Determining crystal structures through crowdsourcing and coursework

We show here that computer game players can build high-quality crystal structures. Introduction of a new feature into the computer game Foldit allows players to build and real-space refine structures into electron density maps. To assess the usefulness of this feature, we held a crystallographic model-building competition between trained crystallographers, undergraduate students, Foldit players and automatic model-building algorithms. After removal of disordered residues, a team of Foldit players achieved the most accurate structure. Analysing the target protein of the competition, YPL067C, uncovered a new family of histidine triad proteins apparently involved in the prevention of amyloid toxicity. From this study, we conclude that crystallographers can utilize crowdsourcing to interpret electron density information and to produce structure solutions of the highest quality.

Zoran Popović | Neha Jain | Scott Horowitz | James C A Bardwell | David Baker | Firas Khatib | Jeff Flatten | Seth Cooper | Logan S. Ahlstrom | Brian Koepnick | Raoul Martin | Agnes Tymieniecki | Amanda A Winburn | David S Rogawski | Nicole M Koropatkin | Tsinatkeab T Hailu | Philipp Koldewey | Logan S Ahlstrom | Matthew R Chapman | Andrew P Sikkema | Meredith A Skiba | Finn P Maloney | Felix R M Beinlich | Firas Khatib | Seth Cooper | J. Flatten | S. Kleinfelter | Linda Wei | Nova Barlow | P. Comer | M. Chapman | S. Bliven | Max Chason | K. Harper | J. Bell | J. Bardwell | N. Koropatkin | Slava Butkovich | L. Isaksson | S. Horowitz | P. Riber | E. Cali | Moaz Sinan | Istvan Kovanecz | K. J. Abbey | J. Canfield | P. Koldewey | Sohrab K. Vatsia | F. Rezae | T. Luther | M. Skiba | A. Sikkema | Amanda A. Winburn | Tsinatkeab T. Hailu | Felix R. M. Beinlich | Alice Elizabeth Jensen | Andrew T. Maxwell | Breno Renan de Melo Cruz | Catherine R. Landers | Douglas C. Wheeler | Hugo Paul Perez Chan | James C. Connellan | John Douglas Kroeger | June M. Brownlee | Lisa N. Cummins | Nicholas I. Bolibruch | Nykole Krystyne Crevits | Paulo Sergio Silveira Belo Nascimento Roque | Courtney Elizabeth Killeen | Halie E. Anderson | Jeffrey Thomas Hewlett | Juyoung Samuel Inn | Sin Ye Hwang | D. Buske | Daniel Totonjian | Dawid Jagiela | D. Rogawski | A. Afrin | Nisha Korakavi | Raoul Martin | Lulia A. Kana | Roshun Sankaran | Elizabeth Hull | D. Baker | Bhargavi Maheshwer | Zoran Popovic | B. Koepnick | Agnes Tymieniecki | Neha Jain | F. Maloney | L. Daboul | K. Gam | Karun M Nair | Taylor D. Manett | Mario K. Shammas | S. Schwegmann | Thomas Bausewein | Bruno Kestemont | Lyn Bain | Elaina Michewicz | Bilal Turfe | Barbara Failer | C. Huebner | Stephen Telehany | Lucy Yuan | B. McManus | S. Shnider | Thomas J. Johnson | David Murray | M. Minett | J. Norrgard | A. Sundar | R. Davison | S. Harvey | Christopher Ince | Galal Galal | A. Y. Kim | Joanne Mitchell | M. Britton | Junho Lee | T. V. D. van der Laan | S. Withrow | L. Miller | Steve Parkes | Derek Wolfe | Da-Wei Luan | S. Tamkus | K. Markin | Catherine Neilson | Ahmet Alan Alice Elizabeth Allen Amanda Amy Elizabeth An Caglar Coral Jensen Lubow Boitano Lisle Max | Ahmet Caglar | Alan Coral | Allen Lubow | Amanda Boitano | A. E. Lisle | Bartosz Kaszubowski | Bohdan Hrytsiv | Brancaccio Vincenzo | Carl Vardeman | Casey Comisky | D. M. Copeland | Dietmar Janz | Emmanuel Croze | F. Martin | Gil Beecher | G. A. de Jong | Guy Ykman | Harald Feldmann | I. Vasilchenko | J. L. Borman | Jebbie Kanfer | Janice Slone | J. Oh | J. Bishop | Jonas Schinkler | Joseph McLaughlin | K. Fellbaum | L. Carpenter | Maarten Desnouck | Manasa G. Sharma | Marc D. Belcastro | Martin Szew | Matthias Gaebel | Max Power | Michael Cassidy | Michael Pfützenreuter | Michiel Wesselingh | M. Yi | Neil Cameron | Noah Benevides | Norah Kathleen Kerr | Paul Dunn | Petri Pikkanen | Raafay Shehzad | R. Viosca | Robert James Fraser | Robert Leduc | Roman Madala | Sharon de Boisblanc | Stephen Hettler | Sven Michael Holst | Vera Simon | Warwick Pulley | William Hull | Annes Yukyung Alexis Amanda Anjali Anna-Lisa Antara Bhar Kim Lawton Ruesch Sundar Lawrence Afrin Mah | Alexis Lawton | Amanda Ruesch | Anna L. Lawrence | Dalia Antebi-Lerrman | Duc Pham | Emily Pardington | Grace Sun | Grace Chen | Jane Chang | Jennifer Sterbenz | J. Lim | Joshua Morof | Kaitlin Hahm | K. Roth | Katie Schramm | Kevin Toni Eid | Lisha Murphy | Nicholas Andrew Tooley | Pragya Magur | Quresh Savliwala | Sam Lee | Shirley Chen | Timothy Ryan Brash | W. Kuhlman | Yeonjung Park

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