The Microbiota and Microbiome in Aging: Potential Implications in Health and Age‐Related Diseases

Advances in bacterial deoxyribonucleic acid sequencing allow for characterization of the human commensal bacterial community (microbiota) and its corresponding genome (microbiome). Surveys of healthy adults reveal that a signature composite of bacteria characterizes each unique body habitat (e.g., gut, skin, oral cavity, vagina). A myriad of clinical changes, including a basal proinflammatory state (inflamm‐aging), that directly interface with the microbiota of older adults and enhance susceptibility to disease accompany aging. Studies in older adults demonstrate that the gut microbiota correlates with diet, location of residence (e.g., community dwelling, long‐term care settings), and basal level of inflammation. Links exist between the microbiota and a variety of clinical problems plaguing older adults, including physical frailty, Clostridium difficile colitis, vulvovaginal atrophy, colorectal carcinoma, and atherosclerotic disease. Manipulation of the microbiota and microbiome of older adults holds promise as an innovative strategy to influence the development of comorbidities associated with aging.

[1]  Cynthia L Sears,et al.  Microbes, microbiota, and colon cancer. , 2014, Cell host & microbe.

[2]  P. Brigidi,et al.  Combating inflammaging through a Mediterranean whole diet approach: The NU-AGE project's conceptual framework and design , 2014, Mechanisms of Ageing and Development.

[3]  William B. Mair,et al.  You Are What You Host: Microbiome Modulation of the Aging Process , 2014, Cell.

[4]  E. Pamer,et al.  Fecal microbiota transplantation: effectiveness, complexities, and lingering concerns , 2014, Mucosal Immunology.

[5]  Ruth R. Montgomery,et al.  Age-dependent dysregulation of innate immunity , 2013, Nature Reviews Immunology.

[6]  M. Meyerson,et al.  Fusobacterium nucleatum potentiates intestinal tumorigenesis and modulates the tumor-immune microenvironment. , 2013, Cell host & microbe.

[7]  M. Hattori,et al.  Treg induction by a rationally selected mixture of Clostridia strains from the human microbiota , 2013, Nature.

[8]  Jonathan R. Brestoff,et al.  Commensal bacteria at the interface of host metabolism and the immune system , 2013, Nature Immunology.

[9]  S. Mazmanian,et al.  Innate immune recognition of the microbiota promotes host-microbial symbiosis , 2013, Nature Immunology.

[10]  P. Libby,et al.  Immune effector mechanisms implicated in atherosclerosis: from mice to humans. , 2013, Immunity.

[11]  P. Mackowiak Recycling Metchnikoff: Probiotics, the Intestinal Microbiome and the Quest for Long Life , 2013, Front. Public Health.

[12]  S. Hazen,et al.  Intestinal microbial metabolism of phosphatidylcholine and cardiovascular risk. , 2013, The New England journal of medicine.

[13]  P. Brigidi,et al.  Metabolic Signatures of Extreme Longevity in Northern Italian Centenarians Reveal a Complex Remodeling of Lipids, Amino Acids, and Gut Microbiota Metabolism , 2013, PloS one.

[14]  C. Holmes Review: Systemic inflammation and Alzheimer's disease , 2013, Neuropathology and applied neurobiology.

[15]  E. Zoetendal,et al.  Duodenal infusion of donor feces for recurrent Clostridium difficile. , 2013, The New England journal of medicine.

[16]  S. Kritchevsky,et al.  Lipopolysaccharide-binding protein, a surrogate marker of microbial translocation, is associated with physical function in healthy older adults. , 2012, The journals of gerontology. Series A, Biological sciences and medical sciences.

[17]  Taane G. Clark,et al.  Targeted Restoration of the Intestinal Microbiota with a Simple, Defined Bacteriotherapy Resolves Relapsing Clostridium difficile Disease in Mice , 2012, PLoS pathogens.

[18]  D. Sinderen,et al.  Gut microbiota composition correlates with diet and health in the elderly , 2012, Nature.

[19]  Katherine H. Huang,et al.  Structure, Function and Diversity of the Healthy Human Microbiome , 2012, Nature.

[20]  J. Clemente,et al.  Human gut microbiome viewed across age and geography , 2012, Nature.

