Joint sparse reconstruction of multi-contrast MRI images with graph based redundant wavelet transform

BackgroundMulti-contrast images in magnetic resonance imaging (MRI) provide abundant contrast information reflecting the characteristics of the internal tissues of human bodies, and thus have been widely utilized in clinical diagnosis. However, long acquisition time limits the application of multi-contrast MRI. One efficient way to accelerate data acquisition is to under-sample the k-space data and then reconstruct images with sparsity constraint. However, images are compromised at high acceleration factor if images are reconstructed individually. We aim to improve the images with a jointly sparse reconstruction and Graph-based redundant wavelet transform (GBRWT).MethodsFirst, a sparsifying transform, GBRWT, is trained to reflect the similarity of tissue structures in multi-contrast images. Second, joint multi-contrast image reconstruction is formulated as a ℓ2, 1 norm optimization problem under GBRWT representations. Third, the optimization problem is numerically solved using a derived alternating direction method.ResultsExperimental results in synthetic and in vivo MRI data demonstrate that the proposed joint reconstruction method can achieve lower reconstruction errors and better preserve image structures than the compared joint reconstruction methods. Besides, the proposed method outperforms single image reconstruction with joint sparsity constraint of multi-contrast images.ConclusionsThe proposed method explores the joint sparsity of multi-contrast MRI images under graph-based redundant wavelet transform and realizes joint sparse reconstruction of multi-contrast images. Experiment demonstrate that the proposed method outperforms the compared joint reconstruction methods as well as individual reconstructions. With this high quality image reconstruction method, it is possible to achieve the high acceleration factors by exploring the complementary information provided by multi-contrast MRI.

[1]  Di Guo,et al.  Multi-contrast brain magnetic resonance image super-resolution using the local weight similarity , 2017, BMC Medical Imaging.

[2]  L. Ying,et al.  Accelerated exponential parameterization of T2 relaxation with model‐driven low rank and sparsity priors (MORASA) , 2016, Magnetic resonance in medicine.

[3]  Zhong Chen,et al.  Undersampled MRI reconstruction with patch-based directional wavelets. , 2012, Magnetic resonance imaging.

[4]  A. Evans,et al.  MRI simulation-based evaluation of image-processing and classification methods , 1999, IEEE Transactions on Medical Imaging.

[5]  Vivek K Goyal,et al.  Multi‐contrast reconstruction with Bayesian compressed sensing , 2011, Magnetic resonance in medicine.

[6]  Di Guo,et al.  Magnetic resonance image reconstruction from undersampled measurements using a patch-based nonlocal operator , 2014, Medical Image Anal..

[7]  Di Guo,et al.  Sparse MRI reconstruction using multi-contrast image guided graph representation. , 2017, Magnetic resonance imaging.

[8]  D. Donoho,et al.  Sparse MRI: The application of compressed sensing for rapid MR imaging , 2007, Magnetic resonance in medicine.

[9]  M. Lustig,et al.  Compressed Sensing MRI , 2008, IEEE Signal Processing Magazine.

[10]  Yide Ma,et al.  Local sparsity enhanced compressed sensing magnetic resonance imaging in uniform discrete curvelet domain , 2015, BMC Medical Imaging.

[11]  Di Guo,et al.  Fast Multiclass Dictionaries Learning With Geometrical Directions in MRI Reconstruction , 2015, IEEE Transactions on Biomedical Engineering.

[12]  Yonina C. Eldar,et al.  Block-Sparse Signals: Uncertainty Relations and Efficient Recovery , 2009, IEEE Transactions on Signal Processing.

[13]  Dong Liang,et al.  Translational-invariant dictionaries for compressed sensing in magnetic resonance imaging , 2011, 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Macro.

[14]  D. Louis Collins,et al.  Design and construction of a realistic digital brain phantom , 1998, IEEE Transactions on Medical Imaging.

[15]  A. Majumdar,et al.  Joint reconstruction of multiecho MR images using correlated sparsity. , 2011, Magnetic resonance imaging.

[16]  Masoom A. Haider,et al.  Sparse reconstruction of compressive sensing MRI using cross-domain stochastically fully connected conditional random fields , 2015, BMC Medical Imaging.

[17]  Alan C. Evans,et al.  MRI Simulation Based Evaluation and Classifications Methods , 1999, IEEE Trans. Medical Imaging.

[18]  Yoram Bresler,et al.  MR Image Reconstruction From Highly Undersampled k-Space Data by Dictionary Learning , 2011, IEEE Transactions on Medical Imaging.

[19]  Farida Cheriet,et al.  Multimodal image registration of the scoliotic torso for surgical planning , 2013, BMC Medical Imaging.

[20]  Michael Elad,et al.  Image Processing Using Smooth Ordering of its Patches , 2012, IEEE Transactions on Image Processing.

[21]  Eero P. Simoncelli,et al.  Image quality assessment: from error visibility to structural similarity , 2004, IEEE Transactions on Image Processing.

[22]  Junzhou Huang,et al.  Fast multi-contrast MRI reconstruction. , 2014, Magnetic resonance imaging.

[23]  Di Guo,et al.  Projected Iterative Soft-Thresholding Algorithm for Tight Frames in Compressed Sensing Magnetic Resonance Imaging , 2015, IEEE Transactions on Medical Imaging.

[24]  Junfeng Yang,et al.  A Fast Alternating Direction Method for TVL1-L2 Signal Reconstruction From Partial Fourier Data , 2010, IEEE Journal of Selected Topics in Signal Processing.

[25]  Di Guo,et al.  Image reconstruction of compressed sensing MRI using graph-based redundant wavelet transform , 2016, Medical Image Anal..

[26]  Junzhou Huang,et al.  The Benefit of Group Sparsity , 2009 .