Molecular programs of fibrotic change in aging human lung
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D. Aran | P. Wolters | M. Matthay | W. Eckalbar | D. Farber | R. Matsumoto | S. Christenson | Seoyeon Lee | M. N. Islam | J. Bhattacharya | J. Arron | M. Bhattacharya | S. Bhattacharya | D. DePianto | Jasmine G. Lee | K. Boostanpour | L. Magee | Masaru Kubota | G. Jin | Dvir Aran | Rei Matsumoto | M. Islam
[1] M. Selman,et al. Transcriptomic profile of the mice aging lung is associated with inflammation and apoptosis as important pathways , 2021, Aging.
[2] I. Noth,et al. Antibody-mediated depletion of CCR10+EphA3+ cells ameliorates fibrosis in IPF , 2021, JCI insight.
[3] G. Teng,et al. Molecular mapping of interstitial lung disease reveals a phenotypically distinct senescent basal epithelial cell population , 2021, JCI insight.
[4] Nicolas Borisov,et al. Algorithmic Annotation of Functional Roles for Components of 3,044 Human Molecular Pathways , 2021, Frontiers in Genetics.
[5] Anushya Muruganujan,et al. The Gene Ontology resource: enriching a GOld mine , 2020, Nucleic Acids Res..
[6] Y. Oh,et al. Aging-related changes in the gene expression profile of human lungs , 2020, Aging.
[7] M. Matthay,et al. The endogenous capacity to produce proinflammatory mediators by the ex vivo human perfused lung , 2020, Intensive Care Medicine Experimental.
[8] Irving L. Weissman,et al. A single-cell transcriptomic atlas characterizes ageing tissues in the mouse , 2020, Nature.
[9] D. Lynch,et al. Interstitial lung abnormalities detected incidentally on CT: a Position Paper from the Fleischner Society. , 2020, The Lancet. Respiratory medicine.
[10] Michael J. Podolsky,et al. Age-dependent regulation of cell-mediated collagen turnover. , 2020, JCI insight.
[11] Hyun Je Kim,et al. Single-cell transcriptome analysis of human skin identifies novel fibroblast subpopulation and enrichment of immune subsets in atopic dermatitis. , 2020, The Journal of allergy and clinical immunology.
[12] P. Wolters,et al. Peripheral blood leukocyte telomere length is associated with survival of sepsis patients , 2019, European Respiratory Journal.
[13] G. A. Fleming,et al. To help aging populations, classify organismal senescence , 2019, Science.
[14] Hyun J. Kim,et al. Peripheral blood proteomic profiling of idiopathic pulmonary fibrosis biomarkers in the multicentre IPF-PRO Registry , 2019, Respiratory Research.
[15] Irving L. Weissman,et al. A molecular cell atlas of the human lung from single cell RNA sequencing , 2019, Nature.
[16] P. Kapahi,et al. From discoveries in ageing research to therapeutics for healthy ageing , 2019, Nature.
[17] A. Shilatifard,et al. Single-Cell Transcriptomic Analysis of Human Lung Provides Insights into the Pathobiology of Pulmonary Fibrosis , 2019, American journal of respiratory and critical care medicine.
[18] S. Straus,et al. Rate of normal lung function decline in ageing adults: a systematic review of prospective cohort studies , 2019, BMJ Open.
[19] M. Zeng,et al. The Role of S1P and the Related Signaling Pathway in the Development of Tissue Fibrosis , 2019, Front. Pharmacol..
[20] Atul J. Butte,et al. Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage , 2018, Nature Immunology.
[21] Anushya Muruganujan,et al. PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools , 2018, Nucleic Acids Res..
[22] Melissa J. Davis,et al. Single sample scoring of molecular phenotypes , 2018, BMC Bioinformatics.
[23] M. Serrano,et al. Targeting senescence , 2018, Nature Medicine.
[24] Nancy R. Zhang,et al. Bulk tissue cell type deconvolution with multi-subject single-cell expression reference , 2018, Nature Communications.
[25] Fabian J Theis,et al. An atlas of the aging lung mapped by single cell transcriptomics and deep tissue proteomics , 2018, Nature Communications.
[26] D. Allison,et al. Senolytics Improve Physical Function and Increase Lifespan in Old Age , 2018, Nature Medicine.
[27] Yossi Ovadya,et al. Strategies targeting cellular senescence. , 2018, The Journal of clinical investigation.
[28] Paul Hoffman,et al. Integrating single-cell transcriptomic data across different conditions, technologies, and species , 2018, Nature Biotechnology.
[29] G. Raghu,et al. Time for a change: is idiopathic pulmonary fibrosis still idiopathic and only fibrotic? , 2018, The Lancet. Respiratory medicine.
[30] A. Friedman,et al. Human immunology studies using organ donors: Impact of clinical variations on immune parameters in tissues and circulation , 2018, American journal of transplantation : official journal of the American Society of Transplantation and the American Society of Transplant Surgeons.
[31] G. Washko,et al. Histopathology of Interstitial Lung Abnormalities in the Context of Lung Nodule Resections , 2017, American journal of respiratory and critical care medicine.
[32] R. Goldschmeding,et al. Short telomere length in IPF lung associates with fibrotic lesions and predicts survival , 2017, PloS one.
[33] J. Sznajder,et al. The Intersection of Aging Biology and the Pathobiology of Lung Diseases: A Joint NHLBI/NIA Workshop. , 2017, The journals of gerontology. Series A, Biological sciences and medical sciences.
