Association dynamics and linear and nonlinear optical properties of an N-acetylaladanamide probe in a POPC membrane.
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Erik Lindahl | Jacob Kongsted | Zilvinas Rinkevicius | Hans Ågren | Rossen Apostolov | N Arul Murugan | H. Ågren | E. Lindahl | N. A. Murugan | J. Kongsted | Ž. Rinkevičius | R. Apostolov
[1] W. Webb,et al. Nonlinear magic: multiphoton microscopy in the biosciences , 2003, Nature Biotechnology.
[2] P. Mcneil,et al. Plasma membrane disruption: repair, prevention, adaptation. , 2003, Annual review of cell and developmental biology.
[3] M. Parrinello,et al. Crystal structure and pair potentials: A molecular-dynamics study , 1980 .
[4] Mark A. Ratner,et al. Design and construction of molecular assemblies with large second-order optical nonlinearities. Quantum chemical aspects , 1994 .
[5] J. Pittner,et al. Absorption and fluorescence of PRODAN in phospholipid bilayers: a combined quantum mechanics and classical molecular dynamics study. , 2011, The journal of physical chemistry. A.
[6] J. Tomasi,et al. How the environment controls absorption and fluorescence spectra of PRODAN: a quantum-mechanical study in homogeneous and heterogeneous media. , 2008, The journal of physical chemistry. B.
[7] Peter M. Kasson,et al. GROMACS 4.5: a high-throughput and highly parallel open source molecular simulation toolkit , 2013, Bioinform..
[8] H. Ågren,et al. Binding Mechanism and Magnetic Properties of a Multifunctional Spin Label for Targeted EPR Imaging of Amyloid Proteins: Insight from Atomistic Simulations and First-Principles Calculations. , 2012, Journal of chemical theory and computation.
[9] Ryan M Burke,et al. Two-Photon and Second Harmonic Microscopy in Clinical and Translational Cancer Research , 2012, Annals of Biomedical Engineering.
[10] Y. Jan,et al. Probing Protein Electrostatics with a Synthetic Fluorescent Amino Acid , 2002, Science.
[11] W. Denk,et al. Two-photon laser scanning fluorescence microscopy. , 1990, Science.
[12] K. Ruud,et al. Large two-photon absorption cross section: molecular tweezer as a new promising class of compounds for nonlinear optics. , 2009, Physical chemistry chemical physics : PCCP.
[13] Jacob Kongsted,et al. Breakdown of the first hyperpolarizability/bond-length alternation parameter relationship , 2010, Proceedings of the National Academy of Sciences.
[14] Alessandro Marrone,et al. Photophysical properties of [Ru(phen)2(dppz)]2+ intercalated into DNA: an integrated Car-Parrinello and TDDFT study. , 2005, Journal of the American Chemical Society.
[15] D. Cramb,et al. Novel Fluorescence Spectral Deconvolution Method for Determination of Critical Micelle Concentrations Using the Fluorescence Probe PRODAN , 1999 .
[16] H. Ågren,et al. Hybrid density functional theory/molecular mechanics calculations of two-photon absorption of dimethylamino nitro stilbene in solution. , 2011, Physical chemistry chemical physics : PCCP.
[17] H. Levine,et al. Thioflavine T interaction with synthetic Alzheimer's disease β‐amyloid peptides: Detection of amyloid aggregation in solution , 1993, Protein science : a publication of the Protein Society.
[18] Mireille H. Blanchard-Desce,et al. Molecular probes for nonlinear optical imaging of biological membranes , 2001, SPIE Optics + Photonics.
[19] B. Nordén,et al. Spectral properties and orientation of voltage-sensitive dyes in lipid membranes. , 2012, Langmuir : the ACS journal of surfaces and colloids.
[20] B. Cho,et al. Two‐Photon Fluorescent Probes for Biomembrane Imaging: Effect of Chain Length , 2008, Chembiochem : a European journal of chemical biology.
[21] Jacob Kongsted,et al. Color modeling of protein optical probes. , 2012, Physical chemistry chemical physics : PCCP.
[22] J Mertz,et al. Membrane imaging by simultaneous second-harmonic generation and two-photon microscopy. , 2000, Optics letters.
[23] Junmei Wang,et al. Development and testing of a general amber force field , 2004, J. Comput. Chem..
[24] W. Webb,et al. Design of organic molecules with large two-photon absorption cross sections. , 1998, Science.
[25] B. Cohen,et al. Measurement of solvation responses at multiple sites in a globular protein. , 2007, The journal of physical chemistry. B.
[26] P. Chong. Effects of hydrostatic pressure on the location of PRODAN in lipid bilayers and cellular membranes. , 1988, Biochemistry.
[27] K. Gaus,et al. Visualizing membrane microdomains by Laurdan 2-photon microscopy (Review) , 2006, Molecular membrane biology.
[28] Jacob Kongsted,et al. Excited States in Solution through Polarizable Embedding , 2010 .
[29] H. Stassen,et al. Molecular dynamics investigations of PRODAN in a DLPC bilayer. , 2012, The journal of physical chemistry. B.
[30] C. Reichardt,et al. Solvatochromic Dyes as Solvent Polarity Indicators , 1994 .
[31] B. Tromberg,et al. Imaging cells and extracellular matrix in vivo by using second-harmonic generation and two-photon excited fluorescence , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[32] Benjamin Lindner,et al. Scaling of Multimillion-Atom Biological Molecular Dynamics Simulation on a Petascale Supercomputer. , 2009, Journal of chemical theory and computation.
[33] B. Champagne,et al. Effect of the dynamical disorder on the second-order nonlinear optical responses of helicity-encoded polymer strands. , 2009, The journal of physical chemistry. A.
[34] Jógvan Magnus Haugaard Olsen,et al. Amyloid Fibril-Induced Structural and Spectral Modifications in the Thioflavin-T Optical Probe. , 2013, The journal of physical chemistry letters.
[35] A. Alparone. The effect of secondary structures on the NLO properties of single chain oligopeptides: a comparison between β-strand and α-helix polyglycines. , 2013, Physical chemistry chemical physics : PCCP.
[36] M. Parrinello,et al. Canonical sampling through velocity rescaling. , 2007, The Journal of chemical physics.
[37] E Gratton,et al. Fluorescence generalized polarization of cell membranes: a two-photon scanning microscopy approach. , 1996, Biophysical journal.
[38] Trygve Helgaker,et al. Excitation energies in density functional theory: an evaluation and a diagnostic test. , 2008, The Journal of chemical physics.
[39] P. N. Day,et al. TDDFT study of one- and two-photon absorption properties: donor-pi-acceptor chromophores. , 2005, The journal of physical chemistry. B.
[40] B. Cho,et al. A Two‐Photon Fluorescent Probe for Lipid Raft Imaging: C‐Laurdan , 2007, Chembiochem : a European journal of chemical biology.
[41] O. Berger,et al. Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature. , 1997, Biophysical journal.
[42] F. Moyano,et al. New insights on the behavior of PRODAN in homogeneous media and in large unilamellar vesicles. , 2006, The journal of physical chemistry. B.
[43] Andrey S. Klymchenko,et al. Fluorene Analogues of Prodan with Superior Fluorescence Brightness and Solvatochromism , 2010 .
[44] T. Straatsma,et al. THE MISSING TERM IN EFFECTIVE PAIR POTENTIALS , 1987 .
[45] A. Waggoner,et al. Dye indicators of membrane potential. , 1979, Annual review of biophysics and bioengineering.
[46] C. Breneman,et al. Determining atom‐centered monopoles from molecular electrostatic potentials. The need for high sampling density in formamide conformational analysis , 1990 .