Genomic and phenotypic biology of a novel Dickeya zeae WH1 isolated from rice in China: Insights into pathogenicity and virulence factors
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W. Wang | Jing Xiao | Xu Wang | Xuan Gao | Liang Shen | Xiao-Juan Tan | G. Zhu | Feng He | Zhi-Wei Zhang | Yang Sun | Bin Jiang
[1] Bin Huang,et al. The Small RNA AmiL Regulates Quorum Sensing-Mediated Virulence in Pseudomonas aeruginosa PAO1 , 2022, Microbiology spectrum.
[2] John S. Hu,et al. Genomic Comparisons and Phenotypic Diversity of Dickeya zeae Strains Causing Bacterial Soft Rot of Banana in China , 2022, Frontiers in Plant Science.
[3] Lian-Hui Zhang,et al. Dickeya Manipulates Multiple Quorum Sensing Systems to Control Virulence and Collective Behaviors , 2022, Frontiers in Plant Science.
[4] M. Parsek,et al. Genomic and Functional Dissections of Dickeya zeae Shed Light on the Role of Type III Secretion System and Cell Wall-Degrading Enzymes to Host Range and Virulence , 2022, Microbiology spectrum.
[5] A. Jia,et al. Transcriptional analysis and target genes discovery of Pseudomonas aeruginosa biofilm developed ex vivo chronic wound model , 2021, AMB Express.
[6] Lian-Hui Zhang,et al. OhrR is a central transcriptional regulator of virulence in Dickeya zeae , 2021, Molecular plant pathology.
[7] S. Piazza,et al. The rice foot rot pathogen Dickeya zeae alters the in‐field plant microbiome , 2021, Environmental microbiology.
[8] Wenping Zhang,et al. Exploration of the Quorum-Quenching Mechanism in Pseudomonas nitroreducens W-7 and Its Potential to Attenuate the Virulence of Dickeya zeae EC1 , 2021, Frontiers in Microbiology.
[9] John S. Hu,et al. Genomic and Phenotypic Biology of Novel Strains of Dickeya zeae Isolated From Pineapple and Taro in Hawaii: Insights Into Genome Plasticity, Pathogenicity, and Virulence Determinants , 2021, bioRxiv.
[10] J. Wolf,et al. Soft Rot Pectobacteriaceae: A Brief Overview , 2021 .
[11] Steven B. Johnson,et al. Pectobacterium and Dickeya: Environment to Disease Development , 2021 .
[12] Plant Diseases Caused by Dickeya and Pectobacterium Species , 2021 .
[13] John S. Hu,et al. Genomic divergence between Dickeya zeae strain EC2 isolated from rice and previously identified strains, suggests a different rice foot rot strain , 2020, PloS one.
[14] M. Welch,et al. Quorum Sensing in Pseudomonas aeruginosa , 2020 .
[15] Guangtao Lu,et al. Screening, Identification and Efficacy Evaluation of Antagonistic Bacteria for Biocontrol of Soft Rot Disease Caused by Dickeya zeae , 2020, Microorganisms.
[16] Rick L. Stevens,et al. The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities , 2019, Nucleic Acids Res..
[17] A. Schaefer,et al. Virulence Factor Identification in the Banana Pathogen Dickeya zeae MS2 , 2019, Applied and Environmental Microbiology.
[18] C. Brochier-Armanet,et al. The phytopathogenic nature of Dickeya aquatica 174/2 and the dynamic early evolution of Dickeya pathogenicity. , 2019, Environmental microbiology.
[19] Lei Shi,et al. Dickeya zeae strains isolated from rice, banana and clivia rot plants show great virulence differentials , 2018, BMC Microbiology.
[20] Jingfa Xiao,et al. PGAweb: A Web Server for Bacterial Pan-Genome Analysis , 2018, Front. Microbiol..
[21] E. Lojkowska,et al. Interplay of classic Exp and specific Vfm quorum sensing systems on the phenotypic features of Dickeya solani strains exhibiting different virulence levels. , 2018, Molecular plant pathology.
[22] Minghui Li,et al. Anti-Biofilm and Antivirulence Activities of Metabolites from Plectosphaerella cucumerina against Pseudomonas aeruginosa , 2017, Front. Microbiol..
