Mutations in the mitochondrial ribosomal protein MRPS22 lead to primary ovarian insufficiency

Primary ovarian insufficiency (POI) is characterized by amenorrhea and loss or dysfunction of ovarian follicles prior to the age of 40. POI has been associated with autosomal recessive mutations in genes involving hormonal signaling and folliculogenesis, however, the genetic etiology of POI most often remains unknown. Here we report MRPS22 homozygous missense variants c.404G>A (p.R135Q) and c.605G>A (p.R202H) identified in four females from two independent consanguineous families as a novel genetic cause of POI in adolescents. Both missense mutations identified in MRPS22 are rare, occurred in highly evolutionarily conserved residues, and are predicted to be deleterious to protein function. In contrast to prior reports of mutations in MRPS22 associated with severe mitochondrial disease, the POI phenotype is far less severe. Consistent with this genotype-phenotype correlation, mitochondrial defects in oxidative phosphorylation or rRNA levels were not detected in fibroblasts derived from the POI patients, suggesting a non-bioenergetic or tissue-specific mitochondrial defect. Furthermore, we demonstrate in a Drosophila model that mRpS22 deficiency specifically in somatic cells of the ovary had no effect on fertility, whereas flies with mRpS22 deficiency specifically in germ cells were infertile and agametic, demonstrating a cell autonomous requirement for mRpS22 in germ cell development. These findings collectively identify that MRPS22, a component of the small mitochondrial ribosome subunit, is critical for ovarian development and may therefore provide insight into the pathophysiology and treatment of ovarian dysfunction.

[1]  Hüseyin Demirci,et al.  A patient with mitochondrial disorder due to a novel mutation in MRPS22 , 2017, Metabolic Brain Disease.

[2]  Y. Matsui,et al.  Distinct requirements for energy metabolism in mouse primordial germ cells and their reprogramming to embryonic germ cells , 2017, Proceedings of the National Academy of Sciences.

[3]  L. Persani,et al.  Genetics of primary ovarian insufficiency , 2017, Clinical genetics.

[4]  D. Bridges,et al.  Zinc finger protein 407 overexpression upregulates PPAR target gene expression and improves glucose homeostasis in mice. , 2016, American journal of physiology. Endocrinology and metabolism.

[5]  V. Desquiret-Dumas,et al.  Ovarian ageing: the role of mitochondria in oocytes and follicles. , 2016, Human reproduction update.

[6]  Anason S. Halees,et al.  Characterization of Greater Middle Eastern genetic variation for enhanced disease gene discovery , 2016, Nature Genetics.

[7]  N. Ban,et al.  Structure and Function of the Mitochondrial Ribosome. , 2016, Annual review of biochemistry.

[8]  H. Baris,et al.  Is one diagnosis the whole story? patients with double diagnoses , 2016, American journal of medical genetics. Part A.

[9]  R. Veitia,et al.  A non‐sense MCM9 mutation in a familial case of primary ovarian insufficiency , 2016, Clinical genetics.

[10]  James Y. Zou Analysis of protein-coding genetic variation in 60,706 humans , 2015, Nature.

[11]  E. Levy-Lahad,et al.  A mutation in the nucleoporin-107 gene causes XX gonadal dysgenesis. , 2015, The Journal of clinical investigation.

[12]  D. Valle,et al.  GeneMatcher: A Matching Tool for Connecting Investigators with an Interest in the Same Gene , 2015, Human mutation.

[13]  Yanhui Hu,et al.  The Transgenic RNAi Project at Harvard Medical School: Resources and Validation , 2015, Genetics.

[14]  Ruedi Aebersold,et al.  The complete structure of the 55S mammalian mitochondrial ribosome , 2015, Science.

[15]  Alan Brown,et al.  The structure of the human mitochondrial ribosome , 2015, Science.

[16]  T. Walsh,et al.  Homozygous loss-of-function mutations in SOHLH1 in patients with nonsyndromic hypergonadotropic hypogonadism. , 2015, The Journal of clinical endocrinology and metabolism.

[17]  H. Salz,et al.  Maintenance of Drosophila germline stem cell sexual identity in oogenesis and tumorigenesis , 2015, Development.

[18]  T. Meitinger,et al.  MRPS22 mutation causes fatal neonatal lactic acidosis with brain and heart abnormalities , 2015, neurogenetics.

[19]  Joseph T. Glessner,et al.  Mutation in mitochondrial ribosomal protein S7 (MRPS7) causes congenital sensorineural deafness, progressive hepatic and renal failure and lactic acidemia. , 2015, Human molecular genetics.

[20]  U. Surti,et al.  Exome sequencing reveals MCM8 mutation underlies ovarian failure and chromosomal instability. , 2015, Journal of Clinical Investigation.

[21]  U. Surti,et al.  MCM9 mutations are associated with ovarian failure, short stature, and chromosomal instability. , 2014, American journal of human genetics.

[22]  A. Vanderver,et al.  Novel (ovario) leukodystrophy related to AARS2 mutations , 2014, Neurology.

[23]  Bai-Lin Wu,et al.  Mutations in HFM1 in recessive primary ovarian insufficiency. , 2014, The New England journal of medicine.

[24]  R. Veitia,et al.  Mutant cohesin in premature ovarian failure. , 2014, The New England journal of medicine.

[25]  R. Gibbs,et al.  Launching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline , 2014, BMC Bioinformatics.

[26]  M. Daly,et al.  Mutations in eIF4ENIF1 are associated with primary ovarian insufficiency. , 2013, The Journal of clinical endocrinology and metabolism.

