Improved application of independent component analysis to functional magnetic resonance imaging study via linear projection techniques

Spatial Independent component analysis (sICA) has been widely used to analyze functional magnetic resonance imaging (fMRI) data. The well accepted implicit assumption is the spatially statistical independency of intrinsic sources identified by sICA, making the sICA applications difficult for data in which there exist interdependent sources and confounding factors. This interdependency can arise, for instance, from fMRI studies investigating two tasks in a single session. In this study, we introduced a linear projection approach and considered its utilization as a tool to separate task‐related components from two‐task fMRI data. The robustness and feasibility of the method are substantiated through simulation on computer data and fMRI real rest data. Both simulated and real two‐task fMRI experiments demonstrated that sICA in combination with the projection method succeeded in separating spatially dependent components and had better detection power than pure model‐based method when estimating activation induced by each task as well as both tasks. Hum Brain Mapp, 2009. © 2007 Wiley‐Liss, Inc.

[1]  Vincent J. Schmithorst,et al.  Separate cortical networks involved in music perception: preliminary functional MRI evidence for modularity of music processing , 2005, NeuroImage.

[2]  Alan C. Evans,et al.  A new anatomical landmark for reliable identification of human area V5/MT: a quantitative analysis of sulcal patterning. , 2000, Cerebral cortex.

[3]  S Makeig,et al.  Analysis of fMRI data by blind separation into independent spatial components , 1998, Human brain mapping.

[4]  Stephen M. Smith,et al.  Investigations into resting-state connectivity using independent component analysis , 2005, Philosophical Transactions of the Royal Society B: Biological Sciences.

[5]  M. McKeown Detection of Consistently Task-Related Activations in fMRI Data with Hybrid Independent Component Analysis , 2000, NeuroImage.

[6]  E. DeYoe,et al.  Reduction of physiological fluctuations in fMRI using digital filters , 1996, Magnetic resonance in medicine.

[7]  T. Sejnowski,et al.  Independent component analysis of fMRI data: Examining the assumptions , 1998, Human brain mapping.

[8]  Aapo Hyvärinen,et al.  Independent component analysis of fMRI group studies by self-organizing clustering , 2005, NeuroImage.

[9]  J.C. Rajapakse,et al.  Exploratory analysis of brain connectivity with ICA , 2006, IEEE Engineering in Medicine and Biology Magazine.

[10]  Andreas Bartels,et al.  The chronoarchitecture of the human brain—natural viewing conditions reveal a time-based anatomy of the brain , 2004, NeuroImage.

[11]  E C Wong,et al.  Processing strategies for time‐course data sets in functional mri of the human brain , 1993, Magnetic resonance in medicine.

[12]  S. Zeki,et al.  The position and topography of the human colour centre as revealed by functional magnetic resonance imaging. , 1997, Brain : a journal of neurology.

[13]  L. K. Hansen,et al.  Plurality and Resemblance in fMRI Data Analysis , 1999, NeuroImage.

[14]  Vincent J Schmithorst,et al.  Empirical validation of the triple-code model of numerical processing for complex math operations using functional MRI and group Independent Component Analysis of the mental addition and subtraction of fractions , 2004, NeuroImage.

[15]  R. Turner,et al.  Event-Related fMRI: Characterizing Differential Responses , 1998, NeuroImage.

[16]  B. Biswal,et al.  Blind source separation of multiple signal sources of fMRI data sets using independent component analysis. , 1999, Journal of computer assisted tomography.

[17]  Terrence J. Sejnowski,et al.  An Information-Maximization Approach to Blind Separation and Blind Deconvolution , 1995, Neural Computation.

[18]  V. Haughton,et al.  Whole-brain functional MR imaging activation from a finger-tapping task examined with independent component analysis. , 2000, AJNR. American journal of neuroradiology.

[19]  E. Formisano,et al.  Functional connectivity as revealed by spatial independent component analysis of fMRI measurements during rest , 2004, Human brain mapping.

[20]  J C Gore,et al.  An roc approach for evaluating functional brain mr imaging and postprocessing protocols , 1995, Magnetic resonance in medicine.

[21]  Colin Studholme,et al.  An overlap invariant entropy measure of 3D medical image alignment , 1999, Pattern Recognit..

[22]  J. Pekar,et al.  fMRI Activation in a Visual-Perception Task: Network of Areas Detected Using the General Linear Model and Independent Components Analysis , 2001, NeuroImage.

[23]  William T. Newsome,et al.  Cortical microstimulation influences perceptual judgements of motion direction , 1990, Nature.

[24]  Thomas E. Nichols,et al.  Non-white noise in fMRI: Does modelling have an impact? , 2006, NeuroImage.

[25]  V D Calhoun,et al.  Spatial and temporal independent component analysis of functional MRI data containing a pair of task‐related waveforms , 2001, Human brain mapping.

[26]  Stephen M Smith,et al.  Applying FSL to the FIAC data: Model‐based and model‐free analysis of voice and sentence repetition priming , 2006, Human brain mapping.

[27]  Andreas Bartels,et al.  Brain dynamics during natural viewing conditions—A new guide for mapping connectivity in vivo , 2005, NeuroImage.

[28]  Li Yao,et al.  Spatial Independent Component Analysis of Multitask-Related Activation in fMRI Data , 2003, ICANN.

[29]  J A Sorenson,et al.  ROC methods for evaluation of fMRI techniques , 1996, Magnetic resonance in medicine.

[30]  R. Turner,et al.  Characterizing Evoked Hemodynamics with fMRI , 1995, NeuroImage.

[31]  Karl J. Friston,et al.  Unified SPM–ICA for fMRI analysis , 2005, NeuroImage.

[32]  Stephen M. Smith,et al.  fMRI resting state networks define distinct modes of long-distance interactions in the human brain , 2006, NeuroImage.