Characterization of genome-wide ordered sequence-tagged Mycobacterium mutant libraries by Cartesian Pooling-Coordinate Sequencing

[1]  Bing Chen,et al.  Specialized Transduction Designed for Precise High-Throughput Unmarked Deletions in Mycobacterium tuberculosis , 2014, mBio.

[2]  C. Vilchèze,et al.  Enhanced Specialized Transduction Using Recombineering in Mycobacterium tuberculosis , 2014, mBio.

[3]  Neville E. Sanjana,et al.  Genome-Scale CRISPR-Cas9 Knockout Screening in Human Cells , 2014, Science.

[4]  S. Raghav,et al.  A yeast one-hybrid and microfluidics-based pipeline to map mammalian gene regulatory networks , 2013, Molecular systems biology.

[5]  Thomas R. Ioerger,et al.  Bayesian analysis of gene essentiality based on sequencing of transposon insertion libraries , 2013, Bioinform..

[6]  Kenneth W. Bayles,et al.  A Genetic Resource for Rapid and Comprehensive Phenotype Screening of Nonessential Staphylococcus aureus Genes , 2013, mBio.

[7]  Thomas R. Ioerger,et al.  High-Resolution Phenotypic Profiling Defines Genes Essential for Mycobacterial Growth and Cholesterol Catabolism , 2011, PLoS pathogens.

[8]  M. Willart,et al.  Disruption of the SapM locus in Mycobacterium bovis BCG improves its protective efficacy as a vaccine against M. tuberculosis , 2011, EMBO molecular medicine.

[9]  N. Krogan,et al.  Phenotypic Landscape of a Bacterial Cell , 2011, Cell.

[10]  Rob Knight,et al.  Identifying genetic determinants needed to establish a human gut symbiont in its habitat. , 2009, Cell host & microbe.

[11]  G. Hannon,et al.  DNA Sudoku--harnessing high-throughput sequencing for multiplexed specimen analysis. , 2009, Genome research.

[12]  E. Rubin,et al.  Scaling down: a PCR-based method to efficiently screen for desired knockouts in a high density Mycobacterium tuberculosis picked mutant library. , 2006 .

[13]  E. Gormley,et al.  The live Mycobacterium tuberculosis phoP mutant strain is more attenuated than BCG and confers protective immunity against tuberculosis in mice and guinea pigs. , 2006, Vaccine.

[14]  Karl W. Broman,et al.  A postgenomic method for predicting essential genes at subsaturation levels of mutagenesis: Application to Mycobacterium tuberculosis , 2003, Proceedings of the National Academy of Sciences of the United States of America.

[15]  Peter M Woollard,et al.  Characterization of a Mycobacterium tuberculosis H37Rv transposon library reveals insertions in 351 ORFs and mutants with altered virulence. , 2002, Microbiology.

[16]  E. Rubin,et al.  Comprehensive identification of conditionally essential genes in mycobacteria , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[17]  J. Mekalanos,et al.  Hyperactive transposase mutants of the Himar1 mariner transposon. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[18]  W. Jacobs,et al.  Conditionally replicating mycobacteriophages: a system for transposon delivery to Mycobacterium tuberculosis. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[19]  E. Rubin,et al.  Transposon site hybridization in Mycobacterium tuberculosis. , 2008, Methods in molecular biology.

[20]  J. Belisle,et al.  Isolation of genomic DNA from mycobacteria. , 1998, Methods in molecular biology.