Advanced Multi-scale Modelling of the Respiratory System

This chapter is concerned with computational modelling of the respiratory system against the background of acute lung diseases and mechanical ventilation. Conceptually, we divide the lung into two major subsystems, namely the conducting airways and the respiratory zone. Due to their respective complexity, both parts are out of range for a simulation resolving all relevant length scales. Therefore, we develop novel multi-scale approaches taking into account the unresolved parts appropriately. In the respiratory zone, an alveolar ensemble is modelled considering not only tissue behaviour but also the influence of the covering surfactant film. On the global scale, a homogenised parenchyma model is derived from experiments on living lung tissue. At certain hotspots, novel nested multi-scale procedures are utilised to simulate the dynamic behaviour of lung parenchyma as a whole while still resolving alveolar scales locally. In the tracheo-bronchial region, CT-based geometries are employed in fluid-structure interaction simulations. Physiological outflow boundary conditions are derived by considering the impedance of the unresolved parts of the lung in a fully coupled 3D-0D procedure. Finally, a novel coupling approach enables the connection of 3D parenchyma and airway models into one overall lung model for the first time.

[1]  W. Wall,et al.  Fixed-point fluid–structure interaction solvers with dynamic relaxation , 2008 .

[2]  Kenneth R. Lutchen,et al.  An Anatomically Based Hybrid Computational Model of the Human Lung and its Application to Low Frequency Oscillatory Mechanics , 2006, Annals of Biomedical Engineering.

[3]  P. Roughley,et al.  Effect of glycosaminoglycan degradation on lung tissue viscoelasticity. , 2001, American journal of physiology. Lung cellular and molecular physiology.

[4]  Fpt Frank Baaijens,et al.  An approach to micro-macro modeling of heterogeneous materials , 2001 .

[5]  Charles A. Taylor,et al.  Outflow boundary conditions for three-dimensional finite element modeling of blood flow and pressure in arteries , 2006 .

[6]  B Suki,et al.  Wave propagation, input impedance, and wall mechanics of the calf trachea from 16 to 1,600 Hz. , 1993, Journal of applied physiology.

[7]  Wolfgang A Wall,et al.  Structured Tree Impedance Outflow Boundary Conditions for 3D Lung Simulations , 2010, Journal of biomechanical engineering.

[8]  C. Miehe,et al.  Computational micro-to-macro transitions for discretized micro-structures of heterogeneous materials at finite strains based on the minimization of averaged incremental energy , 2003 .

[9]  A. Green,et al.  Modelling of peak-flow wall shear stress in major airways of the lung. , 2004, Journal of biomechanics.

[10]  R. Schroter,et al.  Viscoelastic behavior of a lung alveolar duct model. , 2000, Journal of biomechanical engineering.

[11]  B. Suki,et al.  Dynamic properties of lung parenchyma: mechanical contributions of fiber network and interstitial cells. , 1997, Journal of applied physiology.

[12]  Wolfgang A. Wall,et al.  An abstract nonlinear-solver point of view on strong partitioned fluid-structure interaction coupling algorithms , 2007 .

[13]  R D Kamm,et al.  Dynamic surface tension of surfactant TA: experiments and theory. , 1994, Journal of applied physiology.

[14]  Kenneth Levenberg A METHOD FOR THE SOLUTION OF CERTAIN NON – LINEAR PROBLEMS IN LEAST SQUARES , 1944 .

[15]  W. Wall,et al.  Truly monolithic algebraic multigrid for fluid–structure interaction , 2011 .

[16]  Michael M. Resch,et al.  High Performance Computing on Vector Systems 2007 , 2007 .

[17]  A. C. Young,et al.  Mechanial properties of alveolar walls. , 1968, Journal of applied physiology.

[18]  R C Schroter,et al.  A mathematical model for the morphology of the pulmonary acinus. , 1996, Journal of biomechanical engineering.

[19]  R. Hill Elastic properties of reinforced solids: some theoretical principles , 1963 .

[20]  Timon Rabczuk,et al.  Fluid–structure interaction in lower airways of CT‐based lung geometries , 2008 .

[21]  Eric A Hoffman,et al.  Characteristics of airflow in a CT-based ovine lung: a numerical study. , 2007, Journal of applied physiology.

[22]  Marco Stampanoni,et al.  Evidence and structural mechanism for late lung alveolarization. , 2008, American journal of physiology. Lung cellular and molecular physiology.

[23]  D. Stamenović,et al.  Biomechanics of the lung parenchyma: critical roles of collagen and mechanical forces. , 2005, Journal of applied physiology.

[24]  Timothy J. Pedley,et al.  Pulmonary Fluid Dynamics , 1977 .

[25]  W. Wall,et al.  Nanoparticle transport in a realistic model of the tracheobronchial region , 2010 .

[26]  S. Uhlig,et al.  Videomicroscopy of methacholine-induced contraction of individual airways in precision-cut lung slices. , 1996, The European respiratory journal.

[27]  Y Liu,et al.  Modeling the bifurcating flow in a human lung airway. , 2002, Journal of biomechanics.

