Transportin-SR2 Imports HIV into the Nucleus

BACKGROUND The human immunodeficiency virus type 1 (HIV-1) and other lentiviruses have the capacity to infect nondividing cells like macrophages. This requires import of the preintegration complex (PIC) through the nuclear pore. Although many cellular and viral determinants have been proposed, the mechanism leading to nuclear import is not yet understood. RESULTS Using yeast two-hybrid and pull-down, we identified and validated transportin-SR2 (TRN-SR2) as a bona fide binding partner of HIV-1 integrase. We confirmed the biological relevance of this interaction by RNAi. Depletion of TRN-SR2 interfered with the replication of HIV-1 and HIV-2 but not MoMLV in HeLaP4 cells. Knockdown of TRN-SR2 in primary macrophages likewise interfered with HIV-1 replication. Using Q-PCR, we pinpoint this block in replication to the early steps of the viral lifecycle. A reduction in 2-LTR formation suggests a block in PIC nuclear import upon siRNA-mediated knockdown. Different lines of evidence clearly proved that the late steps of viral replication are not affected. In an in vivo nuclear-import assay using labeled HIV-1 particles, the defect in nuclear import after depletion of TRN-SR2 was directly visualized. In comparison with control cell lines, the great majority of siRNA-treated cells did not contain any PIC in the nucleus. CONCLUSION Our data clearly demonstrate that TRN-SR2 is the nuclear-import factor of HIV.

[1]  A. Engelman,et al.  Identification of conserved amino acid residues critical for human immunodeficiency virus type 1 integrase function in vitro , 1992, Journal of virology.

[2]  Wulin Teo,et al.  An Essential Role for LEDGF/p75 in HIV Integration , 2006, Science.

[3]  M. Malim,et al.  Productive human immunodeficiency virus type 1 (HIV-1) infection of nonproliferating human monocytes , 1991, The Journal of experimental medicine.

[4]  Ian F. Harrison,et al.  Nuclear import of HIV‐1 intracellular reverse transcription complexes is mediated by importin 7 , 2003, The EMBO journal.

[5]  M. Llano,et al.  Lens Epithelium-derived Growth Factor/p75 Prevents Proteasomal Degradation of HIV-1 Integrase* , 2004, Journal of Biological Chemistry.

[6]  Youichi Suzuki,et al.  The road to chromatin — nuclear entry of retroviruses , 2007, Nature Reviews Microbiology.

[7]  M. Malim,et al.  A Sensitive, Quantitative Assay for Human Immunodeficiency Virus Type 1 Integration , 2002, Journal of Virology.

[8]  J. Lieberman,et al.  Identification of Host Proteins Required for HIV Infection Through a Functional Genomic Screen , 2007, Science.

[9]  Xiaojian Yao,et al.  Interaction of Human Immunodeficiency Virus Type 1 Integrase with Cellular Nuclear Import Receptor Importin 7 and Its Impact on Viral Replication* , 2007, Journal of Biological Chemistry.

[10]  A. Engelman,et al.  LEDGF/p75 functions downstream from preintegration complex formation to effect gene-specific HIV-1 integration. , 2007, Genes & development.

[11]  J. Lieberman,et al.  siRNA-directed inhibition of HIV-1 infection , 2002, Nature Medicine.

[12]  G. Natsoulis,et al.  Targeting foreign proteins to human immunodeficiency virus particles via fusion with Vpr and Vpx , 1995, Journal of virology.

[13]  Frederic D. Bushman,et al.  A quantitative assay for HIV DNA integration in vivo , 2001, Nature Medicine.

[14]  J. Darlix,et al.  Dual effect of the SR proteins ASF/SF2, SC35 and 9G8 on HIV-1 RNA splicing and virion production , 2005, Retrovirology.

[15]  T. Hope,et al.  HIV-1 infection of nondividing cells through the recognition of integrase by the importin/karyopherin pathway. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[16]  Myriam Witvrouw,et al.  Virus Evolution Reveals an Exclusive Role for LEDGF/p75 in Chromosomal Tethering of HIV , 2007, PLoS pathogens.

[17]  Pamela A. Silver,et al.  Identification of an Evolutionarily Conserved Domain in Human Lens Epithelium-derived Growth Factor/Transcriptional Co-activator p75 (LEDGF/p75) That Binds HIV-1 Integrase* , 2004, Journal of Biological Chemistry.

[18]  Pierre Legrain,et al.  Building protein-protein networks by two-hybrid mating strategy. , 2002, Methods in enzymology.

[19]  M. Stevenson,et al.  Modest but Reproducible Inhibition of Human Immunodeficiency Virus Type 1 Infection in Macrophages following LEDGFp75 Silencing , 2006, Journal of Virology.

[20]  D. DeFranco,et al.  Use of digitonin-permeabilized cells in studies of steroid receptor subnuclear trafficking. , 1999, Methods.

[21]  A. Graessmann,et al.  A synthetic peptide bearing the HIV-1 integrase 161-173 amino acid residues mediates active nuclear import and binding to importin alpha: characterization of a functional nuclear localization signal. , 2004, Journal of molecular biology.

[22]  P. Silver,et al.  HIV-1 Vpr interacts with the nuclear transport pathway to promote macrophage infection. , 1998, Genes & development.

