Thinning Alters the Network Patterns and Keystone Taxa of Rhizosphere Soil Microbial Community in Chinese Fir Plantation
暂无分享,去创建一个
Jianing Li | Xinli Chen | Xiaodan Sun | Yuqian Ye | Qingwei Guan | Yu-qian Ye | Jiahao Zhao | Meiquan Wang
[1] Han Y. H. Chen,et al. Meta-analysis shows that plant mixtures increase soil phosphorus availability and plant productivity in diverse ecosystems , 2022, Nature Ecology & Evolution.
[2] Xiaodan Sun,et al. Establishing a soil quality index to assess the effect of thinning on soil quality in a Chinese fir plantation , 2022, European Journal of Forest Research.
[3] Guoqing Liang,et al. Soil Aggregation Shaped the Distribution and Interaction of Bacterial-Fungal Community Based on a 38-Year Fertilization Experiment in China , 2022, Frontiers in Microbiology.
[4] Jianqing Ding,et al. Climate warming alters the soil microbial association network and role of keystone taxa in determining wheat quality in the field , 2022, Agriculture, Ecosystems & Environment.
[5] Y. Kuzyakov,et al. Rhizosphere bacteriome structure and functions , 2022, Nature communications.
[6] B. Huyghebaert,et al. Disentangling the impact of contrasting agricultural management practices on soil microbial communities – Importance of rare bacterial community members , 2022, Soil Biology and Biochemistry.
[7] Yuan-liang Yuan,et al. Rhizosphere soil metabolites mediated microbial community changes of Pinus sylvestris var. mongolica across stand ages in the Mu Us Desert , 2022, Applied Soil Ecology.
[8] Tiantian Zhao,et al. Characteristics of the Fungal Communities and Co-occurrence Networks in Hazelnut Tree Root Endospheres and Rhizosphere Soil , 2021, Frontiers in Plant Science.
[9] Guanghua Wang,et al. Conventional and conservation tillage practices affect soil microbial co-occurrence patterns and are associated with crop yields , 2021 .
[10] Yuhong Dong,et al. Isolation and screening of multifunctional phosphate solubilizing bacteria and its growth-promoting effect on Chinese fir seedlings , 2021, Scientific Reports.
[11] T. Mohapatra,et al. A unique bacterial and archaeal diversity make mangrove a green production system compared to rice in wetland ecology: A metagenomic approach. , 2021, The Science of the total environment.
[12] Xiaorong Wei,et al. Erosion reduces soil microbial diversity, network complexity and multifunctionality , 2021, The ISME Journal.
[13] Mingxiang Xu,et al. Forest thinning increases soil carbon stocks in China , 2021 .
[14] Xiang-ming Xu,et al. Changes in the Microbiome in the Soil of an American Ginseng Continuous Plantation , 2020, Frontiers in Plant Science.
[15] Chuankuan Wang,et al. Impacts of forest thinning on soil microbial community structure and extracellular enzyme activities: A global meta-analysis , 2020 .
[16] Xiao-ping Xiao,et al. Effects of short-term manure nitrogen input on soil microbial community structure and diversity in a double-cropping paddy field of southern China , 2020, Scientific Reports.
[17] V. Souza,et al. Bacterial Diversity and Interaction Networks of Agave lechuguilla Rhizosphere Differ Significantly From Bulk Soil in the Oligotrophic Basin of Cuatro Cienegas , 2020, Frontiers in Plant Science.
[18] O. Y. Costa,et al. Cultivation-independent and cultivation-dependent metagenomes reveal genetic and enzymatic potential of microbial community involved in the degradation of a complex microbial polymer , 2020, Microbiome.
[19] B. Griffiths,et al. Root ethylene mediates rhizosphere microbial community reconstruction when chemically detecting cyanide produced by neighbouring plants , 2020, Microbiome.
[20] A. Kent,et al. Agricultural management and plant selection interactively affect rhizosphere microbial community structure and nitrogen cycling , 2019, Microbiome.
[21] M. Schrumpf,et al. Drivers of the composition of active rhizosphere bacterial communities in temperate grasslands , 2019, The ISME Journal.
[22] S. Sørensen,et al. Plasmids persist in a microbial community by providing fitness benefit to multiple phylotypes , 2019, The ISME Journal.
[23] Dong Wang,et al. Thinning increased fine root production, biomass, turnover rate and understory vegetation yield in a Chinese fir plantation , 2019, Forest Ecology and Management.
[24] Hairong Han,et al. The Effect of Forest Thinning on Soil Microbial Community Structure and Function , 2019, Forests.
[25] E. Kuramae,et al. Legacy of land use history determines reprogramming of plant physiology by soil microbiome , 2018, The ISME Journal.