[28]  R C Schroter,et al.  Relationships between alveolar size and fibre distribution in a mammalian lung alveolar duct model. , 1997, Journal of biomechanical engineering.

[29]  F. L. Matthews,et al.  Analysis of elastic and surface tension effects in the lung alveolus using finite element methods. , 1986, Journal of biomechanics.

[30]  Arnab Majumdar,et al.  Mechanical interactions between collagen and proteoglycans: implications for the stability of lung tissue. , 2005, Journal of applied physiology.

[31]  Jintai Chung,et al.  A Time Integration Algorithm for Structural Dynamics With Improved Numerical Dissipation: The Generalized-α Method , 1993 .

[32]  R. Skalak,et al.  A mathematical model of lung parenchyma. , 1980, Journal of biomechanical engineering.

[33]  Keishi Kubo,et al.  Acute lung injury review. , 2009, Internal medicine.

[34]  P. J. Hunter,et al.  Generation of an Anatomically Based Three-Dimensional Model of the Conducting Airways , 2000, Annals of Biomedical Engineering.

[35]  R D Kamm,et al.  Airway wall mechanics. , 1999, Annual review of biomedical engineering.

[36]  C. Kleinstreuer,et al.  Airflow structures and nano-particle deposition in a human upper airway model , 2004 .

[37]  M. Olufsen,et al.  Numerical Simulation and Experimental Validation of Blood Flow in Arteries with Structured-Tree Outflow Conditions , 2000, Annals of Biomedical Engineering.

[38]  M. Zamir,et al.  The Physics of Pulsatile Flow , 2000, Biological Physics Series.

[39]  J. Chaboche,et al.  FE2 multiscale approach for modelling the elastoviscoplastic behaviour of long fibre SiC/Ti composite materials , 2000 .

[40]  R. Ogden,et al.  A New Constitutive Framework for Arterial Wall Mechanics and a Comparative Study of Material Models , 2000 .

[41]  D E Olson,et al.  Models of the human bronchial tree. , 1971, Journal of applied physiology.

[42]  Y C Fung,et al.  A model of the lung structure and its validation. , 1988, Journal of applied physiology.

[43]  Jonathan J. Hu,et al.  A new smoothed aggregation multigrid method for anisotropic problems , 2007, Numer. Linear Algebra Appl..

[44]  Wolfgang A. Wall,et al.  Modeling the Mechanical Behavior of Lung Tissue at the Microlevel , 2009 .

[45]  F. L. Matthews,et al.  Finite element analysis of lung alveolus. , 1980, Journal of biomechanics.

[46]  D. Marquardt An Algorithm for Least-Squares Estimation of Nonlinear Parameters , 1963 .

[47]  N. Stergiopulos,et al.  Residual strain effects on the stress field in a thick wall finite element model of the human carotid bifurcation. , 1996, Journal of biomechanics.

[48]  G. Nieman,et al.  The Mechanism of Ventilator-induced Lung Injury: Role of Dynamic Alveolar Mechanics , 2005 .

[49]  Wolfgang A. Wall,et al.  A nested dynamic multi-scale approach for 3D problems accounting for micro-scale multi-physics , 2010 .

[50]  Wei Huang,et al.  Mechanical properties of human lung parenchyma. , 2006, Biomedical sciences instrumentation.

[51]  G. Oberdörster,et al.  Pulmonary effects of inhaled ultrafine particles , 2000, International archives of occupational and environmental health.

[52]  R C Schroter,et al.  A model of non-uniform lung parenchyma distortion. , 2006, Journal of biomechanics.

[53]  R Takaki,et al.  A three-dimensional model of the human pulmonary acinus. , 2000, Journal of applied physiology.

[54]  Peter M. Suter,et al.  Effect of mechanical ventilation on inflammatory mediators in patients with acute respiratory distress syndrome: a randomized controlled trial. , 1999, JAMA.

[55]  A Gefen,et al.  Analysis of mechanical stresses within the alveolar septa leading to pulmonary edema. , 2001, Technology and health care : official journal of the European Society for Engineering and Medicine.

[56]  M. Toshima,et al.  Three-dimensional architecture of elastin and collagen fiber networks in the human and rat lung. , 2004, Archives of histology and cytology.

[57]  Clark R. Dohrmann,et al.  A uniform nodal strain tetrahedron with isochoric stabilization , 2009 .

[58]  Wolfgang A. Wall,et al.  Coupling strategies for biomedical fluid–structure interaction problems , 2010 .

[59]  T. Speed,et al.  Alveolar lining layer is thin and continuous: low-temperature scanning electron microscopy of rat lung. , 1995, Journal of applied physiology.

[60]  C. Carvalho,et al.  Effect of a protective-ventilation strategy on mortality in the acute respiratory distress syndrome. , 1998, The New England journal of medicine.

[61]  W A Wall,et al.  Material model of lung parenchyma based on living precision-cut lung slice testing. , 2011, Journal of the mechanical behavior of biomedical materials.

[62]  Wolfgang A. Wall,et al.  Vector Extrapolation for Strong Coupling Fluid-Structure Interaction Solvers , 2009 .