Quantitative neuroanatomy for connectomics in Drosophila
暂无分享,去创建一个
Stephan Saalfeld | Stephan Gerhard | Albert Cardona | Mark Longair | Casey M. Schneider-Mizell | Richard D. Fetter | Frank M Midgley | Tom Kazimiers | Feng Li | Maarten Zwart | Andrew Champion
[1] T. Sato,et al. A modified method for lead staining of thin sections. , 1968, Journal of electron microscopy.
[2] M. Burrows,et al. A presynaptic gain control mechanism among sensory neurons of a locust leg proprioceptor , 1994, The Journal of neuroscience : the official journal of the Society for Neuroscience.
[3] Michael I. Jordan,et al. Distance Metric Learning with Application to Clustering with Side-Information , 2002, NIPS.
[4] T. Jegla,et al. Neuronal polarity: an evolutionary perspective , 2015, Journal of Experimental Biology.
[5] C. Koch,et al. Multiplicative computation in a visual neuron sensitive to looming , 2002, Nature.
[6] Srinivas C. Turaga,et al. Space-time wiring specificity supports direction selectivity in the retina , 2014, Nature.
[7] R. Kerr,et al. Discovery of Brainwide Neural-Behavioral Maps via Multiscale Unsupervised Structure Learning , 2014, Science.
[8] S. Sherman,et al. Synaptic circuits involving an individual retinogeniculate axon in the cat , 1987, The Journal of comparative neurology.
[9] Rob R. de Ruyter van Steveninck,et al. The metabolic cost of neural information , 1998, Nature Neuroscience.
[10] Matthew Cook,et al. Efficient automatic 3D-reconstruction of branching neurons from EM data , 2012, 2012 IEEE Conference on Computer Vision and Pattern Recognition.
[11] Kristin Branson,et al. A multilevel multimodal circuit enhances action selection in Drosophila , 2015, Nature.
[12] Stephan Saalfeld,et al. CATMAID: collaborative annotation toolkit for massive amounts of image data , 2009, Bioinform..
[13] Yuh Nung Jan,et al. Peripheral multidendritic sensory neurons are necessary for rhythmic locomotion behavior in Drosophila larvae , 2007, Proceedings of the National Academy of Sciences.
[14] John B. Thomas,et al. A sensory feedback circuit coordinates muscle activity in Drosophila , 2007, Molecular and Cellular Neuroscience.
[15] R. Douglas,et al. Stereotypical Bouton Clustering of Individual Neurons in Cat Primary Visual Cortex , 2007, The Journal of Neuroscience.
[16] Aljoscha Nern,et al. Optimized tools for multicolor stochastic labeling reveal diverse stereotyped cell arrangements in the fly visual system , 2015, Proceedings of the National Academy of Sciences.
[17] M. Bate,et al. The Origin, Location, and Projections of the Embryonic Abdominal Motorneurons of Drosophila , 1997, The Journal of Neuroscience.
[18] Bartlett W. Mel,et al. Computational subunits in thin dendrites of pyramidal cells , 2004, Nature Neuroscience.
[19] R. Schmidt,et al. Presynaptic inhibition in the vertebrate spinal cord revisited , 1999, Experimental Brain Research.
[20] Srinivas C. Turaga,et al. Machines that learn to segment images: a crucial technology for connectomics , 2010, Current Opinion in Neurobiology.
[21] M. Suster,et al. Embryonic assembly of a central pattern generator without sensory input , 2002, Nature.
[22] Julie H. Simpson,et al. A GAL4-driver line resource for Drosophila neurobiology. , 2012, Cell reports.
[23] Qian Cai,et al. Mitochondrial transport in neurons: impact on synaptic homeostasis and neurodegeneration , 2012, Nature Reviews Neuroscience.
[24] Louis K. Scheffer,et al. Minimizing Manual Image Segmentation Turn-Around Time for Neuronal Reconstruction by Embracing Uncertainty , 2012, PloS one.
[25] M. Deschenes,et al. Dendrodendritic and Axoaxonic Synapses in the Thalamic Reticular Nucleus of the Adult Rat , 1997, The Journal of Neuroscience.
[26] M. Burrows. Local circuits for the control of leg movements in an insect , 1992, Trends in Neurosciences.
[27] F. Clarac,et al. Invertebrate presynaptic inhibition and motor control , 1996, Experimental Brain Research.
