Unique organization and unprecedented diversity of the Bacteroides (Pseudobacteroides) cellulosolvens cellulosome system
暂无分享,去创建一个
Sagar M. Utturkar | B. Henrissat | E. Bayer | R. Lamed | Steven D. Brown | S. Utturkar | B. Dassa | Sarah Moraïs | Olga Zhivin
[1] Lior Artzi,et al. Cellulosomes: bacterial nanomachines for dismantling plant polysaccharides , 2016, Nature Reviews Microbiology.
[2] B. Henrissat,et al. Broad phylogeny and functionality of cellulosomal components in the bovine rumen microbiome , 2016, Environmental microbiology.
[3] J. Liao,et al. Fuelling the future: microbial engineering for the production of sustainable biofuels , 2016, Nature Reviews Microbiology.
[4] Yali Cao,et al. Enhancing anaerobic digestion of lignocellulosic materials in excess sludge by bioaugmentation and pre-treatment. , 2016, Waste management.
[5] E. Bayer,et al. Enzymatic profiling of cellulosomal enzymes from the human gut bacterium, Ruminococcus champanellensis, reveals a fine-tuned system for cohesin-dockerin recognition. , 2016, Environmental microbiology.
[6] Qi Xu,et al. Dramatic performance of Clostridium thermocellum explained by its wide range of cellulase modalities , 2016, Science Advances.
[7] Sagar M. Utturkar,et al. Near-Complete Genome Sequence of the Cellulolytic Bacterium Bacteroides (Pseudobacteroides) cellulosolvens ATCC 35603 , 2015, Genome Announcements.
[8] B. White,et al. Ruminococcal cellulosome systems from rumen to human. , 2015, Environmental microbiology.
[9] E. Bayer,et al. Standalone cohesin as a molecular shuttle in cellulosome assembly , 2015, FEBS letters.
[10] E. Bayer,et al. Clostridium clariflavum: Key Cellulosome Players Are Revealed by Proteomic Analysis , 2015, mBio.
[11] E. Bayer,et al. Combined Crystal Structure of a Type I Cohesin , 2015, The Journal of Biological Chemistry.
[12] B. Henrissat,et al. Rumen Cellulosomics: Divergent Fiber-Degrading Strategies Revealed by Comparative Genome-Wide Analysis of Six Ruminococcal Strains , 2014, PloS one.
[13] E. Bayer,et al. Cellulosomics of the cellulolytic thermophile Clostridium clariflavum , 2014, Biotechnology for Biofuels.
[14] T. Fujita,et al. Description of Anaerobacterium chartisolvens gen. nov., sp. nov., an obligately anaerobic bacterium from Clostridium rRNA cluster III isolated from soil of a Japanese rice field, and reclassification of Bacteroides cellulosolvens Murray et al. 1984 as Pseudobacteroides cellulosolvens gen. nov., comb , 2014, International journal of systematic and evolutionary microbiology.
[15] H. Fierobe,et al. Characterization of All Family-9 Glycoside Hydrolases Synthesized by the Cellulosome-producing Bacterium Clostridium cellulolyticum* , 2014, The Journal of Biological Chemistry.
[16] Pedro M. Coutinho,et al. The carbohydrate-active enzymes database (CAZy) in 2013 , 2013, Nucleic Acids Res..
[17] E. Shapiro,et al. A synthetic biology approach for evaluating the functional contribution of designer cellulosome components to deconstruction of cellulosic substrates , 2013, Biotechnology for Biofuels.
[18] E. Bayer,et al. Intramolecular clasp of the cellulosomal Ruminococcus flavefaciens ScaA dockerin module confers structural stability☆ , 2013, FEBS open bio.
[19] B. White,et al. Crystal Structure of an Uncommon Cellulosome-Related Protein Module from Ruminococcus flavefaciens That Resembles Papain-Like Cysteine Peptidases , 2013, PloS one.
[20] Christopher L. Hemme,et al. Genome-wide analysis of acetivibrio cellulolyticus provides a blueprint of an elaborate cellulosome system , 2012, BMC Genomics.
[21] Miriam L. Land,et al. Draft Genome Sequences for Clostridium thermocellum Wild-Type Strain YS and Derived Cellulose Adhesion-Defective Mutant Strain AD2 , 2012, Journal of bacteriology.
[22] E. Bayer,et al. High-throughput screening of cohesin mutant libraries on cellulose microarrays. , 2012, Methods in enzymology.
[23] E. Bayer,et al. Designer cellulosomes for enhanced hydrolysis of cellulosic substrates. , 2012, Methods in enzymology.
