RUBY, a Putative Galactose Oxidase, Influences Pectin Properties and Promotes Cell-To-Cell Adhesion in the Seed Coat Epidermis of Arabidopsis

A putative galactose oxidase, RUBY, promotes cell-to-cell adhesion between seed coat epidermal cells and modifies galactosylated RG-I pectin in the seed coat mucilage of Arabidopsis. Cell-to-cell adhesion is essential for establishment of multicellularity. In plants, such adhesion is mediated through a middle lamella composed primarily of pectic polysaccharides. The molecular interactions that influence cell-to-cell adhesion are not fully understood. We have used Arabidopsis (Arabidopsis thaliana) seed coat mucilage as a model system to investigate interactions between cell wall carbohydrates. Using a forward-genetic approach, we have discovered a gene, RUBY PARTICLES IN MUCILAGE (RUBY), encoding a protein that is annotated as a member of the Auxiliary Activity 5 (AA5) family of Carbohydrate-Active Enzymes (Gal/glyoxal oxidases) and is secreted to the apoplast late in the differentiation of seed coat epidermal cells. We show that RUBY is required for the Gal oxidase activity of intact seeds; the oxidation of Gal in side-chains of rhamnogalacturonan-I (RG-I) present in mucilage-modified2 (mum2) mucilage, but not in wild-type mucilage; the retention of branched RG-I in the seed following extrusion; and the enhancement of cell-to-cell adhesion in the seed coat epidermis. These data support the hypothesis that RUBY is a Gal oxidase that strengthens pectin cohesion within the middle lamella, and possibly the mucilage of wild-type seed coat epidermal cells, through oxidation of RG-I Gal side-chains.

[1]  E. Master,et al.  A Novel Colletotrichum graminicola Raffinose Oxidase in the AA5 Family , 2017, Applied and Environmental Microbiology.

[2]  Yi Chen,et al.  Whole Genome and Core Genome Multilocus Sequence Typing and Single Nucleotide Polymorphism Analyses of Listeria monocytogenes Isolates Associated with an Outbreak Linked to Cheese, United States, 2013 , 2017, Applied and Environmental Microbiology.

[3]  Donagh Berry,et al.  Exploring a Possible Link between the Intestinal Microbiota and Feed Efficiency in Pigs , 2017, Applied and Environmental Microbiology.

[4]  A. Geitmann,et al.  The middle lamella—more than a glue , 2017, Physical biology.

[5]  S. Farris,et al.  An aerogel obtained from chemo-enzymatically oxidized fenugreek galactomannans as a versatile delivery system. , 2016, Carbohydrate polymers.

[6]  E. Record,et al.  Heterologous Production and Characterization of Two Glyoxal Oxidases from Pycnoporus cinnabarinus , 2016, Applied and Environmental Microbiology.

[7]  B. Henrissat,et al.  Structure–function characterization reveals new catalytic diversity in the galactose oxidase and glyoxal oxidase family , 2015, Nature Communications.

[8]  M. Tenkanen,et al.  Strengthening effect of nanofibrillated cellulose is dependent on enzymatically oxidized polysaccharide gel matrices , 2015 .

[9]  B. Usadel,et al.  MUCILAGE-RELATED10 Produces Galactoglucomannan That Maintains Pectin and Cellulose Architecture in Arabidopsis Seed Mucilage1[OPEN] , 2015, Plant Physiology.

[10]  D. Haltrich,et al.  Expression, purification, and characterization of galactose oxidase of Fusarium sambucinum in E. coli , 2015, Protein expression and purification.

[11]  R. Mendichi,et al.  Enzymatic and chemical oxidation of polygalactomannans from the seeds of a few species of leguminous plants and characterization of the oxidized products. , 2015, Journal of biotechnology.

[12]  D. Haltrich,et al.  Galactose Oxidase from Fusarium oxysporum - Expression in E. coli and P. pastoris and Biochemical Characterization , 2014, PloS one.

[13]  S. Mansfield,et al.  SALT-OVERLY SENSITIVE5 Mediates Arabidopsis Seed Coat Mucilage Adherence and Organization through Pectins1[W][OPEN] , 2014, Plant Physiology.

[14]  M. Hahn,et al.  CELLULOSE SYNTHASE-LIKE A2, a Glucomannan Synthase, Is Involved in Maintaining Adherent Mucilage Structure in Arabidopsis Seed1[C][W] , 2014, Plant Physiology.

[15]  R. Serimaa,et al.  Enzymatic oxidation as a potential new route to produce polysaccharide aerogels , 2014 .

[16]  A. Ragauskas,et al.  Ice templated and cross-linked xylan/nanocrystalline cellulose hydrogels. , 2014, Carbohydrate polymers.

