A genomewide scan identifies two novel loci involved in specific language impairment.

Approximately 4% of English-speaking children are affected by specific language impairment (SLI), a disorder in the development of language skills despite adequate opportunity and normal intelligence. Several studies have indicated the importance of genetic factors in SLI; a positive family history confers an increased risk of development, and concordance in monozygotic twins consistently exceeds that in dizygotic twins. However, like many behavioral traits, SLI is assumed to be genetically complex, with several loci contributing to the overall risk. We have compiled 98 families drawn from epidemiological and clinical populations, all with probands whose standard language scores fall > or =1.5 SD below the mean for their age. Systematic genomewide quantitative-trait-locus analysis of three language-related measures (i.e., the Clinical Evaluation of Language Fundamentals-Revised [CELF-R] receptive and expressive scales and the nonword repetition [NWR] test) yielded two regions, one on chromosome 16 and one on 19, that both had maximum LOD scores of 3.55. Simulations suggest that, of these two multipoint results, the NWR linkage to chromosome 16q is the most significant, with empirical P values reaching 10(-5), under both Haseman-Elston (HE) analysis (LOD score 3.55; P=.00003) and variance-components (VC) analysis (LOD score 2.57; P=.00008). Single-point analyses provided further support for involvement of this locus, with three markers, under the peak of linkage, yielding LOD scores >1.9. The 19q locus was linked to the CELF-R expressive-language score and exceeds the threshold for suggestive linkage under all types of analysis performed-multipoint HE analysis (LOD score 3.55; empirical P=.00004) and VC (LOD score 2.84; empirical P=.00027) and single-point HE analysis (LOD score 2.49) and VC (LOD score 2.22). Furthermore, both the clinical and epidemiological samples showed independent evidence of linkage on both chromosome 16q and chromosome 19q, indicating that these may represent universally important loci in SLI and, thus, general risk factors for language impairment.

[1]  D. Wechsler Wechsler Intelligence Scale for Children , 2020, Definitions.

[2]  R. Elston,et al.  The investigation of linkage between a quantitative trait and a marker locus , 1972, Behavior genetics.

[3]  J. Stevenson,et al.  The Prevalence of Language Delay in a Population of Three‐year‐old Children and its Association with General Retardation , 1976, Developmental medicine and child neurology.

[4]  S. Hodge,et al.  The information contained in multiple sibling pairs , 1984, Genetic epidemiology.

[5]  Is otitis media a major cause of specific developmental language disorders? , 1986, The British journal of disorders of communication.

[6]  Dorothy M. Aram,et al.  Family History of Children with Developmental Language Disorders , 1986, Perceptual and motor skills.

[7]  D. Cantwell,et al.  Prevalence and type of psychiatric disorder and developmental disorders in three speech and language groups. , 1987, Journal of communication disorders.

[8]  D. Bishop,et al.  A prospective study of the relationship between specific language impairment, phonological disorders and reading retardation. , 1990, Journal of child psychology and psychiatry, and allied disciplines.

[9]  B A Lewis,et al.  A study of developmental speech and language disorders in twins. , 1992, Journal of speech and hearing research.

[10]  R. Hubert,et al.  Whole genome amplification from a single cell: implications for genetic analysis. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[11]  H. Catts,et al.  The relationship between speech-language impairments and reading disabilities. , 1993, Journal of speech and hearing research.

[12]  A Baddeley,et al.  A developmental deficit in short-term phonological memory: implications for language and reading. , 1993, Memory.

[13]  S. C. Jenkins,et al.  Chromosome–specific microsatellite sets for fluorescence–based, semi–automated genome mapping , 1994, Nature Genetics.

[14]  D W Fulker,et al.  Quantitative trait locus for reading disability on chromosome 6. , 1994, Science.

[15]  A D Baddeley,et al.  The Children's Test of Nonword Repetition: a test of phonological working memory. , 1994, Memory.

[16]  R. Kroll,et al.  Seven-year follow-up of speech/language-impaired and control children: speech/language stability and outcome. , 1994, Journal of the American Academy of Child and Adolescent Psychiatry.

[17]  C. Amos Robust variance-components approach for assessing genetic linkage in pedigrees. , 1994, American journal of human genetics.

[18]  C Donlan,et al.  GENETIC BASIS OF SPECIFIC LANGUAGE IMPAIRMENT: EVIDENCE FROM A TWIN STUDY , 1995, Developmental medicine and child neurology.

[19]  E. Lander,et al.  Genetic dissection of complex traits: guidelines for interpreting and reporting linkage results , 1995, Nature Genetics.

[20]  E. Lander,et al.  Complete multipoint sib-pair analysis of qualitative and quantitative traits. , 1995, American journal of human genetics.

[21]  Wayne A. Secord,et al.  Clinical Evaluation of Language Fundamentals-Revised Clinical Assistant , 1995 .

[22]  J B Tomblin,et al.  A system for the diagnosis of specific language impairment in kindergarten children. , 1996, Journal of speech and hearing research.

