An evolutionary ancient mechanism for regulation of hemoglobin expression in vertebrate red cells.
暂无分享,去创建一个
L. Zon | F. Grosveld | Jan-Fang Cheng | S. Philipsen | D. Higgs | T. Sauka-Spengler | C. Fisher | R. Gibbons | N. Gillemans | Eskeatnaf Mulugeta | Dorit Hockman | J. Demmers | M. Miyata | M. Salminen | Jun Hou | Jared J. Ganis | S. Taylor
[1] S. Perrotta,et al. Intrabone hematopoietic stem cell gene therapy for adult and pediatric patients affected by transfusion-dependent ß-thalassemia , 2019, Nature Medicine.
[2] C. von Kalle,et al. Gene Therapy in Patients with Transfusion‐Dependent β‐Thalassemia , 2018, The New England journal of medicine.
[3] Martha L. Bulyk,et al. Direct Promoter Repression by BCL11A Controls the Fetal to Adult Hemoglobin Switch , 2018, Cell.
[4] C. Amemiya,et al. A genome-wide assessment of the ancestral neural crest gene regulatory network , 2018, Nature Communications.
[5] Laura J. Norton,et al. Natural regulatory mutations elevate the fetal globin gene via disruption of BCL11A or ZBTB7A binding , 2018, Nature Genetics.
[6] D. Gell. Structure and function of haemoglobins. , 2017, Blood cells, molecules & diseases.
[7] Xiaoping Liu,et al. Cytoglobin regulates blood pressure and vascular tone through nitric oxide metabolism in the vascular wall , 2017, Nature Communications.
[8] S. Koren,et al. Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation , 2016, bioRxiv.
[9] G. Veres,et al. Gene Therapy in a Patient with Sickle Cell Disease: Brief Report , 2017, The New England journal of medicine.
[10] L. Pennacchio,et al. Genetic dissection of the α-globin super-enhancer in vivo , 2016, Nature Genetics.
[11] Sudhir Kumar,et al. MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets. , 2016, Molecular biology and evolution.
[12] T. Burmester,et al. Convergent evolution of hemoglobin switching in jawed and jawless vertebrates , 2016, BMC Evolutionary Biology.
[13] Matthew C. Canver,et al. Transcription factors LRF and BCL11A independently repress expression of fetal hemoglobin , 2016, Science.
[14] David C. Norris,et al. Integrated genome browser: visual analytics platform for genomics , 2015, bioRxiv.
[15] N. Loman,et al. A complete bacterial genome assembled de novo using only nanopore sequencing data , 2015, Nature Methods.
[16] Howard Y. Chang,et al. ATAC‐seq: A Method for Assaying Chromatin Accessibility Genome‐Wide , 2015, Current protocols in molecular biology.
[17] T. Burmester,et al. The globin gene repertoire of lampreys: convergent evolution of hemoglobin and myoglobin in jawed and jawless vertebrates. , 2014, Molecular biology and evolution.
[18] R. Krumlauf,et al. A Hox regulatory network of hindbrain segmentation is conserved to the base of vertebrates , 2014, Nature.
[19] Aaron R. Quinlan,et al. Poretools: a toolkit for analyzing nanopore sequence data , 2014, bioRxiv.
[20] T. Sauka-Spengler,et al. A Reporter Assay in Lamprey Embryos Reveals Both Functional Conservation and Elaboration of Vertebrate Enhancers , 2014, PloS one.
[21] Alexander S. Garruss,et al. Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution , 2013, Nature Genetics.
[22] R. Hardison. Evolution of hemoglobin and its genes. , 2012, Cold Spring Harbor perspectives in medicine.
[23] R. Sandstrom,et al. Zebrafish globin switching occurs in two developmental stages and is controlled by the LCR. , 2012, Developmental biology.
[24] Steven L Salzberg,et al. Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.
[25] Ramón Doallo,et al. ProtTest 3: fast selection of best-fit models of protein evolution , 2011, Bioinform..
[26] S. Vinogradov,et al. The globin gene family of the cephalochordate amphioxus: implications for chordate globin evolution , 2010, BMC Evolutionary Biology.
[27] F. Grosveld,et al. Fetal globin expression is regulated by Friend of Prmt1. , 2010, Blood.
[28] A. Nederbragt,et al. Genomic organization and gene expression of the multiple globins in Atlantic cod: conservation of globin-flanking genes in chordates infers the origin of the vertebrate globin clusters , 2010, BMC Evolutionary Biology.
[29] T. Jue,et al. Myoglobin's old and new clothes: from molecular structure to function in living cells , 2010, Journal of Experimental Biology.
[30] F. Hoffmann,et al. Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates , 2010, Proceedings of the National Academy of Sciences.
[31] Gonçalo R. Abecasis,et al. The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..
[32] D. Higgs,et al. Long-range regulation of α globin gene expression during erythropoiesis , 2008, Current opinion in hematology.
[33] S. Hedges,et al. Molecular phylogeny and divergence times of deuterostome animals. , 2005, Molecular biology and evolution.
[34] S. Prabhakar,et al. Annotation of cis-regulatory elements by identification, subclassification, and functional assessment of multispecies conserved sequences. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[35] F. Grosveld,et al. Functional and comparative analysis of globin loci in pufferfish and humans. , 2003, Blood.
[36] Chuong B. Do,et al. Access the most recent version at doi: 10.1101/gr.926603 References , 2003 .
[37] Webb Miller,et al. PipMaker: A World Wide Web Server for Genomic Sequence Alignments , 2003, Current protocols in bioinformatics.
[38] K. Katoh,et al. Cyclostome Hemoglobins Are Possibly Paralogous to Gnathostome Hemoglobins , 2002, Journal of Molecular Evolution.
[39] T. Burmester,et al. Cytoglobin: a novel globin type ubiquitously expressed in vertebrate tissues. , 2002, Molecular biology and evolution.
[40] Webb Miller,et al. Comparative genome analysis delimits a chromosomal domain and identifies key regulatory elements in the α globin cluster , 2001 .
[41] J. Sambrook,et al. Molecular Cloning: A Laboratory Manual , 2001 .
[42] Lior Pachter,et al. VISTA : visualizing global DNA sequence alignments of arbitrary length , 2000, Bioinform..
[43] J. Stamler,et al. Ascaris haemoglobin is a nitric oxide-activated ‘deoxygenase’ , 1999, Nature.
[44] P. R. Gardner,et al. Nitric oxide dioxygenase: an enzymic function for flavohemoglobin. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[45] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[46] S. Karlin,et al. Prediction of complete gene structures in human genomic DNA. , 1997, Journal of molecular biology.
[47] R. Hardison,et al. A brief history of hemoglobins: plant, animal, protist, and bacteria. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[48] F. Grosveld,et al. A dominant chromatin‐opening activity in 5′ hypersensitive site 3 of the human beta‐globin locus control region. , 1996, The EMBO journal.
[49] G. Lanfranchi,et al. Ancestral hemoglobin switching in lampreys. , 1994, Developmental biology.
[50] G. Lanfranchi,et al. Different globin messenger RNAs are present before and after the metamorphosis in Lampetra zanandreai. , 1991, Developmental biology.
[51] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[52] R. Hardison,et al. Evolution of hemoglobin loci and their regulatory elements. , 2018, Blood cells, molecules & diseases.
[53] Luc Moens,et al. An evolutionary tree for invertebrate globin sequences , 2005, Journal of Molecular Evolution.
[54] K. Kawakami. Transgenesis and gene trap methods in zebrafish by using the Tol2 transposable element. , 2004, Methods in cell biology.