Protein energy landscapes determined by five-dimensional crystallography
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Marius Schmidt | Namrta Purwar | Jason Tenboer | V. Šrajer | R. Henning | H. Ihee | J. Tenboer | Marius Schmidt | Hyotcherl Ihee | Vukica Srajer | Robert Henning | S. Tripathi | Shailesh Tripathi | N. Purwar
[1] K. Moffat. Time-resolved macromolecular crystallography , 1996 .
[2] Maurice Goeldner,et al. Dynamic studies in biology : phototriggers, photoswitches and caged biomolecules , 2005 .
[3] G. Borgstahl,et al. 1.4 A structure of photoactive yellow protein, a cytosolic photoreceptor: unusual fold, active site, and chromophore. , 1995, Biochemistry.
[4] Y. Lecarpentier,et al. Femtosecond photolysis of CO-ligated protoheme and hemoproteins: appearance of deoxy species with a 350-fsec time constant. , 1983, Proceedings of the National Academy of Sciences of the United States of America.
[5] Georg Weidenspointner,et al. Time-resolved protein nanocrystallography using an X-ray free-electron laser , 2012, Optics express.
[6] K. Hellingwerf,et al. Photoinduced volume change and energy storage associated with the early transformations of the photoactive yellow protein from Ectothiorhodospira halophila. , 1995, Biophysical journal.
[7] D Bourgeois,et al. Photolysis of the Carbon Monoxide Complex of Myoglobin: Nanosecond Time-Resolved Crystallography , 1996, Science.
[8] Rienk van Grondelle,et al. Global and target analysis of time-resolved spectra. , 2004, Biochimica et biophysica acta.
[9] A. Authier. Acta Crystallographica Section A: Foundations of Crystallography , 2002 .
[10] G. G. Stokes. "J." , 1890, The New Yale Book of Quotations.
[11] P. J. Viccaro,et al. BioCARS: a synchrotron resource for time-resolved X-ray science. , 2011, Journal of synchrotron radiation.
[12] P. Giacomoni. Introduction to the special issue of The Journal of Photochemistry and Photobiology, B: Biology , 2001 .
[13] K. Achterhold,et al. A Physical Picture of Protein Dynamics and Conformational Changes , 2007, Journal of biological physics.
[14] S. Rani. Journal of Photochemistry and Photobiology A , 1996 .
[15] M. P. Heyn,et al. The transient accumulation of the signaling state of photoactive yellow protein is controlled by the external pH. , 2006, Biophysical journal.
[16] Gerrit Groenhof,et al. Photoactivation of the photoactive yellow protein: why photon absorption triggers a trans-to-cis Isomerization of the chromophore in the protein. , 2004, Journal of the American Chemical Society.
[17] W. Zinth,et al. Ultrashort laser pulses in biology and medicine , 2008 .
[18] T. Meyer,et al. Effect of salt and pH on the activation of photoactive yellow protein and gateway mutants Y98Q and Y98F. , 2005, Biochemistry.
[19] I. Prigogine. Chemical Kinetics and Dynamics , 2003, Annals of the New York Academy of Sciences.
[20] F. Young. Biochemistry , 1955, The Indian Medical Gazette.
[21] Marius Schmidt,et al. Ligand migration pathway and protein dynamics in myoglobin: a time-resolved crystallographic study on L29W MbCO. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[22] D. Schwarzenbach. Acta Crystallographica Section A: Foundations of Crystallography , 2005 .
[23] K. Moffat,et al. Optical studies of a bacterial photoreceptor protein, photoactive yellow protein, in single crystals. , 1995, Biochemistry.
[24] J. Tenboer,et al. Spectroscopic Studies of Model Photo-Receptors: Validation of a Nanosecond Time-Resolved Micro-Spectrophotometer Design Using Photoactive Yellow Protein and α-Phycoerythrocyanin , 2013, International journal of molecular sciences.
[25] P. Hänggi,et al. Reaction-rate theory: fifty years after Kramers , 1990 .
[26] V. Šrajer,et al. pH dependence of the photoactive yellow protein photocycle investigated by time-resolved crystallography. , 2012, Biophysical journal.
