Single cell transcriptional signatures of the human placenta in term and preterm parturition
暂无分享,去创建一个
R. Pique-Regi | R. Romero | S. Hassan | E. Sendler | F. Luca | A. Tarca | N. Gomez‐Lopez | V. Garcia-Flores | Yi Xu | Adi L.Tarca | Y. Leng
[1] Paul J. Hoffman,et al. Comprehensive Integration of Single-Cell Data , 2018, Cell.
[2] R. Romero,et al. Effector and Activated T Cells Induce Preterm Labor and Birth That Is Prevented by Treatment with Progesterone , 2019, The Journal of Immunology.
[3] M. Chance,et al. Myometrial Transcriptional Signatures of Human Parturition , 2019, Front. Genet..
[4] Yvan Saeys,et al. A comparison of single-cell trajectory inference methods , 2019, Nature Biotechnology.
[5] David L. Gibbs,et al. Genomic and molecular characterization of preterm birth , 2019, Proceedings of the National Academy of Sciences.
[6] R. Romero,et al. Targeted expression profiling by RNA-Seq improves detection of cellular dynamics during pregnancy and identifies a role for T cells in term parturition , 2019, Scientific Reports.
[7] Lai Guan Ng,et al. Dimensionality reduction for visualizing single-cell data using UMAP , 2018, Nature Biotechnology.
[8] A. Butte,et al. Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage , 2018, Nature Immunology.
[9] Joe Leigh Simpson,et al. Enabling precision medicine in neonatology, an integrated repository for preterm birth research , 2018, Scientific Data.
[10] Michael J. T. Stubbington,et al. Single-cell reconstruction of the early maternal–fetal interface in humans , 2018, Nature.
[11] T. Lehtimäki,et al. Genetic and environmental perturbations lead to regulatory decoherence , 2018, bioRxiv.
[12] Zev J. Gartner,et al. DoubletFinder: Doublet detection in single-cell RNA sequencing data using artificial nearest neighbors , 2018, bioRxiv.
[13] Robert Tibshirani,et al. Noninvasive blood tests for fetal development predict gestational age and preterm delivery , 2018, Science.
[14] Paul Hoffman,et al. Integrating single-cell transcriptomic data across different conditions, technologies, and species , 2018, Nature Biotechnology.
[15] N. Price,et al. Comparative analysis of gene expression in maternal peripheral blood and monocytes during spontaneous preterm labor , 2018, American journal of obstetrics and gynecology.
[16] Chun Jimmie Ye,et al. Multiplexed droplet single-cell RNA-sequencing using natural genetic variation , 2017, Nature Biotechnology.
[17] R. Romero,et al. Preterm labor in the absence of acute histologic chorioamnionitis is characterized by cellular senescence of the chorioamniotic membranes , 2017, American journal of obstetrics and gynecology.
[18] Peiyong Jiang,et al. Integrative single-cell and cell-free plasma RNA transcriptomics elucidates placental cellular dynamics , 2017, Proceedings of the National Academy of Sciences.
[19] Russell B. Fletcher,et al. Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics , 2017, bioRxiv.
[20] A. Butte,et al. xCell: digitally portraying the tissue cellular heterogeneity landscape , 2017, bioRxiv.
[21] G. Wagner,et al. Single-cell transcriptomics of the human placenta: inferring the cell communication network of the maternal-fetal interface , 2017, Genome research.
[22] C. Simón,et al. Severe pre-eclampsia is associated with alterations in cytotrophoblasts of the smooth chorion , 2017, Development.
[23] R. Romero,et al. In vivo T‐cell activation by a monoclonal αCD3ε antibody induces preterm labor and birth , 2016, American journal of reproductive immunology.
[24] A. Litonjua,et al. The Role of Vitamin D in the Transcriptional Program of Human Pregnancy , 2016, PloS one.
[25] Siobhan M. Dolan,et al. Maternal Whole Blood Gene Expression at 18 and 28 Weeks of Gestation Associated with Spontaneous Preterm Birth in Asymptomatic Women , 2016, PloS one.
[26] Elizabeth J. Robertson,et al. Single-cell RNA-seq reveals cell type-specific transcriptional signatures at the maternal–foetal interface during pregnancy , 2016, Nature Communications.
[27] Roberto Romero,et al. An M1-like Macrophage Polarization in Decidual Tissue during Spontaneous Preterm Labor That Is Attenuated by Rosiglitazone Treatment , 2016, The Journal of Immunology.
[28] Robert N. Taylor,et al. Telomere Fragment Induced Amnion Cell Senescence: A Contributor to Parturition? , 2015, PloS one.