[28] Matthias Landgraf,et al. Charting the Drosophila neuropile: a strategy for the standardised characterisation of genetically amenable neurites. , 2003, Developmental biology.
[29] Louis K. Scheffer,et al. Semi-automated reconstruction of neural circuits using electron microscopy , 2010, Current Opinion in Neurobiology.
[30] Nathan W. Gouwens,et al. Signal Propagation in Drosophila Central Neurons , 2009, The Journal of Neuroscience.
[31] J. Ule,et al. Protein–RNA interactions: new genomic technologies and perspectives , 2012, Nature Reviews Genetics.
[32] Anchi Cheng,et al. Automated molecular microscopy: the new Leginon system. , 2005, Journal of structural biology.
[33] Konrad Kording,et al. Automatic discovery of cell types and microcircuitry from neural connectomics , 2014, eLife.
[34] A. Light,et al. The ultrastructure of group Ia afferent fiber synapses in the lumbosacral spinal cord of the cat , 1984, Brain Research.
[35] Kevin L. Briggman,et al. Wiring specificity in the direction-selectivity circuit of the retina , 2011, Nature.
[36] Gaia Tavosanis,et al. Synaptic organization in the adult Drosophila mushroom body calyx , 2009, The Journal of comparative neurology.
[37] Cori Bargmann. Beyond the connectome: How neuromodulators shape neural circuits , 2012, BioEssays : news and reviews in molecular, cellular and developmental biology.
[38] Z. Mainen,et al. Early events in olfactory processing. , 2006, Annual review of neuroscience.
[39] G. Knott,et al. Supervoxel-Based Segmentation of EM Image Stacks with Learned Shape Features , 2010 .
[40] H. Seung,et al. Neuronal Cell Types and Connectivity: Lessons from the Retina , 2014, Neuron.
[41] Pascal Fua,et al. Learning Context Cues for Synapse Segmentation in EM Volumes , 2012, MICCAI.
[42] G. Laurent,et al. Role of GABAergic Inhibition in Shaping Odor-Evoked Spatiotemporal Patterns in the Drosophila Antennal Lobe , 2005, The Journal of Neuroscience.
[43] M. Helmstaedter. Cellular-resolution connectomics: challenges of dense neural circuit reconstruction , 2013, Nature Methods.
[44] Eric L. Miller,et al. Segmentation fusion for connectomics , 2011, 2011 International Conference on Computer Vision.
[45] Takako Morimoto,et al. A Group of Segmental Premotor Interneurons Regulates the Speed of Axial Locomotion in Drosophila Larvae , 2014, Current Biology.
[46] Matthias Landgraf,et al. Development of Connectivity in a Motoneuronal Network in Drosophila Larvae , 2015, Current Biology.
[47] Lav R. Varshney,et al. Structural Properties of the Caenorhabditis elegans Neuronal Network , 2009, PLoS Comput. Biol..
[48] Chung-Hui Yang,et al. Projections of Drosophila multidendritic neurons in the central nervous system: links with peripheral dendrite morphology , 2007, Development.
[49] Andreas Prokop,et al. Are dendrites in Drosophila homologous to vertebrate dendrites? , 2005, Developmental biology.
[50] Louis K. Scheffer,et al. A visual motion detection circuit suggested by Drosophila connectomics , 2013, Nature.
[51] Pascal Fua,et al. Supervoxel-Based Segmentation of Mitochondria in EM Image Stacks With Learned Shape Features , 2012, IEEE Transactions on Medical Imaging.
[52] Fred A. Hamprecht,et al. Automated Detection of Synapses in Serial Section Transmission Electron Microscopy Image Stacks , 2014, PloS one.
[53] Shawn R. Lockery,et al. Characterization of Drosophila Larval Crawling at the Level of Organism, Segment, and Somatic Body Wall Musculature , 2012, The Journal of Neuroscience.
[54] Johanna Beyer,et al. Design and Evaluation of Interactive Proofreading Tools for Connectomics , 2014, IEEE Transactions on Visualization and Computer Graphics.
[55] Moritz Helmstaedter,et al. High-accuracy neurite reconstruction for high-throughput neuroanatomy , 2011, Nature Neuroscience.