[27] Jae Hyuk Lee,et al. Volume-conserving trans-cis isomerization pathways in photoactive yellow protein visualized by picosecond X-ray crystallography , 2013, Nature chemistry.
[28] J. V. van Thor,et al. Pump-dump-probe and pump-repump-probe ultrafast spectroscopy resolves cross section of an early ground state intermediate and stimulated emission in the photoreactions of the Pr ground state of the cyanobacterial phytochrome Cph1. , 2012, The journal of physical chemistry. B.
[29] Marius Schmidt,et al. A structural pathway for signaling in the E46Q mutant of photoactive yellow protein. , 2005, Structure.
[30] Wayne A Hendrickson,et al. What is 'current opinion' in structural biology? , 2011, Current opinion in structural biology.
[31] H. Eyring. The Activated Complex in Chemical Reactions , 1935 .
[32] T. Pollard,et al. Annual review of biophysics and biophysical chemistry , 1985 .
[33] Wilfried Schildkamp,et al. Structure of a Protein Photocycle Intermediate by Millisecond Time-Resolved Crystallography , 1997, Science.
[34] K. Hellingwerf,et al. Influence of the crystalline state on photoinduced dynamics of photoactive yellow protein studied by ultraviolet-visible transient absorption spectroscopy. , 2006, Biophysical journal.
[35] P E Bourne,et al. The Protein Data Bank. , 2002, Nucleic acids research.
[36] H Frauenfelder,et al. Dynamics of ligand binding to myoglobin. , 1975, Biochemistry.
[37] K. Hellingwerf,et al. Protein folding thermodynamics applied to the photocycle of the photoactive yellow protein. , 1996, Biophysical journal.
[38] Jae Hyuk Lee,et al. Protein structural dynamics of photoactive yellow protein in solution revealed by pump-probe X-ray solution scattering. , 2012, Journal of the American Chemical Society.
[39] D. Saldin,et al. Extraction of Fast Changes in the Structure of a Disordered Ensemble of Photoexcited Biomolecules , 2013 .
[40] L. Rosenhead. Conduction of Heat in Solids , 1947, Nature.
[41] Keith Moffat,et al. Time-resolved structural studies at synchrotrons and X-ray free electron lasers: opportunities and challenges. , 2012, Current opinion in structural biology.
[42] E. B. Wilson. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES. , 1919, Science.
[43] Rebecca A. Ayers,et al. Addition at the molecular level: signal integration in designed Per-ARNT-Sim receptor proteins. , 2010, Journal of molecular biology.
[44] V. Šrajer,et al. The kinetic dose limit in room-temperature time-resolved macromolecular crystallography , 2012, Journal of synchrotron radiation.
[45] Themodynamic and transport properties of intermediate states of the photocyclic reaction of photoactive yellow protein. , 2002, Biochemistry.
[46] V. Šrajer,et al. Five-dimensional crystallography , 2010, Acta crystallographica. Section A, Foundations of crystallography.
[47] Ville R. I. Kaila,et al. Watching a signaling protein function in real time via 100-ps time-resolved Laue crystallography , 2012, Proceedings of the National Academy of Sciences.
[48] S. Lowen. The Biophysical Journal , 1960, Nature.
[49] 玉一 芦田,et al. Acta Crystallographica Section D (Biological Crystallography) の発刊に際して , 1993 .
[50] Marius Schmidt,et al. Protein-ligand interaction probed by time-resolved crystallography. , 2005, Methods in molecular biology.
[51] Marius Schmidt,et al. Application of singular value decomposition to the analysis of time-resolved macromolecular x-ray data. , 2003, Biophysical journal.
[52] Marius Schmidt,et al. Mix and Inject: Reaction Initiation by Diffusion for Time-Resolved Macromolecular Crystallography , 2013 .
[53] Z. Ren,et al. Protein kinetics: structures of intermediates and reaction mechanism from time-resolved x-ray data. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[54] K. Moffat,et al. Time-resolved biochemical crystallography: a mechanistic perspective. , 2001, Chemical reviews.
[55] K. Moffat,et al. Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[56] E. Kandel,et al. Proceedings of the National Academy of Sciences of the United States of America. Annual subject and author indexes. , 1990, Proceedings of the National Academy of Sciences of the United States of America.