[24] S. Brunak,et al. SignalP 4.0: discriminating signal peptides from transmembrane regions , 2011, Nature Methods.
[25] A. Travis,et al. Abundance and Diversity of Dockerin-Containing Proteins in the Fiber-Degrading Rumen Bacterium, Ruminococcus flavefaciens FD-1 , 2010, PloS one.
[26] Harry J. Gilbert,et al. Cellulosomes: highly efficient nanomachines designed to deconstruct plant cell wall complex carbohydrates. , 2010, Annual review of biochemistry.
[27] B. Henrissat,et al. Modulation of cellulosome composition in Clostridium cellulolyticum: Adaptation to the polysaccharide environment revealed by proteomic and carbohydrate‐active enzyme analyses , 2010, Proteomics.
[28] K. Nelson,et al. The FibRumBa Database: A Resource for Biologists with Interests in Gastrointestinal Microbial Ecology, Plant Biomass Degradation, and Anaerobic Microbiology , 2010, Microbial Ecology.
[29] K. Sakka,et al. Functional insights into the role of novel type I cohesin and dockerin domains from Clostridium thermocellum. , 2009, The Biochemical journal.
[30] Alvaro G. Hernandez,et al. Diversity and Strain Specificity of Plant Cell Wall Degrading Enzymes Revealed by the Draft Genome of Ruminococcus flavefaciens FD-1 , 2009, PloS one.
[31] H. Fierobe,et al. The cellulosomes from Clostridium cellulolyticum , 2009, The FEBS journal.
[32] Brandi L. Cantarel,et al. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics , 2008, Nucleic Acids Res..
[33] Raphael Lamed,et al. Cellulosome gene cluster analysis for gauging the diversity of the ruminal cellulolytic bacterium Ruminococcus flavefaciens. , 2008, FEMS microbiology letters.
[34] Edward A Bayer,et al. The Clostridium cellulolyticum Dockerin Displays a Dual Binding Mode for Its Cohesin Partner* , 2008, Journal of Biological Chemistry.
[35] E. Bayer,et al. Cohesin‐dockerin microarray: Diverse specificities between two complementary families of interacting protein modules , 2008, Proteomics.
[36] M. Himmel,et al. The potential of cellulases and cellulosomes for cellulosic waste management. , 2007, Current opinion in biotechnology.
[37] Edward A Bayer,et al. Evidence for a dual binding mode of dockerin modules to cohesins , 2007, Proceedings of the National Academy of Sciences.
[38] Raphael Lamed,et al. Conservation and Divergence in Cellulosome Architecture between Two Strains of Ruminococcus flavefaciens , 2006, Journal of bacteriology.
[39] K. Sakka,et al. Binding of S-layer homology modules from Clostridium thermocellum SdbA to peptidoglycans , 2006, Applied Microbiology and Biotechnology.
[40] Michael J. Shulman,et al. Novel architecture of family-9 glycoside hydrolases identified in cellulosomal enzymes of Acetivibrio cellulolyticus and Clostridium thermocellum. , 2006, FEMS microbiology letters.
[41] E. Bayer,et al. Matching fusion protein systems for affinity analysis of two interacting families of proteins: the cohesin–dockerin interaction , 2005, Journal of molecular recognition : JMR.
[42] B. Webb,et al. Structural characterization of type II dockerin module from the cellulosome of Clostridium thermocellum: calcium-induced effects on conformation and target recognition. , 2005, Biochemistry.
[43] E. Bayer,et al. Cellulosome-like entities inBacteroides cellulosolvens , 2005, Current Microbiology.
[44] M. Elliott,et al. Expression, purification and structural characterization of the scaffoldin hydrophilic X-module from the cellulosome of Clostridium thermocellum. , 2004, Protein expression and purification.
[45] E. Bayer,et al. The cellulosomes: multienzyme machines for degradation of plant cell wall polysaccharides. , 2004, Annual review of microbiology.
[46] Raphael Lamed,et al. Architecture of the Bacteroides cellulosolvens Cellulosome: Description of a Cell Surface-Anchoring Scaffoldin and a Family 48 Cellulase , 2004, Journal of bacteriology.
[47] Raphael Lamed,et al. The Cellulosome System of Acetivibrio cellulolyticus Includes a Novel Type of Adaptor Protein and a Cell Surface Anchoring Protein , 2003, Journal of bacteriology.
[48] M. Himmel,et al. The bacterial scaffoldin: structure, function and potential applications in the nanosciences. , 2003, Genetic engineering.
