Homology with Saccharomyces cerevisiae RNA14 suggests that phenotypic suppression in Drosophila melanogaster by suppressor of forked occurs at the level of RNA stability.

The suppressor of forked [su(f)] locus of Drosophila melanogaster encodes at least one cell-autonomous vital function. Mutations at su(f) can affect the expression of unlinked genes where retroviral-like transposable elements are inserted. Changes in phenotype are correlated with changes in mRNA profiles, indicating that su(f) affects the production and/or stability of mRNAs. We have cloned the su(f) gene by P-element transposon tagging. Alterations in the DNA map of eight lethal alleles were detected in a 4.3-kb region. P-element-mediated transformation using a fragment including this interval rescued all aspects of the su(f) mutant phenotype. The gene is transcribed to produce a major 2.6-kb RNA and minor RNAs of 1.3 and 2.9 kb, which are present throughout development, being most abundant in embryos, pupae, and adult females. The major predicted gene product is an 84- kD protein that is homologous to RNA14 of Saccharomyces cerevisiae, a vital gene where mutation affects mRNA stability. This suggests that phenotypic modification by su(f) occurs at the level of RNA stability.

[1]  D. Lindsley,et al.  The Genome of Drosophila Melanogaster , 1992 .

[2]  K. O'hare,et al.  Structure and transcription of the singed locus of Drosophila melanogaster. , 1991, Genetics.

[3]  P. Bingham,et al.  Arginine/serine-rich domains of the su(wa) and tra RNA processing regulators target proteins to a subnuclear compartment implicated in splicing , 1991, Cell.

[4]  V. Corces,et al.  Mutations in the su(s) gene affect RNA processing in Drosophila melanogaster. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[5]  C. Burd,et al.  The multiple RNA-binding domains of the mRNA poly(A)-binding protein have different RNA-binding activities , 1991, Molecular and cellular biology.

[6]  L. Minvielle-Sebastia,et al.  Mutations in the yeast RNA14 and RNA15 genes result in an abnormal mRNA decay rate; sequence analysis reveals an RNA-binding domain in the RNA15 protein , 1991, Molecular and cellular biology.

[7]  J. Sterling,et al.  The Drosophila suppressor of sable gene encodes a polypeptide with regions similar to those of RNA-binding proteins , 1991, Molecular and cellular biology.

[8]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[9]  R. Fridell,et al.  A retrotransposon 412 insertion within an exon of the Drosophila melanogaster vermilion gene is spliced from the precursor RNA. , 1990, Genes & development.

[10]  S. Henikoff,et al.  Finding protein similarities with nucleotide sequence databases. , 1990, Methods in enzymology.

[11]  E. A. O'neill,et al.  The proline-rich transcriptional activator of CTF/NF-I is distinct from the replication and DNA binding domain , 1989, Cell.

[12]  D. Dorsett,et al.  Alteration of hsp82 gene expression by the gypsy transposon and suppressor genes in Drosophila melanogaster. , 1989, Genes & development.

[13]  N. Perrimon,et al.  Developmental genetics of loci at the base of the X chromosome of Drosophila melanogaster. , 1989, Genetics.

[14]  R. Kelley,et al.  The Drosophila su(Hw) gene, which controls the phenotypic effect of the gypsy transposable element, encodes a putative DNA-binding protein. , 1988, Genes & development.

[15]  F. Kafatos,et al.  Functional cDNA libraries from Drosophila embryos. , 1988, Journal of molecular biology.

[16]  D. Thierry-Mieg,et al.  Genetic interactions of modifier genes and modifiable alleles in Drosophila melanogaster. , 1988, Genetics.

[17]  J. Davies,et al.  Microcloning reveals a high frequency of repetitive sequences characteristic of chromosome 4 and the beta-heterochromatin of Drosophila melanogaster. , 1988, Proceedings of the National Academy of Sciences of the United States of America.

[18]  F. Winston,et al.  Isolation and analysis of a novel class of suppressor of Ty insertion mutations in Saccharomyces cerevisiae. , 1988, Genetics.

[19]  Stephen M. Mount,et al.  Partial revertants of the transposable element-associated suppressible allele white-apricot in Drosophila melanogaster: structures and responsiveness to genetic modifiers. , 1988, Genetics.

[20]  P. Bingham,et al.  Evidence that a regulatory gene autoregulates splicing of its transcript. , 1987, The EMBO journal.

[21]  W. Gehring,et al.  The white gene as a marker in a new P-element vector for gene transfer in Drosophila. , 1987, Nucleic acids research.

[22]  M. Kay,et al.  Developmental genetics of ribosome synthesis in Drosophila , 1987 .

[23]  A. McLachlan Drosophila forked locus , 1986, Molecular and cellular biology.

[24]  D. Davison,et al.  A detailed developmental and structural study of the transcriptional effects of insertion of the Copia transposon into the white locus of Drosophila melanogaster. , 1985, Genetics.

[25]  V. Pirrotta,et al.  Isolation and characterization of the zeste locus of Drosophila , 1985, The EMBO journal.

[26]  S. Parkhurst,et al.  forked, Gypsys, and suppressors in Drosophila , 1985, Cell.

[27]  S. Parkhurst,et al.  Characterization and developmental expression of a Drosophila ras oncogene , 1985, Molecular and cellular biology.

[28]  L. Kauvar,et al.  The engrailed locus of drosophila: Structural analysis of an embryonic transcript , 1985, Cell.

[29]  G. Rubin,et al.  Effects of transposable element insertions on RNA encoded by the white gene of Drosophila , 1984, Cell.

[30]  G. Fink,et al.  Mutations affecting Ty-mediated expression of the HIS4 gene of Saccharomyces cerevisiae. , 1984, Genetics.

[31]  J. Devereux,et al.  A comprehensive set of sequence analysis programs for the VAX , 1984, Nucleic Acids Res..

[32]  C. Queen,et al.  A comprehensive sequence analysis program for the IBM personal computer , 1984, Nucleic Acids Res..

[33]  N. Johnson,et al.  A comparison of mutation rates for specific loci and chromosome regions in dysgenic hybrid males of Drosophila melanogaster. , 1984, Genetics.

[34]  G. Rubin,et al.  Genetic transformation of Drosophila with transposable element vectors. , 1982, Science.

[35]  G. Rubin,et al.  Physical map of the white locus of Drosophila melanogaster. , 1982, Proceedings of the National Academy of Sciences of the United States of America.

[36]  T. Wilson,et al.  Studies on the female-sterile phenotype of 1(1)su(f)ts76a, a temperature-sensitive allele of the suppressor of forked mutation in Drosophila melanogaster. , 1980, Journal of embryology and experimental morphology.

[37]  M. A. Russell Pattern formation in the imaginal discs of a temperature-sensitive cell-lethal mutant of Drosophila melanogaster. , 1974, Developmental biology.

[38]  T. Wright,et al.  The developmental genetics of the temperature sensitive lethal allele of the suppressor of forked, 1(1)su(f)ts67g, in Drosophila melanogaster. , 1974, Genetics.