Detection of Salmonella spp. in veterinary samples by combining selective enrichment and real-time PCR

Rapid screening for enteric bacterial pathogens in clinical environments is essential for biosecurity. Salmonella found in veterinary hospitals, particularly Salmonella enterica serovar Dublin, can pose unique challenges for culture and testing because of its poor growth. Multiple Salmonella serovars including Dublin are emerging threats to public health given increasing prevalence and antimicrobial resistance. We adapted an automated food testing method to veterinary samples and evaluated the performance of the method in a variety of matrices including environmental samples (n = 81), tissues (n = 52), feces (n = 148), and feed (n = 29). A commercial kit was chosen as the basis for this approach in view of extensive performance characterizations published by multiple independent organizations. A workflow was established for efficiently and accurately testing veterinary matrices and environmental samples by use of real-time PCR after selective enrichment in Rappaport–Vassiliadis soya (RVS) medium. Using this method, the detection limit for S. Dublin improved by 100-fold over subculture on selective agars (eosin–methylene blue, brilliant green, and xylose–lysine–deoxycholate). Overall, the procedure was effective in detecting Salmonella spp. and provided next-day results.

[1]  A. Ekiri,et al.  Diagnostic performance and application of a real-time PCR assay for the detection of Salmonella in fecal samples collected from hospitalized horses with or without signs of gastrointestinal tract disease. , 2016, Veterinary journal.

[2]  Tine Hald,et al.  World Health Organization Estimates of the Global and Regional Disease Burden of 22 Foodborne Bacterial, Protozoal, and Viral Diseases, 2010: A Data Synthesis , 2015, PLoS medicine.

[3]  J CummingsKevin,et al.  Salmonella enterica serovar Oranienburg outbreak in a veterinary medical teaching hospital with evidence of nosocomial and on-farm transmission. , 2014 .

[4]  Martin Wiedmann,et al.  Salmonella enterica serovar Oranienburg outbreak in a veterinary medical teaching hospital with evidence of nosocomial and on-farm transmission. , 2014, Vector borne and zoonotic diseases.

[5]  L. Nielsen,et al.  Use of real-time PCR on faecal samples for detection of sub-clinical Salmonella infection in cattle did not improve the detection sensitivity compared to conventional bacteriology. , 2013, Veterinary microbiology.

[6]  E. Strain,et al.  Comparison of six commercial DNA extraction kits for detection of Brucella neotomae in Mexican and Central American-style cheese and other milk products. , 2013, Food microbiology.

[7]  Liza Rosenbaum Nielsen,et al.  Review of pathogenesis and diagnostic methods of immediate relevance for epidemiology and control of Salmonella Dublin in cattle. , 2013, Veterinary microbiology.

[8]  C. Schrader,et al.  PCR inhibitors – occurrence, properties and removal , 2012, Journal of applied microbiology.

[9]  J. E. Olsen,et al.  A new real‐time PCR method for the identification of Salmonella Dublin , 2012, Journal of applied microbiology.

[10]  H. Ojamo,et al.  Enrichment cultivation in detection of food-borne Salmonella , 2012 .

[11]  P. Morley,et al.  Salmonella enterica shedding in hospitalized horses and associations with diarrhea occurrence among their stablemates and gastrointestinal-related illness or death following discharge. , 2012, Journal of the American Veterinary Medical Association.

[12]  G. Slater,et al.  Comparison of commercial DNA extraction kits for isolation and purification of bacterial and eukaryotic DNA from PAH-contaminated soils. , 2011, Canadian journal of microbiology.

[13]  M. Furtado,et al.  Evaluation of applied biosystems MicroSEQ real-time PCR system for detection of Salmonella spp. in food. , 2011, Journal of AOAC International.

[14]  E. Travis,et al.  Pathogen Quantitation in Complex Matrices: A Multi-Operator Comparison of DNA Extraction Methods with a Novel Assessment of PCR Inhibition , 2011, PloS one.

[15]  E. Hodžić,et al.  Use of quantitative real-time PCR for the detection of Salmonella spp. in fecal samples from horses at a veterinary teaching hospital. , 2010, Veterinary journal.

[16]  S. Rankin,et al.  Outbreak of salmonellosis caused by Salmonella enterica serovar Newport MDR-AmpC in a large animal veterinary teaching hospital. , 2010, Journal of veterinary internal medicine.

[17]  M. Tobin-D'Angelo,et al.  Salmonellosis outcomes differ substantially by serotype. , 2008, The Journal of infectious diseases.

[18]  S. Pillai,et al.  Cultural and Immunological Detection Methods for Salmonella spp. in Animal Feeds – A Review , 2006, Veterinary Research Communications.

[19]  J. Traub-Dargatz,et al.  Multidrug-resistant Salmonella and nosocomial infections. , 2004, The Veterinary clinics of North America. Equine practice.

[20]  J. Songer,et al.  Veterinary Microbiology: Bacterial and Fungal Agents of Animal Disease , 2004 .

[21]  N Toft,et al.  Evaluation of an indirect serum ELISA and a bacteriological faecal culture test for diagnosis of Salmonella serotype Dublin in cattle using latent class models , 2004, Journal of applied microbiology.

[22]  Tomoko Yamamoto [Genus Salmonella]. , 2003, Nihon rinsho. Japanese journal of clinical medicine.

[23]  Sang J. Shin,et al.  Salmonella enterica Serotype Dublin Infection: an Emerging Infectious Disease for the Northeastern United States , 1999, Journal of Clinical Microbiology.

[24]  K. Nagaraja,et al.  Microbial food borne pathogens. Salmonella. , 1998, The Veterinary clinics of North America. Food animal practice.

[25]  T. Besser,et al.  Salmonella Shedding in Racing Sled Dogs , 1997, Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc.

[26]  J. House,et al.  Enzyme-linked immunosorbent assay for serologic detection of Salmonella dublin carriers on a large dairy. , 1993, American journal of veterinary research.

[27]  J. Cullor,et al.  Persistent experimental Salmonella dublin intramammary infection in dairy cows. , 1991, Journal of veterinary internal medicine.

[28]  C. Wray,et al.  Salmonella dublin infection of calves: use of small doses to simulate natural infection on the farm , 1981, Journal of Hygiene.