A structured approach to recording AIDS-defining illnesses in Kenya: A SNOMED CT based solution

INTRODUCTION Several studies conducted in sub-Saharan Africa (SSA) have shown that routine clinical data in HIV clinics often have errors. Lack of structured and coded documentation of diagnosis of AIDS defining illnesses (ADIs) can compromise data quality and decisions made on clinical care. METHODS We used a structured framework to derive a reference set of concepts and terms used to describe ADIs. The four sources used were: (i) CDC/Accenture list of opportunistic infections, (ii) SNOMED Clinical Terms (SNOMED CT), (iii) Focus Group Discussion (FGD) among clinicians and nurses attending to patients at a referral provincial hospital in western Kenya, and (iv) chart abstraction from the Maternal Child Health (MCH) and HIV clinics at the same hospital. Using the January 2014 release of SNOMED CT, concepts were retrieved that matched terms abstracted from approach iii & iv, and the content coverage assessed. Post-coordination matching was applied when needed. RESULTS The final reference set had 1054 unique ADI concepts which were described by 1860 unique terms. Content coverage of SNOMED CT was high (99.9% with pre-coordinated concepts; 100% with post-coordination). The resulting reference set for ADIs was implemented as the interface terminology on OpenMRS data entry forms. CONCLUSION Different sources demonstrate complementarity in the collection of concepts and terms for an interface terminology. SNOMED CT provides a high coverage in the domain of ADIs. Further work is needed to evaluate the effect of the interface terminology on data quality and quality of care.

[1]  M Egger,et al.  AIDS-related opportunistic illnesses occurring after initiation of potent antiretroviral therapy: the Swiss HIV Cohort Study. , 1999, JAMA.

[2]  Barbara Castelnuovo,et al.  Implementation of Provider-Based Electronic Medical Records and Improvement of the Quality of Data in a Large HIV Program in Sub-Saharan Africa , 2012, PloS one.

[3]  Anthony D Harries,et al.  Supervision, monitoring and evaluation of nationwide scale-up of antiretroviral therapy in Malawi. , 2006, Bulletin of the World Health Organization.

[4]  A. U. Rickel,et al.  Guidelines for Prevention, I , 1998 .

[5]  Ankur Gupta,et al.  Assessing the impact of prevalent tuberculosis on mortality among antiretroviral treatment initiators: accurate tuberculosis diagnosis is essential. , 2012, AIDS.

[6]  Nicolette de Keizer,et al.  Inconsistencies between Recorded Opportunistic Infections and WHO HIV Staging in Western Kenya , 2013, MedInfo.

[7]  John T Brooks,et al.  Guidelines for prevention and treatment of opportunistic infections in HIV-infected adults and adolescents: recommendations from CDC, the National Institutes of Health, and the HIV Medicine Association of the Infectious Diseases Society of America. , 2009, MMWR. Recommendations and reports : Morbidity and mortality weekly report. Recommendations and reports.

[8]  R Cornet,et al.  Construction of an Interface Terminology on SNOMED CT , 2010, Methods of Information in Medicine.

[9]  D. Hom,et al.  Impact of tuberculosis (TB) on HIV‐1 activity in dually infected patients , 2001, Clinical and experimental immunology.

[10]  J. Gallant,et al.  Antiretroviral therapy. , 2000, The Hopkins HIV report : a bimonthly newsletter for healthcare providers.

[11]  Carlos Martínez,et al.  The freetext matching algorithm: a computer program to extract diagnoses and causes of death from unstructured text in electronic health records , 2012, BMC Medical Informatics and Decision Making.

[12]  Anne Randorff Højen,et al.  Re-use of SNOMED CT subset in development of the Danish national standard for home care nursing problems , 2015, MIE.

[13]  Barbara Castelnuovo,et al.  Quality of data collection in a large HIV observational clinic database in sub-Saharan Africa: implications for clinical research and audit of care , 2011, Journal of the International AIDS Society.

[14]  Randolph A. Miller,et al.  Review Paper: Interface Terminologies: Facilitating Direct Entry of Clinical Data into Electronic Health Record Systems , 2006, J. Am. Medical Informatics Assoc..

[15]  S. Trent Rosenbloom,et al.  Research Paper: Using SNOMED CT to Represent Two Interface Terminologies , 2009, J. Am. Medical Informatics Assoc..

[16]  D Costagliola,et al.  Causes of the first AIDS‐defining illness and subsequent survival before and after the advent of combined antiretroviral therapy * , 2008, HIV Medicine.

[17]  Gundo Weiler,et al.  Global Update on HIV Treatment 2013: Results, Impact and Opportunities , 2013 .

[18]  Andrew Hayen,et al.  Integrating electronic health record information to support integrated care: Practical application of ontologies to improve the accuracy of diabetes disease registers , 2014, J. Biomed. Informatics.