[17]  M. Estelle,et al.  FLYING SAUCER1 Is a Transmembrane RING E3 Ubiquitin Ligase That Regulates the Degree of Pectin Methylesterification in Arabidopsis Seed Mucilage[W] , 2013, Plant Cell.

[18]  K. Katoh,et al.  MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability , 2013, Molecular biology and evolution.

[19]  Jignasha G. Patel,et al.  The FRIABLE1 Gene Product Affects Cell Adhesion in Arabidopsis , 2012, PloS one.

[20]  Johannes E. Schindelin,et al.  Fiji: an open-source platform for biological-image analysis , 2012, Nature Methods.

[21]  G. Haughn,et al.  Arabidopsis Seed Coat Mucilage is a Specialized Cell Wall that Can be Used as a Model for Genetic Analysis of Plant Cell Wall Structure and Function , 2012, Front. Plant Sci..

[22]  Maike van Ohlen,et al.  The role of CCoAOMT1 and COMT1 in Arabidopsis anthers , 2012, Planta.

[23]  Prisca Viehoever,et al.  GABI-Kat SimpleSearch: new features of the Arabidopsis thaliana T-DNA mutant database , 2011, Nucleic Acids Res..

[24]  Peter McCourt,et al.  Next-generation mapping of Arabidopsis genes. , 2011, The Plant journal : for cell and molecular biology.

[25]  A. Marion-Poll,et al.  CESA5 Is Required for the Synthesis of Cellulose with a Role in Structuring the Adherent Mucilage of Arabidopsis Seeds1[C][W] , 2011, Plant Physiology.

[26]  Fabio Aparecido Cordeiro,et al.  Identification of new galactose oxidase genes in Fusarium spp. , 2010, Journal of basic microbiology.

[27]  H. Brumer,et al.  A comparative summary of expression systems for the recombinant production of galactose oxidase , 2010, Microbial cell factories.

[28]  F. Guillon,et al.  Monoclonal antibodies to rhamnogalacturonan I backbone , 2010, Planta.

[29]  I. Eichhorn,et al.  Acetals and hemiacetals , 2010 .

[30]  Markku Reunanen,et al.  Oxidation of polysaccharides by galactose oxidase. , 2010, Journal of agricultural and food chemistry.

[31]  S. Fry,et al.  Feruloylated arabinoxylans are oxidatively cross-linked by extracellular maize peroxidase but not by horseradish peroxidase. , 2009, Molecular plant.

[32]  Andrej A. Arsovski,et al.  AtBXL1 Encodes a Bifunctional β-d-Xylosidase/α-l-Arabinofuranosidase Required for Pectic Arabinan Modification in Arabidopsis Mucilage Secretory Cells1[C][W][OA] , 2009, Plant Physiology.

[33]  Geoffrey J. Barton,et al.  Jalview Version 2—a multiple sequence alignment editor and analysis workbench , 2009, Bioinform..

[34]  B. Usadel,et al.  A subtilisin-like serine protease essential for mucilage release from Arabidopsis seed coats. , 2008, The Plant journal : for cell and molecular biology.

[35]  O. Loudet,et al.  A Naturally Occurring Mutation in an Arabidopsis Accession Affects a β-d-Galactosidase That Increases the Hydrophilic Potential of Rhamnogalacturonan I in Seed Mucilage[W] , 2007, The Plant Cell Online.

[36]  Diana S. Young,et al.  The Arabidopsis MUM2 Gene Encodes a β-Galactosidase Required for the Production of Seed Coat Mucilage with Correct Hydration Properties[W] , 2007, The Plant Cell Online.

[37]  A. Marion-Poll,et al.  In situ, chemical and macromolecular study of the composition of Arabidopsis thaliana seed coat mucilage. , 2007, Plant & cell physiology.

[38]  Jean-François Thibault,et al.  Homogalacturonan synthesis in Arabidopsis thaliana requires a Golgi-localized protein with a putative methyltransferase domain. , 2007, The Plant journal : for cell and molecular biology.

[39]  Michael J McPherson,et al.  The stacking tryptophan of galactose oxidase: a second-coordination sphere residue that has profound effects on tyrosyl radical behavior and enzyme catalysis. , 2007, Biochemistry.

[40]  G. Copenhaver,et al.  Separation of Arabidopsis Pollen Tetrads Is Regulated by QUARTET1, a Pectin Methylesterase Gene1[W] , 2006, Plant Physiology.

[41]  L. Lepiniec,et al.  Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana , 2006, Planta.

[42]  J. Thibault,et al.  Sugar beet (Beta vulgaris) pectins are covalently cross-linked through diferulic bridges in the cell wall. , 2005, Phytochemistry.

[43]  Stephen C. Fry,et al.  Oxidative coupling of a feruloyl-arabinoxylan trisaccharide (FAXX) in the walls of living maize cells requires endogenous hydrogen peroxide and is controlled by a low-Mr apoplastic inhibitor , 2005, Planta.