[26] K. Stanford,et al. Evaluation of compost, vegetable and food waste as amendments to improve the composting of NaOH/NaClO-contaminated poultry manure , 2018, PloS one.
[27] H. Eizenberg,et al. Modeling microbial communities from atrazine contaminated soils promotes the development of biostimulation solutions , 2018, The ISME Journal.
[28] M. V. D. van der Heijden,et al. Agricultural intensification reduces microbial network complexity and the abundance of keystone taxa in roots , 2018, The ISME Journal.
[29] Zhong Zhao,et al. Effects of thinning intensity on understory vegetation and soil microbial communities of a mature Chinese pine plantation in the Loess Plateau. , 2018, The Science of the total environment.
[30] T. Cajthaml,et al. Decomposer food web in a deciduous forest shows high share of generalist microorganisms and importance of microbial biomass recycling , 2018, The ISME Journal.
[31] M. Grube,et al. Photoautotrophic organisms control microbial abundance, diversity, and physiology in different types of biological soil crusts , 2018, The ISME Journal.
[32] M. V. D. van der Heijden,et al. Cropping practices manipulate abundance patterns of root and soil microbiome members paving the way to smart farming , 2018, Microbiome.
[33] S. Eo,et al. Metagenomic approach revealed effects of forest thinning on bacterial communities in the forest soil of Mt. Janggunbong, South Korea , 2018, Journal of Mountain Science.
[34] B. Henrissat,et al. Feed in summer, rest in winter: microbial carbon utilization in forest topsoil , 2017, Microbiome.
[35] Xiulei Wang,et al. Community structure and elevational distribution pattern of soil Actinobacteria in alpine grasslands , 2017 .
[36] Jinchi Zhang,et al. Forest-type shift and subsequent intensive management affected soil organic carbon and microbial community in southeastern China , 2017, European Journal of Forest Research.
[37] Bin Hu,et al. Does thinning‐induced gap size result in altered soil microbial community in pine plantation in eastern Tibetan Plateau? , 2017, Ecology and evolution.
[38] Han Y. H. Chen,et al. Soil labile organic carbon and carbon-cycle enzyme activities under different thinning intensities in Chinese fir plantations , 2016 .
[39] J. Kirkegaard,et al. Evolution of bacterial communities in the wheat crop rhizosphere. , 2015, Environmental microbiology.
[40] E. Kuramae,et al. Taxonomical and functional microbial community selection in soybean rhizosphere , 2014, The ISME Journal.
[41] Kessy Abarenkov,et al. Resistance and resilience of the forest soil microbiome to logging-associated compaction , 2013, The ISME Journal.
[42] Susan Holmes,et al. phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data , 2013, PloS one.
[43] T. Bruns,et al. Dispersal in microbes: fungi in indoor air are dominated by outdoor air and show dispersal limitation at short distances , 2013, The ISME Journal.
[44] M. Lavigne,et al. Fine-root dynamics change during stand development and in response to thinning in balsam fir (Abies balsamea L. Mill.) forests , 2012 .
[45] Chin H. Wu,et al. Resistance, resilience and recovery: aquatic bacterial dynamics after water column disturbance. , 2011, Environmental microbiology.
[46] Jizhong Zhou,et al. The phylogenetic composition and structure of soil microbial communities shifts in response to elevated carbon dioxide , 2011, The ISME Journal.
[47] Miquel De Cáceres,et al. Improving indicator species analysis by combining groups of sites , 2010 .
[48] William A. Walters,et al. Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample , 2010, Proceedings of the National Academy of Sciences.
[49] Mark D. Robinson,et al. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..
[50] R. Knight,et al. A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses , 2009, The ISME Journal.
[51] M. Sogin,et al. Correction: Exploring Microbial Diversity and Taxonomy Using SSU rRNA Hypervariable Tag Sequencing , 2008, PLoS Genetics.
[52] F. Michel,et al. Evaluation of extraction and purification methods for obtaining PCR-amplifiable DNA from compost for microbial community analysis. , 2002, Journal of microbiological methods.
[53] P. Darrah. Models of the rhizosphere , 1991, Plant and Soil.
[54] S. A. Barber,et al. Bicarbonate Accumulation and pH Changes at the Soybean (Glycine max (L.) Merr.) Root-Soil Interface 1 , 1969 .
[55] Y. Liao,et al. Assessing synergistic effects of crop rotation pattern, tillage practice, and rhizosphere effect on soil bacterial community structure and assembly in China's Loess Plateau farmlands , 2022, Applied Soil Ecology.
[56] Wenfa Xiao,et al. Effects of thinning intensity and understory removal on soil microbial community in Pinus massoniana plantations of subtropical China , 2021 .
[57] Gábor Csárdi,et al. The igraph software package for complex network research , 2006 .