Extracting Rules for Cell Segmentation in Corneal Endothelial Cell Images Using GP

In tissue engineering of the corneal endothelium, extracting feature values of cultured cells from cell images helps us to automatically judge whether they are transplantable. To extract feature values, accurate image processing for cell segmentation is needed. We previously proposed a method that constructs a tree-structural image-processing filter by automatically combining known image-processing filters. In this paper, we propose a more accurate method that can be applied to images in which statistics differ in different regions. The proposed method prepares two types of nodes. One type of node represents known image-processing filters, and the other represents conditional branches, which determine the divergent direction using the statistics of the cell images. Moreover, the proposed method optimizes their combination by using genetic programming (GP). The proposed method is compared with the existing method using GP and specialist software for analyzing cell images. The results show that the proposed method has superior accuracy.

[1]  Tomoharu Nagao,et al.  Automatic construction of tree-structural image transformations using genetic programming , 1999, Proceedings 10th International Conference on Image Analysis and Processing.

[2]  Anne E Carpenter,et al.  CellProfiler: image analysis software for identifying and quantifying cell phenotypes , 2006, Genome Biology.

[3]  D. E. Goldberg,et al.  Genetic Algorithms in Search , 1989 .

[4]  Tomoyuki Hiroyasu,et al.  Comparison study of controlling bloat model of GP in constructing filter for cell image segmentation problems , 2012, 2012 IEEE Congress on Evolutionary Computation.

[5]  Jitendra Malik,et al.  A database of human segmented natural images and its application to evaluating segmentation algorithms and measuring ecological statistics , 2001, Proceedings Eighth IEEE International Conference on Computer Vision. ICCV 2001.

[6]  Luc Vincent,et al.  Watersheds in Digital Spaces: An Efficient Algorithm Based on Immersion Simulations , 1991, IEEE Trans. Pattern Anal. Mach. Intell..

[7]  Kazuo Tsubota,et al.  Corneal Disease and Regenerative Medicine , 2010 .

[8]  Tomoharu Nagao,et al.  Automatic construction of tree-structural image transformation using genetic programming , 1999, Proceedings 1999 International Conference on Image Processing (Cat. 99CH36348).

[9]  Noriko Koizumi,et al.  [Cultivated corneal endothelial cell sheet transplantation in a primate model]. , 2009, Nippon Ganka Gakkai zasshi.

[10]  David E. Goldberg,et al.  Genetic Algorithms in Search Optimization and Machine Learning , 1988 .

[11]  Noriko Koizumi,et al.  [Progress in the development of tissue engineering of the cornea in Japan]. , 2007, Nippon Ganka Gakkai zasshi.

[12]  John R. Koza,et al.  Genetic programming - on the programming of computers by means of natural selection , 1993, Complex adaptive systems.

[13]  Michael D. Abràmoff,et al.  Image processing with ImageJ , 2004 .