"Tag and Modify" Protein Conjugation with Dynamic Covalent Chemistry.

The development of small protein tags that exhibit bioorthogonality, bond stability, and reversibility, as well as biocompatibility, holds great promise for applications in cellular environments enabling controlled drug delivery or for the construction of dynamic protein complexes in biological environments. Herein, we report the first application of dynamic covalent chemistry both for purification and for reversible assembly of protein conjugates using interactions of boronic acid with diols and salicylhydroxamates. Incorporation of the boronic acid (BA) tag was performed in a site-selective fashion by applying disulfide rebridging strategy. As an example, a model protein enzyme (lysozyme) was modified with the BA tag and purified using carbohydrate-based column chromatography. Subsequent dynamic covalent "click-like" bioconjugation with a salicylhydroxamate modified fluorescent dye (BODIPY FL) was accomplished while retaining its original enzymatic activity.

[1]  J. Laurence,et al.  The role of thiols and disulfides on protein stability. , 2009, Current protein & peptide science.

[2]  Leif Bülow,et al.  Hydrophobic peptide tags as tools in bioseparation. , 2004, Trends in biotechnology.

[3]  D. Neri,et al.  Purification of biotinylated proteins on streptavidin resin: A protocol for quantitative elution , 2004, Proteomics.

[4]  T. Weil,et al.  pH responsive supramolecular core-shell protein hybrids , 2016 .

[5]  T. Weil,et al.  Directing intracellular supramolecular assembly with N-heteroaromatic quaterthiophene analogues , 2017, Nature Communications.

[6]  J. Szöllősi,et al.  Understanding FRET as a Research Tool for Cellular Studies , 2015, International journal of molecular sciences.

[7]  B. Lagu,et al.  Mild and efficient Lewis acid-promoted detritylation in the synthesis of N-hydroxy amides: a concise synthesis of (-)-Cobactin T. , 2007, The Journal of organic chemistry.

[8]  B. E. Kimmel,et al.  Optimized clinical performance of growth hormone with an expanded genetic code , 2011, Proceedings of the National Academy of Sciences.

[9]  I. Kolesnichenko,et al.  Dynamic covalent chemistry enables formation of antimicrobial peptide quaternary assemblies in a completely abiotic manner. , 2017, Nature chemistry.

[10]  K. Matsuzaki,et al.  Tag-probe labeling methods for live-cell imaging of membrane proteins. , 2009, Biochimica et biophysica acta.

[11]  Paul Polakis,et al.  Site-specific conjugation of a cytotoxic drug to an antibody improves the therapeutic index , 2008, Nature Biotechnology.

[12]  P. Schultz,et al.  A genetically encoded boronate-containing amino acid. , 2008, Angewandte Chemie.

[13]  L. Serpell,et al.  Amyloid fibrils , 2008, Prion.

[14]  M. Kimple,et al.  Overview of Affinity Tags for Protein Purification , 2004, Current protocols in protein science.

[15]  M. Barry,et al.  Avidin-based targeting and purification of a protein IX-modified, metabolically biotinylated adenoviral vector. , 2004, Molecular therapy : the journal of the American Society of Gene Therapy.

[16]  K. Yagishita,et al.  A study of the native-denatured (N in equilibrium with D) transition in lysozyme. III. Effect of alteration of net charge by acetylation. , 1976, Journal of biochemistry.

[17]  V. Guez,et al.  Role of individual disulfide bonds in hen lysozyme early folding steps , 2002, Protein science : a publication of the Protein Society.

[18]  D. Shugar The measurement of lysozyme activity and the ultra-violet inactivation of lysozyme. , 1952, Biochimica et biophysica acta.

[19]  Pedro M. P. Gois,et al.  A Three‐Component Assembly Promoted by Boronic Acids Delivers a Modular Fluorophore Platform (BASHY Dyes) , 2015, Chemistry.

[20]  Nikolaus Krall,et al.  Site-selective protein-modification chemistry for basic biology and drug development. , 2016, Nature chemistry.

[21]  J. Chin,et al.  Proteome labeling and protein identification in specific tissues and at specific developmental stages in an animal , 2014, Nature Biotechnology.

[22]  J. Trujillo-Ferrara,et al.  Boron-containing acids: preliminary evaluation of acute toxicity and access to the brain determined by Raman scattering spectroscopy. , 2014, Neurotoxicology.

[23]  Samie R Jaffrey,et al.  Assembling ligands in situ using bioorthogonal boronate ester synthesis. , 2010, Chemistry & biology.

[24]  Katsunori Tanaka,et al.  Exploring a Unique Reactivityof 6π-Azaelectrocyclization to Enzyme Inhibition,Natural Products Synthesis, and Molecular Imaging: AnApproach to Chemical Biology by Synthetic Chemists , 2011 .

[25]  C. Barbas,et al.  Facile and stabile linkages through tyrosine: bioconjugation strategies with the tyrosine-click reaction. , 2013, Bioconjugate chemistry.

[26]  R. C. Davies,et al.  Modification of lysine and arginine residues of lysozyme and the effect on enzymatic activity. , 1969, Biochimica et biophysica acta.

[27]  M. Distefano,et al.  Site-Specific PEGylation of Therapeutic Proteins , 2015, International journal of molecular sciences.

[28]  T. Weil,et al.  Reversible click reactions with boronic acids to build supramolecular architectures in water. , 2014, Chemistry, an Asian journal.

[29]  Yinan Wei,et al.  Dual-Functional-Tag-Facilitated Protein Labeling and Immobilization , 2017, ACS omega.

[30]  A. Ebens,et al.  Anti-CD22-MCC-DM1 and MC-MMAF conjugates: impact of assay format on pharmacokinetic parameters determination. , 2008, Bioconjugate chemistry.

[31]  T. Masuda,et al.  Effects of chemical modification of lysine residues on the sweetness of lysozyme. , 2005, Chemical senses.

[32]  T. Weil,et al.  Constructing hybrid protein zymogens through protective dendritic assembly. , 2014, Angewandte Chemie.

[33]  Matthew B Francis,et al.  Targeting the N terminus for site-selective protein modification. , 2017, Nature chemical biology.

[34]  T. James,et al.  Boronate affinity saccharide electrophoresis: A novel carbohydrate analysis tool , 2008, Electrophoresis.

[35]  Yinghua Jin,et al.  Recent advances in dynamic covalent chemistry. , 2013, Chemical Society reviews.

[36]  Gonçalo J L Bernardes,et al.  Advances in chemical protein modification. , 2015, Chemical reviews.

[37]  Pascal Dumy,et al.  Dynamic Expression of DNA Complexation with Self-assembled Biomolecular Clusters. , 2015, Angewandte Chemie.

[38]  S. Sen,et al.  Nanomaterials: amyloids reflect their brighter side , 2011, Nano reviews.

[39]  Tao Wang,et al.  Site‐Selective Disulfide Modification of Proteins: Expanding Diversity beyond the Proteome , 2016, Chemistry.

[40]  B. G. Davis,et al.  A "tag-and-modify" approach to site-selective protein modification. , 2011, Accounts of chemical research.

[41]  Katharine L. Diehl,et al.  Click and chemically triggered declick reactions through reversible amine and thiol coupling via a conjugate acceptor , 2016 .

[42]  M. Welland,et al.  Wet-spinning of amyloid protein nanofibers into multifunctional high-performance biofibers. , 2011, Biomacromolecules.

[43]  Mire Zloh,et al.  PEGylation of native disulfide bonds in proteins , 2006, Nature Protocols.