[23] Yao Wang,et al. A Pseudomonas T6SS effector recruits PQS-containing outer membrane vesicles for iron acquisition , 2017, Nature Communications.
[24] Ryan R. Wick,et al. Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads , 2016, bioRxiv.
[25] Lian-zhu Zhang,et al. Genetic Modulation of c-di-GMP Turnover Affects Multiple Virulence Traits and Bacterial Virulence in Rice Pathogen Dickeya zeae , 2016, PloS one.
[26] Y. Kraepiel,et al. Gram-negative phytopathogenic bacteria, all hemibiotrophs after all? , 2016, Molecular plant pathology.
[27] Jörg Peplies,et al. JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison , 2015, Bioinform..
[28] W. Nasser,et al. Virulence Program of a Bacterial Plant Pathogen: The Dickeya Model. , 2016, Progress in molecular biology and translational science.
[29] Y. Xiong,et al. The complete genome sequence of Dickeya zeae EC1 reveals substantial divergence from other Dickeya strains and species , 2015, BMC Genomics.
[30] Yong Wu,et al. Composition, function, and regulation of T6SS in Pseudomonas aeruginosa. , 2015, Microbiological research.
[31] Lian-Hui Zhang,et al. Production of Novel Antibiotics Zeamines through Optimizing Dickeya zeae Fermentation Conditions , 2014, PloS one.
[32] Torsten Seemann,et al. Prokka: rapid prokaryotic genome annotation , 2014, Bioinform..
[33] John S. Hu,et al. Identification of Dickeya zeae as a Causal Agent of Bacterial Soft Rot in Banana in China. , 2014, Plant disease.
[34] W. Nasser,et al. Dickeya ecology, environment sensing and regulation of virulence programme. , 2013, Environmental microbiology reports.
[35] E. T. Palva,et al. Pathogenicity of and plant immunity to soft rot pectobacteria , 2013, Front. Plant Sci..
[36] G. Salmond,et al. Top 10 plant pathogenic bacteria in molecular plant pathology. , 2012, Molecular plant pathology.
[37] M. Nei,et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. , 2011, Molecular biology and evolution.
[38] T. D. de Kievit. Quorum sensing in Pseudomonas aeruginosa biofilms. , 2009, Environmental microbiology.
[39] D. K. Willis,et al. The flagellar sigma factor fliA is required for Dickeya dadantii virulence. , 2008, Molecular plant-microbe interactions : MPMI.
[40] Lian-Hui Zhang,et al. The Acyl-Homoserine Lactone-Type Quorum-Sensing System Modulates Cell Motility and Virulence of Erwinia chrysanthemi pv. zeae , 2007, Journal of bacteriology.
[41] Peter F. Hallin,et al. RNAmmer: consistent and rapid annotation of ribosomal RNA genes , 2007, Nucleic acids research.
[42] P. Vandamme,et al. DNA-DNA hybridization values and their relationship to whole-genome sequence similarities. , 2007, International journal of systematic and evolutionary microbiology.
[43] D. Kadouri,et al. Growing and Analyzing Static Biofilms , 2006, Current protocols in microbiology.
[44] M. Pérombelon. Potato blackleg: Epidemiology, host-pathogen interaction and control , 1992, Netherlands Journal of Plant Pathology.
[45] Dean Laslett,et al. ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences. , 2004, Nucleic acids research.
[46] Susumu Goto,et al. The KEGG resource for deciphering the genome , 2004, Nucleic Acids Res..
[47] Cathy H. Wu,et al. UniProt: the Universal Protein knowledgebase , 2004, Nucleic Acids Res..
[48] S. D. De Boer. Relative Incidence of Erwinia carotovora subsp. atroseptica in Stolon End and Peridermal Tissue of Potato Tubers in Canada. , 2002, Plant disease.
[49] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[50] Michael Y. Galperin,et al. The COG database: a tool for genome-scale analysis of protein functions and evolution , 2000, Nucleic Acids Res..
[51] Y. Liu,et al. Inactivation of rsmA leads to overproduction of extracellular pectinases, cellulases, and proteases in Erwinia carotovora subsp. carotovora in the absence of the starvation/cell density-sensing signal, N-(3-oxohexanoyl)-L-homoserine lactone , 1995, Applied and environmental microbiology.