[56] I. Meinertzhagen,et al. Synaptic organization of columnar elements in the lamina of the wild type in Drosophila melanogaster , 1991, The Journal of comparative neurology.
[57] U. Brandes. A faster algorithm for betweenness centrality , 2001 .
[58] Shawn R. Olsen,et al. Lateral presynaptic inhibition mediates gain control in an olfactory circuit , 2008, Nature.
[59] Srinivas C. Turaga,et al. Connectomic reconstruction of the inner plexiform layer in the mouse retina , 2013, Nature.
[60] Liqun Luo,et al. Small GTPase Cdc42 Is Required for Multiple Aspects of Dendritic Morphogenesis , 2003, The Journal of Neuroscience.
[61] Matthias Landgraf,et al. Genetically encoded dendritic marker sheds light on neuronal connectivity in Drosophila , 2010, Proceedings of the National Academy of Sciences.
[62] Johannes E. Schindelin,et al. TrakEM2 Software for Neural Circuit Reconstruction , 2012, PloS one.
[63] Kevin L. Briggman,et al. Structural neurobiology: missing link to a mechanistic understanding of neural computation , 2012, Nature Reviews Neuroscience.
[64] Pascal Fua,et al. Learning Context Cues for Synapse Segmentation , 2013, IEEE Transactions on Medical Imaging.
[65] N. Randel,et al. Inter-individual stereotypy of the Platynereis larval visual connectome , 2015, eLife.
[66] A. Cardona,et al. Elastic volume reconstruction from series of ultra-thin microscopy sections , 2012, Nature Methods.
[67] Marta Zlatic,et al. Positional Cues in the Drosophila Nerve Cord: Semaphorins Pattern the Dorso-Ventral Axis , 2009, PLoS biology.
[68] Mark H Ellisman,et al. The Micro-Architecture of Mitochondria at Active Zones: Electron Tomography Reveals Novel Anchoring Scaffolds and Cristae Structured for High-Rate Metabolism , 2010, The Journal of Neuroscience.
[69] Ashok Veeraraghavan,et al. Increasing depth resolution of electron microscopy of neural circuits using sparse tomographic reconstruction , 2010, 2010 IEEE Computer Society Conference on Computer Vision and Pattern Recognition.
[70] R. Levine,et al. Role of intrinsic properties in Drosophila motoneuron recruitment during fictive crawling. , 2010, Journal of neurophysiology.
[71] William R. Gray Roncal,et al. Saturated Reconstruction of a Volume of Neocortex , 2015, Cell.
[72] Matthias Landgraf,et al. Genetic Specification of Axonal Arbors atonal Regulates robo3 to Position Terminal Branches in the Drosophila Nervous System , 2003, Neuron.
[73] Johannes E. Schindelin,et al. Identifying Neuronal Lineages of Drosophila by Sequence Analysis of Axon Tracts , 2010, The Journal of Neuroscience.
[74] Sen Song,et al. A genetic and computational approach to structurally classify neuronal types , 2014, Nature Communications.
[75] Luca Maria Gambardella,et al. Candidate Sampling for Neuron Reconstruction from Anisotropic Electron Microscopy Volumes , 2014, MICCAI.
[76] Tomoko Ohyama,et al. A Combinatorial Semaphorin Code Instructs the Initial Steps of Sensory Circuit Assembly in the Drosophila CNS , 2011, Neuron.
[77] Arthur W. Wetzel,et al. Network anatomy and in vivo physiology of visual cortical neurons , 2011, Nature.
[78] Omotara Ogundeyi,et al. A GAL4 driver resource for developmental and behavioral studies on the larval CNS of Drosophila. , 2014, Cell reports.
[79] S. Laughlin,et al. An Energy Budget for Signaling in the Grey Matter of the Brain , 2001, Journal of cerebral blood flow and metabolism : official journal of the International Society of Cerebral Blood Flow and Metabolism.
[80] Fred A. Hamprecht,et al. Automated Detection and Segmentation of Synaptic Contacts in Nearly Isotropic Serial Electron Microscopy Images , 2011, PloS one.
[81] Cengiz Günay,et al. Distal Spike Initiation Zone Location Estimation by Morphological Simulation of Ionic Current Filtering Demonstrated in a Novel Model of an Identified Drosophila Motoneuron , 2015, PLoS Comput. Biol..
[82] Mark Newman,et al. Networks: An Introduction , 2010 .