[44]  M. Bölker,et al.  A H2O2-producing glyoxal oxidase is required for filamentous growth and pathogenicity in Ustilago maydis , 2005, Molecular Genetics and Genomics.

[45]  N. Carpita,et al.  Loss of Highly Branched Arabinans and Debranching of Rhamnogalacturonan I Accompany Loss of Firm Texture and Cell Separation during Prolonged Storage of Apple1 , 2004, Plant Physiology.

[46]  Tadashi Ishii,et al.  Rhamnogalacturonan II: structure and function of a borate cross-linked cell wall pectic polysaccharide. , 2004, Annual review of plant biology.

[47]  S. Rhee,et al.  Microspore Separation in the quartet 3 Mutants of Arabidopsis Is Impaired by a Defect in a Developmentally Regulated Polygalacturonase Required for Pollen Mother Cell Wall Degradation1 , 2003, Plant Physiology.

[48]  M. Schmid,et al.  Genome-Wide Insertional Mutagenesis of Arabidopsis thaliana , 2003, Science.

[49]  J. Ralph,et al.  Sinapate dehydrodimers and sinapate-ferulate heterodimers in cereal dietary fiber. , 2003, Journal of agricultural and food chemistry.

[50]  S. Goff,et al.  A High-Throughput Arabidopsis Reverse Genetics System Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.004630. , 2002, The Plant Cell Online.

[51]  S. Satoh,et al.  A pectin glucuronyltransferase gene is essential for intercellular attachment in the plant meristem , 2002, Proceedings of the National Academy of Sciences of the United States of America.

[52]  Sophie Bouton,et al.  QUASIMODO1 Encodes a Putative Membrane-Bound Glycosyltransferase Required for Normal Pectin Synthesis and Cell Adhesion in Arabidopsis Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.004259. , 2002, The Plant Cell Online.

[53]  R. Atkinson,et al.  OVEREXPRESSION OF POLYGALACTURONASE IN TRANSGENIC APPLE TREES LEADS TO A RANGE OF NOVEL PHENOTYPES INVOLVING CHANGES IN CELL ADHESION , 2002 .

[54]  C. Chapple,et al.  Mutations that reduce sinapoylmalate accumulation in Arabidopsis thaliana define loci with diverse roles in phenylpropanoid metabolism. , 2001, Genetics.

[55]  B. Moffatt,et al.  Isolation and characterization of mutants defective in seed coat mucilage secretory cell development in Arabidopsis. , 2001, Plant physiology.

[56]  B. Christensen,et al.  Gelation of periodate oxidised scleroglucan (scleraldehyde) , 2001 .

[57]  S. Satoh,et al.  Absence of arabinan in the side chains of the pectic polysaccharides strongly associated with cell walls of Nicotiana plumbaginifolia non-organogenic callus with loosely attached constituent cells , 2001, Planta.

[58]  M. McCann,et al.  Developmental regulation of pectic epitopes during potato tuberisation , 2001, Planta.

[59]  J. Mikkelsen,et al.  Modulation of the Degree and Pattern of Methyl-esterification of Pectic Homogalacturonan in Plant Cell Walls , 2001, The Journal of Biological Chemistry.

[60]  C. Dover,et al.  Altered middle lamella homogalacturonan and disrupted deposition of (1-->5)-alpha-L-arabinan in the pericarp of Cnr, a ripening mutant of tomato. , 2001, Plant physiology.

[61]  D. H. Baker,et al.  Expression and characterization of a recombinant Fusarium spp. galactose oxidase , 2000 .

[62]  J. Mendenhall,et al.  Arabidopsis seed coat development: morphological differentiation of the outer integument. , 2000, The Plant journal : for cell and molecular biology.

[63]  Dirk Inzé,et al.  Histological Study of Seed Coat Development in Arabidopsis thaliana , 2000, Journal of Plant Research.

[64]  G. Haughn,et al.  Differentiation of mucilage secretory cells of the Arabidopsis seed coat. , 2000, Plant physiology.

[65]  J. Thibault,et al.  Ferulic acid and diferulic acids as components of sugar‐beet pectins and maize bran heteroxylans , 1999 .

[66]  S. Clough,et al.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana. , 1998, The Plant journal : for cell and molecular biology.

[67]  C. Reuzeau,et al.  Oxidative cross-linking of plasma membrane arabinogalactan proteins. , 1997, The Plant journal : for cell and molecular biology.

[68]  Ronald D. Hatfield,et al.  Ferulate cross-linking in cell walls isolated from maize cell suspensions , 1995 .

[69]  K. Roberts,et al.  Localization of cell wall proteins in relation to the developmental anatomy of the carrot root apex , 1994 .

[70]  U. Goodenough,et al.  Isodityrosine cross-linking mediates insolubilization of cell walls in Chlamydomonas. , 1993, The Plant cell.