[27]  J. Lupski,et al.  Exome sequencing resolves apparent incidental findings and reveals further complexity of SH3TC2 variant alleles causing Charcot-Marie-Tooth neuropathy , 2013, Genome Medicine.

[28]  C. Hoppel,et al.  Measuring oxidative phosphorylation in human skin fibroblasts. , 2013, Analytical biochemistry.

[29]  T. Walsh,et al.  Mutations in LARS2, encoding mitochondrial leucyl-tRNA synthetase, lead to premature ovarian failure and hearing loss in Perrault syndrome. , 2013, American journal of human genetics.

[30]  M. Dresser,et al.  Mouse HFM1/Mer3 Is Required for Crossover Formation and Complete Synapsis of Homologous Chromosomes during Meiosis , 2013, PLoS genetics.

[31]  I. Adzhubei,et al.  Predicting Functional Effect of Human Missense Mutations Using PolyPhen‐2 , 2013, Current protocols in human genetics.

[32]  Aleksandar Milosavljevic,et al.  An integrative variant analysis suite for whole exome next-generation sequencing data , 2012, BMC Bioinformatics.

[33]  P. Touraine,et al.  Novel NOBOX loss‐of‐function mutations account for 6.2% of cases in a large primary ovarian insufficiency cohort , 2011, Human mutation.

[34]  Norbert Perrimon,et al.  A genome-scale shRNA resource for transgenic RNAi in Drosophila , 2011, Nature Methods.

[35]  T. Walsh,et al.  Mutations in mitochondrial histidyl tRNA synthetase HARS2 cause ovarian dysgenesis and sensorineural hearing loss of Perrault syndrome , 2011, Proceedings of the National Academy of Sciences.

[36]  Saskia B Wortmann,et al.  Mutation in mitochondrial ribosomal protein MRPS22 leads to Cornelia de Lange-like phenotype, brain abnormalities and hypertrophic cardiomyopathy , 2011, European Journal of Human Genetics.

[37]  R. Gibbs,et al.  Targeted enrichment beyond the consensus coding DNA sequence exome reveals exons with higher variant densities , 2011, Genome Biology.

[38]  M. DePristo,et al.  The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. , 2010, Genome research.

[39]  H. Hakonarson,et al.  ANNOVAR: functional annotation of genetic variants from high-throughput sequencing data , 2010, Nucleic acids research.

[40]  Richard Durbin,et al.  Sequence analysis Fast and accurate short read alignment with Burrows – Wheeler transform , 2009 .

[41]  R. Benavente,et al.  Correction: Mutation of the Mouse Syce1 Gene Disrupts Synapsis and Suggests a Link between Synaptonemal Complex Structural Components and DNA Repair , 2009, PLoS Genetics.

[42]  A. Rajkovic,et al.  Transcription factor FIGLA is mutated in patients with premature ovarian failure. , 2008, American journal of human genetics.

[43]  Ann Saada,et al.  Antenatal mitochondrial disease caused by mitochondrial ribosomal protein (MRPS22) mutation , 2007, Journal of Medical Genetics.

[44]  A. Rajkovic,et al.  NOBOX homeobox mutation causes premature ovarian failure. , 2007, American journal of human genetics.

[45]  Martijn A. Huynen,et al.  Reconstructing the evolution of the mitochondrial ribosomal proteome , 2007, Nucleic acids research.

[46]  C. Semple,et al.  Two novel proteins recruited by synaptonemal complex protein 1 (SYCP1) are at the centre of meiosis , 2005, Journal of Cell Science.

[47]  Steven Henikoff,et al.  SIFT: predicting amino acid changes that affect protein function , 2003, Nucleic Acids Res..

[48]  R. Schiffmann,et al.  Ovarian failure related to eukaryotic initiation factor 2B mutations. , 2003, American journal of human genetics.

[49]  F. Laski,et al.  Expression pattern of Gal4 enhancer trap insertions into the bric à brac locus generated by P element replacement , 2002, Genesis.

[50]  Liqun Luo,et al.  Mosaic Analysis with a Repressible Cell Marker for Studies of Gene Function in Neuronal Morphogenesis , 1999, Neuron.

[51]  D. Russell,et al.  17Beta-hydroxysteroid dehydrogenase 3 deficiency in women. , 1999, The Journal of clinical endocrinology and metabolism.

[52]  R. Lehmann,et al.  Regulation of zygotic gene expression in Drosophila primordial germ cells , 1998, Current Biology.

[53]  D. Abeliovich,et al.  A (R80Q) mutation in 17 beta-hydroxysteroid dehydrogenase type 3 gene among Arabs of Israel is associated with pseudohermaphroditism in males and normal asymptomatic females. , 1996, The Journal of clinical endocrinology and metabolism.

[54]  S. Krähenbühl,et al.  Development and evaluation of a spectrophotometric assay for complex III in isolated mitochondria, tissues and fibroblasts from rats and humans. , 1994, Clinica chimica acta; international journal of clinical chemistry.

[55]  K. O. Elliston,et al.  Male pseudohermaphroditism caused by mutations of testicular 17β–hydroxysteroid dehydrogenase 3 , 1994, Nature Genetics.

[56]  D. Kerr,et al.  Deficiency of the reduced nicotinamide adenine dinucleotide dehydrogenase component of complex I of mitochondrial electron transport. Fatal infantile lactic acidosis and hypermetabolism with skeletal-cardiac myopathy and encephalopathy. , 1987, The Journal of clinical investigation.