[34] Yufeng Shen,et al. Human Tissue-Resident Memory T Cells Are Defined by Core Transcriptional and Functional Signatures in Lymphoid and Mucosal Sites. , 2017, Cell reports.
[35] Wiggert A. van Cappellen,et al. Targeted Apoptosis of Senescent Cells Restores Tissue Homeostasis in Response to Chemotoxicity and Aging , 2017, Cell.
[36] A. Oberg,et al. Cellular senescence mediates fibrotic pulmonary disease , 2017, Nature Communications.
[37] H. Hatabu,et al. Interstitial Lung Abnormalities Are Associated with Acute Respiratory Distress Syndrome , 2017, American journal of respiratory and critical care medicine.
[38] Raúl San José Estépar,et al. Development and Progression of Interstitial Lung Abnormalities in the Framingham Heart Study. , 2016, American journal of respiratory and critical care medicine.
[39] J. Austin,et al. Rheumatoid arthritis-associated autoantibodies and subclinical interstitial lung disease: the Multi-Ethnic Study of Atherosclerosis , 2016, Thorax.
[40] P. Wolters,et al. Telomere dysfunction in alveolar epithelial cells causes lung remodeling and fibrosis. , 2016, JCI insight.
[41] Andrew H. Beck,et al. PharmacoGx: an R package for analysis of large pharmacogenomic datasets , 2015, Bioinform..
[42] M. Belvisi,et al. DNA damage response at telomeres contributes to lung aging and chronic obstructive pulmonary disease , 2015, American journal of physiology. Lung cellular and molecular physiology.
[43] Qing-Yu He,et al. DOSE: an R/Bioconductor package for disease ontology semantic and enrichment analysis , 2015, Bioinform..
[44] O. Eickelberg,et al. Hallmarks of the ageing lung , 2015, European Respiratory Journal.
[45] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[46] Yufeng Shen,et al. Spatial Map of Human T Cell Compartmentalization and Maintenance over Decades of Life , 2014, Cell.
[47] V. Thannickal,et al. Reversal of Persistent Fibrosis in Aging by Targeting Nox4-Nrf2 Redox Imbalance , 2014, Science Translational Medicine.
[48] Michael J. Cronce,et al. Type 2 alveolar cells are stem cells in adult lung. , 2013, The Journal of clinical investigation.
[49] K. Atabai,et al. Always cleave up your mess: targeting collagen degradation to treat tissue fibrosis. , 2013, American Journal of Physiology - Lung cellular and Molecular Physiology.
[50] E. Blackburn,et al. Molecular and Cellular Pathobiology The Major Reverse Transcriptase – Incompetent Splice Variant of the Human Telomerase Protein Inhibits Telomerase Activity but Protects from Apoptosis , 2013 .
[51] Ellen T. Gelfand,et al. The Genotype-Tissue Expression (GTEx) project , 2013, Nature Genetics.
[52] Thomas R. Gingeras,et al. STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..
[53] N. LeBrasseur,et al. Clearance of p16Ink4a-positive senescent cells delays ageing-associated disorders , 2011, Nature.
[54] K. Kuwano,et al. Accelerated epithelial cell senescence in IPF and the inhibitory role of SIRT6 in TGF-β-induced senescence of human bronchial epithelial cells. , 2011, American journal of physiology. Lung cellular and molecular physiology.
[55] P. Lansdorp,et al. Short telomeres are a risk factor for idiopathic pulmonary fibrosis , 2008, Proceedings of the National Academy of Sciences.
[56] J. Wain,et al. The lysophosphatidic acid receptor LPA1 links pulmonary fibrosis to lung injury by mediating fibroblast recruitment and vascular leak , 2008, Nature Medicine.
[57] C. E. Perlman,et al. Alveolar expansion imaged by optical sectioning microscopy. , 2007, Journal of applied physiology.
[58] G. Rubenfeld,et al. Prediction of death and prolonged mechanical ventilation in acute lung injury , 2007, Critical care.
[59] G J Roth,et al. Inhibition of PDGF, VEGF and FGF signalling attenuates fibrosis , 2007, European Respiratory Journal.
[60] Paul A Clemons,et al. The Connectivity Map: Using Gene-Expression Signatures to Connect Small Molecules, Genes, and Disease , 2006, Science.
[61] N. Reichek. The Multi-Ethnic Study of Atherosclerosis (MESA) and myocardial function: where is the boundary between risk factor and disease? , 2006, Journal of the American College of Cardiology.
[62] N. Carter,et al. A DNA damage checkpoint response in telomere-initiated senescence , 2003, Nature.
[63] M. Daly,et al. PGC-1α-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes , 2003, Nature Genetics.
[64] Brian Seed,et al. Dynamic imaging of collagen and its modulation in tumors in vivo using second-harmonic generation , 2003, Nature Medicine.
[65] M. Matthay,et al. Assessment of lungs rejected for transplantation and implications for donor selection , 2002, The Lancet.
[66] R. Cawthon. Telomere measurement by quantitative PCR. , 2002, Nucleic acids research.
[67] J. Bhattacharya,et al. [Ca(2+)](i) oscillations regulate type II cell exocytosis in the pulmonary alveolus. , 2000, American journal of physiology. Lung cellular and molecular physiology.