[23]  L Kruglyak,et al.  Parametric and nonparametric linkage analysis: a unified multipoint approach. , 1996, American journal of human genetics.

[24]  Cécile Fizames,et al.  A comprehensive genetic map of the human genome based on 5,264 microsatellites , 1996, Nature.

[25]  C Donlan,et al.  Nonword repetition as a behavioural marker for inherited language impairment: evidence from a twin study. , 1996, Journal of child psychology and psychiatry, and allied disciplines.

[26]  E L Grigorenko,et al.  Susceptibility loci for distinct components of developmental dyslexia on chromosomes 6 and 15. , 1997, American journal of human genetics.

[27]  K. Stromswold,et al.  Genetics of spoken language disorders. , 1998, Human biology.

[28]  A. Baddeley,et al.  The phonological loop as a language learning device. , 1998, Psychological review.

[29]  J. Law,et al.  Screening for speech and language delay: a systematic review of the literature. , 1998, Health technology assessment.

[30]  J. Tomblin,et al.  Heritability of poor language achievement among twins. , 1998, Journal of speech, language, and hearing research : JSLHR.

[31]  Simon E. Fisher,et al.  Localisation of a gene implicated in a severe speech and language disorder , 1997, Nature Genetics.

[32]  C. Francks,et al.  A full genome screen for autism with evidence for linkage to a region on chromosome 7q. International Molecular Genetic Study of Autism Consortium. , 1998, Human molecular genetics.

[33]  Courtney A. Harper,et al.  A genomic screen of autism: evidence for a multilocus etiology. , 1999, American journal of human genetics.

[34]  P. Tallal,et al.  Different origin of auditory and phonological processing problems in children with language impairment: evidence from a twin study. , 1999, Journal of speech, language, and hearing research : JSLHR.

[35]  J. Lamb,et al.  A quantitative-trait locus on chromosome 6p influences different aspects of developmental dyslexia. , 1999, American journal of human genetics.

[36]  H. Lubs,et al.  A new gene (DYX3) for dyslexia is located on chromosome 2 , 1999, Journal of medical genetics.

[37]  L. Cardon,et al.  Quantitative-trait locus for specific language and reading deficits on chromosome 6p. , 1999, American journal of human genetics.

[38]  Christopher Gillberg,et al.  Genome-Wide Scan for Autism Susceptibility Genes , 1999 .

[39]  A. Monaco,et al.  The SPCH1 region on human 7q31: genomic characterization of the critical interval and localization of translocations associated with speech and language disorder. , 2000, American journal of human genetics.

[40]  L Kruglyak,et al.  Exact multipoint quantitative-trait linkage analysis in pedigrees by variance components. , 2000, American journal of human genetics.

[41]  K Lange,et al.  A multipoint method for detecting genotyping errors and mutations in sibling-pair linkage data. , 2000, American journal of human genetics.

[42]  S. Folstein,et al.  Chromosome 7q: where autism meets language disorder? , 2000, American journal of human genetics.

[43]  G. Baird,et al.  Support for linkage of autism and specific language impairment to 7q3 from two chromosome rearrangements involving band 7q31. , 2000, American journal of medical genetics.

[44]  S. Scherer,et al.  Identification of a novel gene on chromosome 7q31 that is interrupted by a translocation breakpoint in an autistic individual. , 2000, American journal of human genetics.

[45]  U. Frith,et al.  Precursors of literacy delay among children at genetic risk of dyslexia. , 2000, Journal of child psychology and psychiatry, and allied disciplines.

[46]  A. Bailey,et al.  Autism: recent molecular genetic advances. , 2000, Human molecular genetics.

[47]  Susan E. Stothard,et al.  Is preschool language impairment a risk factor for dyslexia in adolescence? , 2000, Journal of child psychology and psychiatry, and allied disciplines.

[48]  Steven Pinker,et al.  Talk of genetics and vice versa , 2001, Nature.

[49]  A. Monaco,et al.  A forkhead-domain gene is mutated in a severe speech and language disorder , 2001, Nature.

[50]  A. Monaco,et al.  A novel forkhead-domain gene is mutated in a severe speech and language disorder , 2001 .

[51]  Susan E. Stothard,et al.  Educational attainments of school leavers with a preschool history of speech-language impairments. , 2001, International journal of language & communication disorders.

[52]  D. Geschwind,et al.  A genomewide screen for autism susceptibility loci. , 2001, American journal of human genetics.

[53]  P Tallal,et al.  Familial aggregation in specific language impairment. , 2001, Journal of speech, language, and hearing research : JSLHR.

[54]  P. Bolton,et al.  Screening for speech and language disorders: the reliability, validity and accuracy of the General Language Screen. , 2002, International journal of language & communication disorders.

[55]  Lon R. Cardon,et al.  Independent genome-wide scans identify a chromosome 18 quantitative-trait locus influencing dyslexia , 2002, Nature Genetics.