[21]  B. Birren,et al.  Genomic analysis identifies association of Fusobacterium with colorectal carcinoma. , 2012, Genome research.

[22]  Liping Zhao,et al.  Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers , 2011, The ISME Journal.

[23]  Richard A. Moore,et al.  Fusobacterium nucleatum infection is prevalent in human colorectal carcinoma. , 2012, Genome research.

[24]  A. Manges,et al.  Systematic review of intestinal microbiota transplantation (fecal bacteriotherapy) for recurrent Clostridium difficile infection. , 2011, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[25]  Jean M. Macklaim,et al.  Vaginal Microbiome and Epithelial Gene Array in Post-Menopausal Women with Moderate to Severe Dryness , 2011, PloS one.

[26]  S. J. Griffiths,et al.  Report from the second cytomegalovirus and immunosenescence workshop , 2011, Immunity & Ageing.

[27]  Ageing of the human metaorganism: the microbial counterpart , 2011, AGE.

[28]  Rob Knight,et al.  Human oral, gut, and plaque microbiota in patients with atherosclerosis , 2010, Proceedings of the National Academy of Sciences.

[29]  L. T. Angenent,et al.  Succession of microbial consortia in the developing infant gut microbiome , 2010, Proceedings of the National Academy of Sciences.

[30]  R. Sacco,et al.  Periodontal bacteria and hypertension: the oral infections and vascular disease epidemiology study (INVEST) , 2010, Journal of hypertension.

[31]  Marcus J. Claesson,et al.  Composition, variability, and temporal stability of the intestinal microbiota of the elderly , 2010, Proceedings of the National Academy of Sciences.

[32]  R. Knight,et al.  Delivery mode shapes the acquisition and structure of the initial microbiota across multiple body habitats in newborns , 2010, Proceedings of the National Academy of Sciences.

[33]  Roy D Sleator,et al.  The human superorganism - of microbes and men. , 2010, Medical hypotheses.

[34]  R. Knight,et al.  Bacterial Community Variation in Human Body Habitats Across Space and Time , 2009, Science.

[35]  H. Taslim Clostridium difficile infection in the elderly. , 2009, Acta medica Indonesiana.

[36]  Ruth Ann Luna,et al.  Metagenomic pyrosequencing and microbial identification. , 2009, Clinical chemistry.

[37]  H. Viernstein,et al.  Randomized, double-blind, placebo-controlled study of oral lactobacilli to improve the vaginal flora of postmenopausal women. , 2008, European journal of obstetrics, gynecology, and reproductive biology.

[38]  R. Knight,et al.  The Human Microbiome Project , 2007, Nature.

[39]  S. Studenski,et al.  Comorbidity in older adults: nosology of impairment, diseases, and conditions. , 2007, The journals of gerontology. Series A, Biological sciences and medical sciences.

[40]  V. Mooser,et al.  Metagenomics: the role of the microbiome in cardiovascular diseases , 2006, Current opinion in lipidology.

[41]  Ryan T Demmer,et al.  Periodontal Microbiota and Carotid Intima-Media Thickness: The Oral Infections and Vascular Disease Epidemiology Study (INVEST) , 2005, Circulation.

[42]  L. Ferrucci,et al.  Identification of a geographic area characterized by extreme longevity in the Sardinia island: the AKEA study , 2004, Experimental Gerontology.

[43]  Ruslan Medzhitov,et al.  Recognition of Commensal Microflora by Toll-Like Receptors Is Required for Intestinal Homeostasis , 2004, Cell.

[44]  T. Yoshikawa,et al.  Epidemiology and unique aspects of aging and infectious diseases. , 2000, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[45]  C. Franceschi,et al.  Inflamm‐aging: An Evolutionary Perspective on Immunosenescence , 2000 .

[46]  D. Relman,et al.  Sequence-based identification of microbial pathogens: a reconsideration of Koch's postulates , 1996, Clinical microbiology reviews.

[47]  C. Woese,et al.  Phylogenetic structure of the prokaryotic domain: The primary kingdoms , 1977, Proceedings of the National Academy of Sciences of the United States of America.

[48]  T. Luckey Introduction to intestinal microecology. , 1972, The American journal of clinical nutrition.

[49]  A BULLEID,et al.  The Microbe Hunters , 1954, Proceedings of the Royal Society of Medicine.