[29] G. Saade,et al. Chorioamniotic membrane senescence: a signal for parturition? , 2015, American journal of obstetrics and gynecology.
[30] N. Larocque,et al. The role of chorionic cytotrophoblasts in the smooth chorion fusion with parietal decidua. , 2015, Placenta.
[31] R. Romero,et al. Isolation of Leukocytes from the Human Maternal-fetal Interface. , 2015, Journal of visualized experiments : JoVE.
[32] Allon M. Klein,et al. Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells , 2015, Cell.
[33] Evan Z. Macosko,et al. Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets , 2015, Cell.
[34] E. Norwitz,et al. Molecular Regulation of Parturition: The Role of the Decidual Clock. , 2015, Cold Spring Harbor perspectives in medicine.
[35] T. Freeman,et al. Macrophage Gene Expression Associated with Remodeling of the Prepartum Rat Cervix: Microarray and Pathway Analyses , 2015, PloS one.
[36] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[37] S. Fisher,et al. Preterm labor: One syndrome, many causes , 2014, Science.
[38] Hon Nian Chua,et al. Whole Blood Gene Expression Profile Associated with Spontaneous Preterm Birth in Women with Threatened Preterm Labor , 2014, PloS one.
[39] A. Blanks,et al. Assessment of myometrial transcriptome changes associated with spontaneous human labour by high‐throughput RNA‐seq , 2014, Experimental physiology.
[40] Cynthia A. Kalita,et al. Transcriptome interrogation of human myometrium identifies differentially expressed sense-antisense pairs of protein-coding and long non-coding RNA genes in spontaneous labor at term , 2014, The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians.
[41] S. Lye,et al. Infiltration of myeloid cells into decidua is a critical early event in the labour cascade and post-partum uterine remodelling , 2013, Journal of cellular and molecular medicine.
[42] Ann-Beth Moller,et al. National, regional, and worldwide estimates of preterm birth rates in the year 2010 with time trends since 1990 for selected countries: a systematic analysis and implications , 2012, The Lancet.
[43] Guangchuang Yu,et al. clusterProfiler: an R package for comparing biological themes among gene clusters. , 2012, Omics : a journal of integrative biology.
[44] S. Lye,et al. Macrophages Infiltrate the Human and Rat Decidua During Term and Preterm Labor: Evidence That Decidual Inflammation Precedes Labor1 , 2012, Biology of reproduction.
[45] S. Fisher,et al. Establishment of Human Trophoblast Progenitor Cell Lines from the Chorion , 2011, Stem cells.
[46] S. Drăghici,et al. Characterization of the myometrial transcriptome and biological pathways of spontaneous human labor at term , 2010, Journal of perinatal medicine.
[47] R. Romero,et al. Characterization of the transcriptome of chorioamniotic membranes at the site of rupture in spontaneous labor at term. , 2010, American journal of obstetrics and gynecology.
[48] Louis J Muglia,et al. The enigma of spontaneous preterm birth. , 2010, The New England journal of medicine.
[49] H. Bradshaw,et al. Uterine-specific p53 deficiency confers premature uterine senescence and promotes preterm birth in mice. , 2010, The Journal of clinical investigation.
[50] Roberto Romero,et al. Nuclear factor-kappa B localization and function within intrauterine tissues from term and preterm labor and cultured fetal membranes , 2010, Reproductive biology and endocrinology : RB&E.
[51] S. Drăghici,et al. A molecular signature of an arrest of descent in human parturition. , 2009, American journal of obstetrics and gynecology.
[52] R. Romero,et al. Fetal membranes as an interface between inflammation and metabolism: Increased Aquaporin 9 expression in the presence of spontaneous labor at term and chorioamnionitis , 2009, The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians.
[53] Sorin Draghici,et al. The transcriptome of cervical ripening in human pregnancy before the onset of labor at term: Identification of novel molecular functions involved in this process , 2009, The journal of maternal-fetal & neonatal medicine : the official journal of the European Association of Perinatal Medicine, the Federation of Asia and Oceania Perinatal Societies, the International Society of Perinatal Obstetricians.
[54] R. Romero,et al. Activation of TLR3 in the trophoblast is associated with preterm delivery. , 2009, American journal of reproductive immunology.
[55] Sorin Draghici,et al. Signature pathways identified from gene expression profiles in the human uterine cervix before and after spontaneous term parturition. , 2007, American journal of obstetrics and gynecology.
[56] R. Romero,et al. The preterm parturition syndrome , 2006, BJOG : an international journal of obstetrics and gynaecology.
[57] Gerard Tromp,et al. The transcriptome of the uterine cervix before and after spontaneous term parturition. , 2006, American journal of obstetrics and gynecology.