[71]  P. Lerouge,et al.  Structural characterization of endo-glycanase-generated oligoglycosyl side chains of rhamnogalacturonan I. , 1993, Carbohydrate research.

[72]  C. Chapple,et al.  An Arabidopsis mutant defective in the general phenylpropanoid pathway. , 1992, The Plant cell.

[73]  C. Watkins,et al.  Cell Wall Changes in Nectarines (Prunus persica) : Solubilization and Depolymerization of Pectic and Neutral Polymers during Ripening and in Mealy Fruit. , 1992, Plant physiology.

[74]  M. McPherson,et al.  Galactose oxidase of Dactylium dendroides. Gene cloning and sequence analysis. , 1992, The Journal of biological chemistry.

[75]  N. Carpita,et al.  Changes in Esterification of the Uronic Acid Groups of Cell Wall Polysaccharides during Elongation of Maize Coleoptiles. , 1992, Plant physiology.

[76]  P. Kersten Glyoxal oxidase of Phanerochaete chrysosporium: its characterization and activation by lignin peroxidase. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[77]  P. Albersheim,et al.  Treatment of rhamnogalacturonan I with lithium in ethylenediamine , 1987 .

[78]  P. Kersten,et al.  Involvement of a new enzyme, glyoxal oxidase, in extracellular H2O2 production by Phanerochaete chrysosporium , 1987, Journal of bacteriology.

[79]  L. Staehelin,et al.  Immunogold localization of xyloglucan and rhamnogalacturonan I in the cell walls of suspension-cultured sycamore cells. , 1986, Plant physiology.

[80]  C. Somerville,et al.  Sulfonylurea-resistant mutants of Arabidopsis thaliana , 1986, Molecular and General Genetics MGG.

[81]  Ionel Ciucanu,et al.  A simple and rapid method for the permethylation of carbohydrates , 1984 .

[82]  R. Henry,et al.  A SIMPLE AND RAPID PREPARATION OF ALDITOL ACETATES FOR MONOSACCHARIDE ANALYSIS , 1983 .

[83]  P. Albersheim,et al.  Structure of Plant Cell Walls: X. RHAMNOGALACTURONAN I, A STRUCTURALLY COMPLEX PECTIC POLYSACCHARIDE IN THE WALLS OF SUSPENSION-CULTURED SYCAMORE CELLS. , 1980, Plant physiology.

[84]  B. Horecker,et al.  The D-galactose oxidase of Polyporus circinatus. , 1962, The Journal of biological chemistry.

[85]  M. Tenkanen,et al.  Thermally stable hydrogels from enzymatically oxidized polysaccharides , 2012 .

[86]  Venugopal Menduad,et al.  Subfunctionalization of cellulose synthases in seed coat epidermal cells mediate secondary radial wall synthesis and mucilage attachment , 2011 .

[87]  Allan Debono The role and behavior of Arabidopsis thaliana lipid transfer proteins during cuticular wax deposition , 2011 .

[88]  Andrej A. Arsovski,et al.  AtBXL1 Encodes a Bifunctional b-D-Xylosidase/ a-L-Arabinofuranosidase Required for Pectic Arabinan Modification in Arabidopsis Mucilage , 2009 .

[89]  R. Amasino,et al.  The WiscDsLox T-DNA collection: an arabidopsis community resource generated by using an improved high-throughput T-DNA sequencing pipeline , 2006, Journal of Plant Research.

[90]  R. Baeza-Yates,et al.  A rapid and efficient method for purifying high quality total RNA from peaches (Prunus persica) for functional genomics analyses. , 2005, Biological research.

[91]  R. Othman,et al.  Purification and properties of a beta-galactosidase from carambola fruit with significant activity towards cell wall polysaccharides. , 2005, Phytochemistry.

[92]  S. Fry Oxidative coupling of tyrosine and ferulic acid residues: Intra- and extra-protoplasmic occurrence, predominance of trimers and larger products, and possible role in inter-polymeric cross-linking , 2004, Phytochemistry Reviews.

[93]  Ronald D. Hatfield,et al.  Identification and synthesis of new ferulic acid dehydrodimers present in grass cell walls , 1994 .

[94]  J. Cillard,et al.  Hydroxyl radical scavenging activity of flavonoids , 1987 .

[95]  P. Albersheim,et al.  Isolation and characterization of plant cell walls and cell wall components , 1986 .

[96]  P. Albersheim,et al.  Structure and function of the primary cell walls of plants. , 1984, Annual review of biochemistry.

[97]  D. Kosman,et al.  Galactose oxidase from Dactylium dendroides. , 1982, Methods in Enzymology.

[98]  J. Thibault Automatisation du dosage des substances pectiques par la methode au metahydroxydiphenyle , 1979 .