[23]  Xiang-Dong Fu,et al.  Phosphorylation-dependent and -independent Nuclear Import of RS Domain-containing Splicing Factors and Regulators* , 2003, The Journal of Biological Chemistry.

[24]  Jelle Hendrix,et al.  Overexpression of the Lens Epithelium-Derived Growth Factor/p75 Integrase Binding Domain Inhibits Human Immunodeficiency Virus Replication , 2006, Journal of Virology.

[25]  J. Rain,et al.  von Hippel–Lindau binding protein 1-mediated degradation of integrase affects HIV-1 gene expression at a postintegration step , 2007, Proceedings of the National Academy of Sciences.

[26]  D. Jans,et al.  HIV-1 integrase is capable of targeting DNA to the nucleus via an Importin α/β-dependent mechanism , 2006 .

[27]  Myriam Witvrouw,et al.  Integrase Mutants Defective for Interaction with LEDGF/p75 Are Impaired in Chromosome Tethering and HIV-1 Replication* , 2005, Journal of Biological Chemistry.

[28]  R. Benarous,et al.  The Interaction of LEDGF/p75 with Integrase Is Lentivirus-specific and Promotes DNA Binding* , 2005, Journal of Biological Chemistry.

[29]  V. Baekelandt,et al.  Upscaling of lentiviral vector production by tangential flow filtration , 2005, The journal of gene medicine.

[30]  C. Van den Haute,et al.  Transient and Stable Knockdown of the Integrase Cofactor LEDGF/p75 Reveals Its Role in the Replication Cycle of Human Immunodeficiency Virus , 2006, Journal of Virology.

[31]  Wen Chang,et al.  A novel splicing regulator shares a nuclear import pathway with SR proteins , 2003, The EMBO journal.

[32]  Jennifer L. Bachorik,et al.  Transportin-SR, a Nuclear Import Receptor for SR Proteins , 1999, The Journal of cell biology.

[33]  M. Lai,et al.  A Human Importin-β Family Protein, Transportin-SR2, Interacts with the Phosphorylated RS Domain of SR Proteins* , 2000, The Journal of Biological Chemistry.

[34]  A. Cereseto,et al.  HIV-1 Pre-Integration Complexes Selectively Target Decondensed Chromatin in the Nuclear Periphery , 2008, PloS one.

[35]  J. Church Identification of Host Proteins Required for HIV Infection Through a Functional Genomic Screen , 2008, Pediatrics.

[36]  O H Jarrett Retroviruses. , 1987, Archives of disease in childhood.

[37]  L. Vrang,et al.  Preclinical Evaluation of 1H-Benzylindole Derivatives as Novel Human Immunodeficiency Virus Integrase Strand Transfer Inhibitors , 2008, Antimicrobial Agents and Chemotherapy.

[38]  Z. Debyser,et al.  Lentiviral nuclear import: a complex interplay between virus and host , 2007, BioEssays : news and reviews in molecular, cellular and developmental biology.

[39]  A. Engelman,et al.  Structural basis for the recognition between HIV-1 integrase and transcriptional coactivator p75. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[40]  M. Stevenson,et al.  Importin 7 May Be Dispensable for Human Immunodeficiency Virus Type 1 and Simian Immunodeficiency Virus Infection of Primary Macrophages , 2005, Journal of Virology.

[41]  Paul Shinn,et al.  A role for LEDGF/p75 in targeting HIV DNA integration , 2005, Nature Medicine.

[42]  M. Lai,et al.  Transportin-SR2 mediates nuclear import of phosphorylated SR proteins , 2001, Proceedings of the National Academy of Sciences of the United States of America.

[43]  Tyra G. Wolfsberg,et al.  Short interfering RNAs can induce unexpected and divergent changes in the levels of untargeted proteins in mammalian cells , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[44]  C. Depienne,et al.  Characterization of the Nuclear Import Pathway for HIV-1 Integrase* , 2001, The Journal of Biological Chemistry.

[45]  M. Emerman,et al.  Capsid Is a Dominant Determinant of Retrovirus Infectivity in Nondividing Cells , 2004, Journal of Virology.

[46]  M. Emerman,et al.  The Cell Cycle Independence of HIV Infections Is Not Determined by Known Karyophilic Viral Elements , 2005, PLoS pathogens.

[47]  Zeger Debyser,et al.  HIV-1 Integrase Forms Stable Tetramers and Associates with LEDGF/p75 Protein in Human Cells* , 2003, The Journal of Biological Chemistry.

[48]  E. De Clercq,et al.  LEDGF/p75 Is Essential for Nuclear and Chromosomal Targeting of HIV-1 Integrase in Human Cells* , 2003, Journal of Biological Chemistry.

[49]  M. Emerman,et al.  Human immunodeficiency virus infection of cells arrested in the cell cycle. , 1992, The EMBO journal.

[50]  Charles Flexner,et al.  HIV drug development: the next 25 years , 2007, Nature Reviews Drug Discovery.

[51]  D. Jans,et al.  HIV-1 integrase is capable of targeting DNA to the nucleus via an importin alpha/beta-dependent mechanism. , 2006, The Biochemical journal.

[52]  M. Caputi,et al.  A Bidirectional SF2/ASF- and SRp40-Dependent Splicing Enhancer Regulates Human Immunodeficiency Virus Type 1 rev, env, vpu, and nef Gene Expression , 2004, Journal of Virology.