[520] S. Mirkin,et al. H-DNA and related structures. , 1994, Annual review of biophysics and biomolecular structure.
[521] Y. Agazie,et al. Characterization of a new monoclonal antibody to triplex DNA and immunofluorescent staining of mammalian chromosomes. , 1994, The Journal of biological chemistry.
[522] L. J. Maher,et al. A nuclear factor that binds purine-rich, single-stranded oligonucleotides derived from S1-sensitive elements upstream of the CFTR gene and the MUC1 gene. , 1994, Nucleic acids research.
[523] Importance of stereospecific positioning of the upstream cis-acting DNA element containing a curved DNA structure for the functioning of the Escherichia coli proV promoter. , 1994, Bioscience, biotechnology, and biochemistry.
[524] S. Mirkin,et al. Transcriptional activity of the homopurine-homopyrimidine repeat of the c-Ki-ras promoter is independent of its H-forming potential. , 1994, Nucleic acids research.
[525] M. Alunni-Fabbroni,et al. Pyrimidine phosphorothioate oligonucleotides form triple-stranded helices and promote transcription inhibition. , 1994, Nucleic acids research.
[526] C. Hunt,et al. Characterization of the oligodeoxynucleotide-mediated inhibition of interferon-gamma-induced major histocompatibility complex class I and intercellular adhesion molecule-1. , 1994, The Journal of biological chemistry.
[527] Y. Li,et al. Inhibition of interferon-gamma-mediated immune functions by oligonucleotides. Suppression of human T cell proliferation by downregulation of IFN-gamma-induced ICAM-1 and Fc-receptor on accessory cells. , 1994, Transplantation.
[528] C. E. Pearson,et al. Cruciform DNA binding protein in HeLa cell extracts. , 1994, Biochemistry.
[529] F. Lottspeich,et al. Murine protein which binds preferentially to oligo-C-rich single-stranded nucleic acids. , 1994, Nucleic acids research.
[530] D. Lilley,et al. Elevated unconstrained supercoiling of plasmid DNA generated by transcription and translation of the tetracycline resistance gene in eubacteria. , 1994, Biochemistry.
[531] B. Kempf,et al. Interactions of the nucleoid-associated DNA-binding protein H-NS with the regulatory region of the osmotically controlled proU operon of Escherichia coli. , 1994, The Journal of biological chemistry.
[532] V. Zhurkin,et al. A parallel DNA triplex as a model for the intermediate in homologous recombination. , 1994, Journal of molecular biology.
[533] H H Klump,et al. Electrostatic effects in DNA triple helices. , 1994, Biochemistry.
[534] Osmar Norberto de Souza,et al. Molecular dynamics simulations of oligonucleotides in solution: Visualisation of intrinsic curvature , 1994, J. Comput. Aided Mol. Des..
[535] Michael L. Denton,et al. The RNA polymerase I transcription factor UBF is a sequence-tolerant HMG-box protein that can recognize structured nucleic acids , 1994, Nucleic Acids Res..
[536] V. Schreiber,et al. Kin17, a mouse nuclear zinc finger protein that binds preferentially to curved DNA. , 1994, Nucleic acids research.
[537] G. Zon,et al. The interaction of intercalators and groove‐binding agents with DNA triple‐helical structures: The influence of ligand structure, DNA backbone modifications and sequence , 1994, Journal of molecular recognition : JMR.
[538] E. Eichler,et al. Anomalous rapid electrophoretic mobility of DNA containing triplet repeats associated with human disease genes. , 1995, Biochemistry.
[539] M. Behe. An overabundance of long oligopurine tracts occurs in the genome of simple and complex eukaryotes. , 1995, Nucleic acids research.
[540] C. Hutchison,et al. Insertion site specificity of the transposon Tn3. , 1995, Nucleic acids research.
[541] G. Schroth,et al. Occurrence of potential cruciform and H-DNA forming sequences in genomic DNA. , 1995, Nucleic acids research.
[542] L. J. Maher,et al. Competitive triplex/quadruplex equilibria involving guanine-rich oligonucleotides. , 1995, Biochemistry.
[543] M. Zannis‐Hadjopoulos,et al. A novel type of interaction between cruciform DNA and a cruciform binding protein from HeLa cells. , 1995, The EMBO journal.
[544] C. Saccone,et al. A 67-kDa protein binding to the curved DNA in the main regulatory region of the rat mitochondrial genome. , 1995, Gene.
[545] H. Berman,et al. Analysis of local helix bending in crystal structures of DNA oligonucleotides and DNA-protein complexes. , 1995, Biophysical journal.
[546] S. Harvey,et al. Dehydrating agents sharply reduce curvature in DNAs containing A tracts. , 1995, Nucleic acids research.
[547] P. Hsieh,et al. A pivotal role for the structure of the Holliday junction in DNA branch migration. , 1995, The EMBO journal.
[548] Y. Israel,et al. Inhibition of Gene Expression by Triple Helix Formation in Hepatoma Cells (*) , 1995, The Journal of Biological Chemistry.
[549] J. Mergny,et al. Triple-helix specific ligands stabilize H-DNA conformation. , 1995, Journal of molecular biology.
[550] I. Brukner,et al. Trinucleotide models for DNA bending propensity: comparison of models based on DNaseI digestion and nucleosome packaging data. , 1995, Journal of biomolecular structure & dynamics.
[551] J. Dubochet,et al. Determination of DNA persistence length by cryo-electron microscopy. Separation of the static and dynamic contributions to the apparent persistence length of DNA. , 1995, Journal of molecular biology.
[552] P. Sharp,et al. Pre-bending of a promoter sequence enhances affinity for the TATA-binding factor , 1995, Nature.
[553] C. S. Hulton,et al. DNA twist, flexibility and transcription of the osmoregulated proU promoter of Salmonella typhimurium. , 1995, The EMBO journal.
[554] D J Shapiro,et al. Intrinsically Bent DNA in a Eukaryotic Transcription Factor Recognition Sequence Potentiates Transcription Activation (*) , 1995, The Journal of Biological Chemistry.
[555] P. Moore,et al. Antiparallel, intramolecular triplex DNA stimulates homologous recombination in human cells. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[556] R. Sinden,et al. Stabilization of triple-helical nucleic acids by basic oligopeptides. , 1995, Biochemistry.
[557] M. Zannis‐Hadjopoulos,et al. Anti-cruciform monoclonal antibody and cruciform DNA interaction. , 1995, Journal of molecular biology.
[558] S. West,et al. Relaxing and unwinding on Holliday: DNA helicase-mediated branch migration. , 1995, Mutation research.
[559] I. Brukner,et al. Sequence‐dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides. , 1995, The EMBO journal.
[560] S. Mirkin,et al. Triplex DNA structures. , 1995, Annual review of biochemistry.
[561] L. Hurley,et al. Solution conformation of a bizelesin A-tract duplex adduct: DNA-DNA cross-linking of an A-tract straightens out bent DNA. , 1995, Journal of molecular biology.
[562] B. Montgomery Pettitt,et al. Nanosecond Dynamics and Structure of a Model DNA Triple Helix in Saltwater Solution , 1995 .
[563] V. Potaman,et al. Triple-Helical Nucleic Acids , 1995, Springer New York.