[58] Gerard Tromp,et al. Human spontaneous labor without histologic chorioamnionitis is characterized by an acute inflammation gene expression signature. , 2006, American journal of obstetrics and gynecology.
[59] R. Romero,et al. Insights into the Physiology of Childbirth Using Transcriptomics , 2006 .
[60] P. Bennett,et al. The role of nuclear factor kappa B in human labour. , 2005, Reproduction.
[61] Pablo Tamayo,et al. Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[62] R. Romero,et al. Divergent Trophoblast Responses to Bacterial Products Mediated by TLRs , 2004, The Journal of Immunology.
[63] G. Mor,et al. Toll-like receptor-2 and -4 in the chorioamniotic membranes in spontaneous labor at term and in preterm parturition that are associated with chorioamnionitis. , 2004, American journal of obstetrics and gynecology.
[64] M. Mitchell,et al. Tumor necrosis factor-related apoptosis-inducing ligand (TRAIL), TRAIL receptors, and the soluble receptor osteoprotegerin in human gestational membranes and amniotic fluid during pregnancy and labor at term and preterm. , 2003, The Journal of clinical endocrinology and metabolism.
[65] D. Cabrol,et al. A Functional Genomic Study to Identify Differential Gene Expression in the Preterm and Term Human Myometrium1 , 2003, Biology of reproduction.
[66] W. Gibb,et al. Localization of Nuclear Factor-κB (NFκB) and Inhibitory Factor-κB (IκB) in Human Fetal Membranes and Decidua at Term and Preterm Delivery , 2002 .
[67] Jane E. Norman,et al. Immunolocalization of Proinflammatory Cytokines in Myometrium, Cervix, and Fetal Membranes During Human Parturition at Term1 , 2002, Biology of reproduction.
[68] M. Mitchell,et al. Cytokine abundance in placental tissues: evidence of inflammatory activation in gestational membranes with term and preterm parturition. , 1999, American journal of obstetrics and gynecology.
[69] E. Norwitz,et al. The control of labor. , 1999, The New England journal of medicine.
[70] J. Baldassare,et al. The nuclear transcription factor NF-κB mediates interleukin-1β–induced expression of cyclooxygenase-2 in human myometrial cells , 1999 .
[71] J. Copel,et al. The role of amniotic fluid L-selectin, GRO-alpha, and interleukin-8 in the pathogenesis of intraamniotic infection. , 1998, American journal of obstetrics and gynecology.
[72] R. Romero,et al. Amniotic Fluid Interleukin‐6 Determinations Are of Diagnostic and Prognostic Value in Preterm Labor , 1993, American journal of reproductive immunology.
[73] R. Romero,et al. Tumor necrosis factor in preterm and term labor. , 1992, American journal of obstetrics and gynecology.
[74] R. Romero,et al. Interleukin‐1α and Interleukin‐1 β in Preterm and Term Human Parturition , 1992 .
[75] R. Romero,et al. Neutrophil attractant/activating peptide-1/interleukin-8 in term and preterm parturition. , 1991, American journal of obstetrics and gynecology.
[76] R. Romero,et al. Cytokines in normal and abnormal parturition: elevated amniotic fluid interleukin-6 levels in women with premature rupture of membranes associated with intrauterine infection. , 1991, Cytokine.
[77] R. Romero,et al. Amniotic fluid interleukin 6 in preterm labor. Association with infection. , 1990, The Journal of clinical investigation.
[78] M. Mitchell,et al. Amniotic fluid interleukin-1 in spontaneous labor at term. , 1990, The Journal of reproductive medicine.
[79] J. Hobbins,et al. Infection and labor. IV. Cachectin‐tumor necrosis factor in the amniotic fluid of women with intraamniotic infection and preterm labor , 1989, American journal of obstetrics and gynecology.
[80] J. Hobbins,et al. Infection and labor. III. Interleukin‐1: A signal for the onset of parturition , 1989, American journal of obstetrics and gynecology.
[81] Thomas R. Gingeras,et al. STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..
[82] Fiona Jordan,et al. Term labor is associated with a core inflammatory response in human fetal membranes, myometrium, and cervix. , 2009, American journal of obstetrics and gynecology.
[83] Y. Wada,et al. Immunohistochemical distribution of Toll-like receptor 4 in term and preterm human placentas from normal and complicated pregnancy including chorioamnionitis. , 2004, Human pathology.
[84] Jane E Norman,et al. Leukocyte density and pro-inflammatory cytokine expression in human fetal membranes, decidua, cervix and myometrium before and during labour at term. , 2003, Molecular human reproduction.