[49] Raphael Lamed,et al. Cohesin-Dockerin Interaction in Cellulosome Assembly , 2001, The Journal of Biological Chemistry.
[50] Raphael Lamed,et al. Cellulosomal Scaffoldin-Like Proteins fromRuminococcus flavefaciens , 2001, Journal of bacteriology.
[51] Raphael Lamed,et al. A Scaffoldin of the Bacteroides cellulosolvens Cellulosome That Contains 11 Type II Cohesins , 2000, Journal of bacteriology.
[52] E. Bayer,et al. Cohesin‐dockerin recognition in cellulosome assembly: Experiment versus hypothesis , 2000, Proteins.
[53] Raphael Lamed,et al. A Novel Cellulosomal Scaffoldin fromAcetivibrio cellulolyticus That Contains a Family 9 Glycosyl Hydrolase , 1999, Journal of bacteriology.
[54] E. Bayer,et al. Cellulosomes-structure and ultrastructure. , 1998, Journal of structural biology.
[55] Tetsuya Kimura,et al. Cloning and DNA Sequencing of the Genes EncodingClostridium josui Scaffolding Protein CipA and Cellulase CelD and Identification of Their Gene Products as Major Components of the Cellulosome , 1998, Journal of bacteriology.
[56] E. Bayer,et al. Species‐specificity of the cohesin‐dockerin interaction between Clostridium thermocellum and Clostridium cellulolyticum: Prediction of specificity determinants of the dockerin domain , 1997, Proteins.
[57] C. Tardif,et al. Role of scaffolding protein CipC of Clostridium cellulolyticum in cellulose degradation , 1997, Journal of bacteriology.
[58] E. Bayer,et al. A cohesin domain from Clostridium thermocellum: the crystal structure provides new insights into cellulosome assembly. , 1997, Structure.
[59] P Béguin,et al. A new type of cohesin domain that specifically binds the dockerin domain of the Clostridium thermocellum cellulosome-integrating protein CipA , 1996, Journal of bacteriology.
[60] M. Wilchek,et al. Expression, purification, and characterization of the cellulose-binding domain of the scaffoldin subunit from the cellulosome of Clostridium thermocellum , 1995, Applied and environmental microbiology.
[61] P. Gounon,et al. OlpB, a new outer layer protein of Clostridium thermocellum, and binding of its S-layer-like domains to components of the cell envelope , 1995, Journal of bacteriology.
[62] D. Stahl,et al. Acetivibrio cellulolyticus and Bacteroides cellulosolvens are members of the greater clostridial assemblage. , 1994, FEMS microbiology letters.
[63] E. Bayer,et al. The cellulosome--a treasure-trove for biotechnology. , 1994, Trends in biotechnology.
[64] J. Aubert,et al. Recognition specificity of the duplicated segments present in Clostridium thermocellum endoglucanase CelD and in the cellulosome-integrating protein CipA , 1994, Journal of bacteriology.
[65] W Baumeister,et al. Domain structure of the Acetogenium kivui surface layer revealed by electron crystallography and sequence analysis , 1994, Journal of bacteriology.
[66] J. Aubert,et al. Organization of a Clostridium thermocellum gene cluster encoding the cellulosomal scaffolding protein CipA and a protein possibly involved in attachment of the cellulosome to the cell surface , 1993, Journal of bacteriology.
[67] A. Demain,et al. Sequencing of a Clostridium thermocellum gene (cipA) encoding the cellulosomal SL‐protein reveals an unusual degree of internal homology , 1993, Molecular microbiology.
[68] A. Demain,et al. Two components of an extracellular protein aggregate of Clostridium thermocellum together degrade crystalline cellulose , 1988 .
[69] W. D. Murray. Increased cellulose hydrolysis by Bacteroides cellulosolvens in a simplified synthetic medium , 1985 .
[70] A. Khan,et al. Conversion of cellulose to sugars by resting cells of a mesophilic anaerobe, Bacteriodes cellulosolvens , 1985, Biotechnology and bioengineering.
[71] A. Khan,et al. Cellulase and Sugar Formation by Bacteroides cellulosolvens, a Newly Isolated Cellulolytic Anaerobe , 1984, Applied and environmental microbiology.
[72] W. D. Murray,et al. Bacteroides cellulosolvens sp. nov., a Cellulolytic Species from Sewage Sludge† , 1984 .
[73] E Setter,et al. Characterization of a cellulose-binding, cellulase-containing complex in Clostridium thermocellum , 1983, Journal of bacteriology.