Graph cut and image intensity-based splitting improves nuclei segmentation in high-content screening
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Pekka Ruusuvuori | Pauli Rämö | Olli Yli-Harja | Muhammad Farhan | Mario Emmenlauer | Christoph Dehio | P. Ruusuvuori | O. Yli-Harja | P. Rämö | C. Dehio | M. Emmenlauer | Muhammad Farhan
[1] Anne E Carpenter,et al. A call for bioimaging software usability , 2012, Nature Methods.
[2] D. Greig,et al. Exact Maximum A Posteriori Estimation for Binary Images , 1989 .
[3] Anne E Carpenter,et al. CellProfiler: image analysis software for identifying and quantifying cell phenotypes , 2006, Genome Biology.
[4] Gareth Funka-Lea,et al. Graph Cuts and Efficient N-D Image Segmentation , 2006, International Journal of Computer Vision.
[5] Carlos Ortiz-de-Solorzano,et al. A Two-Phase Segmentation of Cell Nuclei Using Fast Level Set-Like Algorithms , 2009, SCIA.
[6] Vladimir Kolmogorov,et al. An experimental comparison of min-cut/max- flow algorithms for energy minimization in vision , 2001, IEEE Transactions on Pattern Analysis and Machine Intelligence.
[7] P. Liberali,et al. Population context determines cell-to-cell variability in endocytosis and virus infection , 2009, Nature.
[8] Pauli Rämö,et al. CellClassifier: supervised learning of cellular phenotypes , 2009, Bioinform..
[9] Pekka Ruusuvuori,et al. Open Access Research Article Evaluation of Methods for Detection of Fluorescence Labeled Subcellular Objects in Microscope Images , 2022 .
[10] C Chen,et al. Constraint factor graph cut–based active contour method for automated cellular image segmentation in RNAi screening , 2008, Journal of microscopy.
[11] Carlos Ortiz-de-Solorzano,et al. Segmentation of Touching Cell Nuclei Using a Two-Stage Graph Cut Model , 2009, SCIA.
[12] Carolina Wählby,et al. Image Based Measurements of Single Cell mtDNA Mutation Load , 2007, SCIA.
[13] Wiro J. Niessen,et al. Advanced level-set based multiple-cell segmentation and tracking in time-lapse fluorescence microscopy images , 2008, 2008 5th IEEE International Symposium on Biomedical Imaging: From Nano to Macro.
[14] K. Rohr,et al. Single‐cell‐based image analysis of high‐throughput cell array screens for quantification of viral infection , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[15] Vladimir Kolmogorov,et al. Computing geodesics and minimal surfaces via graph cuts , 2003, Proceedings Ninth IEEE International Conference on Computer Vision.
[16] Joakim Lindblad,et al. Image analysis for automatic segmentation of cytoplasms and classification of Rac1 activation , 2004, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[17] C Wählby,et al. Combining intensity, edge and shape information for 2D and 3D segmentation of cell nuclei in tissue sections , 2004, Journal of microscopy.
[18] Chunming Li,et al. Distance Regularized Level Set Evolution and Its Application to Image Segmentation , 2010, IEEE Transactions on Image Processing.
[19] Xiaobo Zhou,et al. Automatic Segmentation of High-Throughput RNAi Fluorescent Cellular Images , 2008, IEEE Transactions on Information Technology in Biomedicine.
[20] Olli Yli-Harja,et al. A novel method for splitting clumps of convex objects incorporating image intensity and using rectangular window-based concavity point-pair search , 2013, Pattern Recognit..