BroadPeak: a novel algorithm for identifying broad peaks in diffuse ChIP-seq datasets
暂无分享,去创建一个
[1] Timothy J. Durham,et al. "Systematic" , 1966, Comput. J..
[2] Christian P. Robert,et al. Monte Carlo Statistical Methods , 2005, Springer Texts in Statistics.
[3] Timothy J. Durham,et al. Systematic analysis of chromatin state dynamics in nine human cell types , 2011, Nature.
[4] A. Raftery,et al. Bayesian analysis of a Poisson process with a change-point , 1986 .
[5] Keji Zhao,et al. domains barrier regions reveals demarcation of active and repressive Global analysis of the insulator binding protein CTCF in chromatin Material , 2008 .
[6] Clifford A. Meyer,et al. Model-based Analysis of ChIP-Seq (MACS) , 2008, Genome Biology.
[7] Walter L. Ruzzo,et al. A Linear Time Algorithm for Finding All Maximal Scoring Subsequences , 1999, ISMB.
[8] T. Laajala,et al. A practical comparison of methods for detecting transcription factor binding sites in ChIP-seq experiments , 2009, BMC Genomics.
[9] S. Karlin,et al. Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes. , 1990, Proceedings of the National Academy of Sciences of the United States of America.
[10] Dustin E. Schones,et al. High-Resolution Profiling of Histone Methylations in the Human Genome , 2007, Cell.
[11] S. Karlin,et al. Applications and statistics for multiple high-scoring segments in molecular sequences. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[12] P. Park. ChIP–seq: advantages and challenges of a maturing technology , 2009, Nature Reviews Genetics.
[13] Chen Zeng,et al. A clustering approach for identification of enriched domains from histone modification ChIP-Seq data , 2009, Bioinform..
[14] Andrew D. Smith,et al. Bioinformatics Applications Note Gene Expression Identifying Dispersed Epigenomic Domains from Chip-seq Data , 2022 .
[15] Michael Q. Zhang,et al. Combinatorial patterns of histone acetylations and methylations in the human genome , 2008, Nature Genetics.