Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda restringensis type strain (B1 T )
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Natalia N. Ivanova | S. Spring | N. Kyrpides | H. Klenk | V. Markowitz | S. Lucas | J. Eisen | P. Hugenholtz | A. Lapidus | K. Liolios | I. Pagani | Krishna Palaniappan | M. Göker | T. Woyke | K. Mavromatis | L. Goodwin | Amrita Pati | M. Nolan | Jan-Fang Cheng | J. Bristow | J. Detter | L. Hauser | M. Land | S. Pitluck | Amy Chen | M. Rohde | C. Pan | N. Hammon | Marcel Huntemann | R. Tapia | N. Mikhailova | E. Brambilla | Shweta Deshpande | H. Teshima | Matt Nolan
[1] I-Min A. Chen,et al. The Genomes OnLine Database (GOLD) v.4: status of genomic and metagenomic projects and their associated metadata , 2011, Nucleic Acids Res..
[2] W. Wade,et al. Bergey’s Manual of Systematic Bacteriology , 2012 .
[3] G. Garrity. Bergey’s Manual® of Systematic Bacteriology , 2012, Springer New York.
[4] Anton Güntsch,et al. The DNA bank network: the start from a german initiative. , 2011, Biopreservation and biobanking.
[5] H. Klenk,et al. En route to a genome-based classification of Archaea and Bacteria? , 2010, Systematic and applied microbiology.
[6] Natalia N. Ivanova,et al. GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes , 2010, Nature Methods.
[7] George M. Garrity,et al. NamesforLife BrowserTool takes expertise out of the database and puts it right in the browser , 2010 .
[8] Miriam L. Land,et al. Trace: Tennessee Research and Creative Exchange Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification Recommended Citation Prodigal: Prokaryotic Gene Recognition and Translation Initiation Site Identification , 2022 .
[9] Natalia N. Ivanova,et al. A phylogeny-driven genomic encyclopaedia of Bacteria and Archaea , 2009, Nature.
[10] I-Min A. Chen,et al. IMG ER: a system for microbial genome annotation expert review and curation , 2009, Bioinform..
[11] Y. H. Kim,et al. Muricauda olearia sp. nov., isolated from crude-oil-contaminated seawater, and emended description of the genus Muricauda. , 2009, International journal of systematic and evolutionary microbiology.
[12] Alexandros Stamatakis,et al. How Many Bootstrap Replicates Are Necessary? , 2009, RECOMB.
[13] J. Rougemont,et al. A rapid bootstrap algorithm for the RAxML Web servers. , 2008, Systematic biology.
[14] E. Birney,et al. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. , 2008, Genome research.
[15] Chris F. Taylor,et al. The minimum information about a genome sequence (MIGS) specification , 2008, Nature Biotechnology.
[16] James R. Cole,et al. Taxonomic Outline of the Bacteria and Archaea , Release 7 . 7 March 6 , 2007 . Part 9 – The Bacteria : Phylum “ Firmicutes ” : Class “ Bacilli ” , 2007 .
[17] Eoin L. Brodie,et al. Greengenes, a Chimera-Checked 16S rRNA Gene Database and Workbench Compatible with ARB , 2006, Applied and Environmental Microbiology.
[18] T. Oh,et al. Muricauda flavescens sp. nov. and Muricauda aquimarina sp. nov., isolated from a salt lake near Hwajinpo Beach of the East Sea in Korea, and emended description of the genus Muricauda. , 2005, International journal of systematic and evolutionary microbiology.
[19] H. G. Trüper. The nomenclatural types of the orders Acholeplasmatales, Halanaerobiales, Halobacteriales, Methanobacteriales, Methanococcales, Methanomicrobiales, Planctomycetales, Prochlorales, Sulfolobales, Thermococcales, Thermoproteales and Verrucomicrobiales are the genera Acholeplasma, Halanaerobium, Halobac , 2005, International journal of systematic and evolutionary microbiology.
[20] Y. Nakagawa,et al. Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family. , 2002, International journal of systematic and evolutionary microbiology.
[21] Christopher J. Lee,et al. Multiple sequence alignment using partial order graphs , 2002, Bioinform..
[22] D. Swofford. PAUP*: Phylogenetic analysis using parsimony (*and other methods), Version 4.0b10 , 2002 .
[23] T. Cavalier-smith,et al. The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification. , 2002, International journal of systematic and evolutionary microbiology.
[24] M. Rohde,et al. Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment. , 2001, International journal of systematic and evolutionary microbiology.
[25] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[26] Wei Qian,et al. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. , 2000, Molecular biology and evolution.
[27] P. Vandamme,et al. Cutting a gordian knot: Emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom nov (basonym, Cytophaga aquatilis Strohl and Tait 1978). , 1996 .
[28] M. Aguirre,et al. Validation of the publication of new names and new combinations previously effectively published outside the IJSB. , 1996, International journal of systematic bacteriology.
[29] Strain Cip,et al. Validation of the publication of new names and new combinations previously effectively published outside the IJSB. List No. 40. , 1992, International journal of systematic bacteriology.
[30] E. Myers,et al. Basic local alignment search tool. , 1990, Journal of molecular biology.
[31] O. Kandler,et al. Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[32] Martin F. Porter,et al. An algorithm for suffix stripping , 1997, Program.