Feasibility of predicting pancreatic neuroendocrine tumor grade using deep features from unsupervised learning

This paper aimed to investigate if deep image features extracted via sparse autoencoder (SAE) could be used to preoperatively predict histologic grade in pancreatic neuroendocrine tumors (pNETs). In this study, a total of 114 patients from two institutions were involved. The deep image features were extracted based on the sparse autoencoder network via a 2000-time iteration. Considering the possible prediction error due to the small patient data size, we performed 10-fold cross-validation. To find the optimal hidden size, we set the size as a range of 6-10. The maximum relevance minimum redundancy (mRMR) features selection algorithm was used to select the most histologic graderelated image features. Then the radiomics signature was generated by using the selected features with Support Vector Machine (SVM), multivariable logistic regression (MLR) and artificial neural networks (ANN) methods. The prediction performance was evaluated using AUC value.

[1]  Zhenyu Liu,et al.  Deep learning provides a new computed tomography-based prognostic biomarker for recurrence prediction in high-grade serous ovarian cancer. , 2019, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[2]  G. Petersen,et al.  Pancreatic neuroendocrine tumors (PNETs): incidence, prognosis and recent trend toward improved survival. , 2008, Annals of oncology : official journal of the European Society for Medical Oncology.

[3]  Zhongqiu Wang,et al.  Pancreatic neuroendocrine neoplasms at magnetic resonance imaging: comparison between grade 3 and grade 1/2 tumors , 2017, OncoTargets and therapy.

[4]  D. Dong,et al.  A multi-sequence and habitat-based MRI radiomics signature for preoperative prediction of MGMT promoter methylation in astrocytomas with prognostic implication , 2018, European Radiology.

[5]  Young Jae Kim,et al.  Pancreatic neuroendocrine tumour (PNET): Staging accuracy of MDCT and its diagnostic performance for the differentiation of PNET with uncommon CT findings from pancreatic adenocarcinoma , 2016, European Radiology.

[6]  T. Beyer,et al.  Glioma Survival Prediction with Combined Analysis of In Vivo 11C-MET PET Features, Ex Vivo Features, and Patient Features by Supervised Machine Learning , 2017, The Journal of Nuclear Medicine.

[7]  Jérôme Cros,et al.  Prediction of pancreatic neuroendocrine tumour grade with MR imaging features: added value of diffusion-weighted imaging , 2017, European Radiology.

[8]  Shu-Ju Tu,et al.  Localized thin-section CT with radiomics feature extraction and machine learning to classify early-detected pulmonary nodules from lung cancer screening , 2018, Physics in medicine and biology.

[9]  Elsa Rosado,et al.  Pancreatic neuroendocrine tumors: correlation between histogram analysis of apparent diffusion coefficient maps and tumor grade , 2015, Abdominal Imaging.

[10]  Osamu Matsui,et al.  Is the combination of MR and CT findings useful in determining the tumor grade of pancreatic neuroendocrine tumors? , 2017, Japanese Journal of Radiology.