Cloning and heterologous expression of a thermostable pectate lyase from Penicillium occitanis in Escherichia coli.

The entire pectate lyase cDNA (Pel1) of Penicillium occitanis was cloned from a cDNA bank and sequenced. The ORF exhibited a great homology to Penicillium marneffei and conservation of all features of fungal pectate lyases such as the barrel structure with "eight right-handed parallel β-helix" architecture. The structure modeling also showed the interesting resemblance with thermostable pectate lyases since several specific residues were also shared by Pel1 and these thermostable enzymes. Having shown that the enzyme retains its activity after endoH-mediated deglycosylation, we investigated its expression in Escherichia coli BL21 using the pET28-a vector. This expression was shown to be optimum when cells were induced at room temperature in 2YT medium rather than at 37 °C and LB medium. In such conditions, the recombinant protein was apparently produced more in soluble form than as inclusion bodies. The effect of NaCl concentration was investigated during the binding and elution steps of recombinant His-tagged enzyme on MagneHis Ni-particles. The purified enzyme was shown to retain its thermo-activity as well as a great tolerance to high concentration of NaCl and imidazole.

[1]  O. Mayans,et al.  Two crystal structures of pectin lyase A from Aspergillus reveal a pH driven conformational change and striking divergence in the substrate-binding clefts of pectin and pectate lyases. , 1997, Structure.

[2]  N. Carpita,et al.  Structural models of primary cell walls in flowering plants: consistency of molecular structure with the physical properties of the walls during growth. , 1993, The Plant journal : for cell and molecular biology.

[3]  S. Lee,et al.  High cell-density culture of Escherichia coli. , 1996, Trends in biotechnology.

[4]  M. M. Bradford A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. , 1976, Analytical biochemistry.

[5]  D. Wei,et al.  Effect of yeast extract on the expression of thioredoxin-human parathyroid hormone from recombinant Escherichia coli , 2006 .

[6]  D R Kashyap,et al.  Applications of pectinases in the commercial sector: a review. , 2001, Bioresource technology.

[7]  A. Gargouri,et al.  Cloning, genomic organisation and mRNA expression of a pectin lyase gene from a mutant strain of Penicillium occitanis. , 2007, Gene.

[8]  U. K. Laemmli,et al.  Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4 , 1970, Nature.

[9]  M. Mandels,et al.  The Production of Cellulases , 1969 .

[10]  A. Gargouri,et al.  Purification and biochemical characterization of a novel thermoactive fungal pectate lyase from Penicillium occitanis , 2011 .

[11]  F. Rombouts,et al.  Polysaccharides and food processing. , 1985, Carbohydrate research.

[12]  J. Benen,et al.  Characterization of Aspergillus niger pectate lyase A. , 2000, Biochemistry.

[13]  A. Gargouri,et al.  Constitutive over-expression of pectinases in Penicillium occitanis CT1 mutant is transcriptionally regulated , 2011, Biotechnology Letters.

[14]  Luis González-Candelas,et al.  Construction of a recombinant wine yeast strain expressing a fungal pectate lyase gene. , 1995, FEMS microbiology letters.

[15]  H. Sharma Enzymatic degradation of residual non-cellulosic polysaccharides present on dew-retted flax fibres , 1987, Applied Microbiology and Biotechnology.

[16]  Luis González-Candelas,et al.  Cloning of a new pectate lyase gene pelC from Fusarium solani f. sp. pisi (Nectria haematococca, mating type VI) and characterization of the gene product expressed in Pichia pastoris. , 1995, Archives of biochemistry and biophysics.

[17]  A. Gargouri,et al.  Hyperproduction of pectinase activities by a fully constitutive mutant (CT1) of Penicillium occitanis , 2002 .

[18]  J. Benen,et al.  Identification of amino acid residues critical for catalysis and stability in Aspergillus niger family 1 pectin lyase A. , 2003, The Biochemical journal.

[19]  J. Thorner,et al.  Intracellular targeting and structural conservation of a prohormone-processing endoprotease. , 1989, Science.

[20]  T. Sulea,et al.  Improvement of the Thermostability and Activity of a Pectate Lyase by Single Amino Acid Substitutions, Using a Strategy Based on Melting-Temperature-Guided Sequence Alignment , 2007, Applied and Environmental Microbiology.

[21]  F. Jurnak,et al.  Characterization and Implications of Ca2+Binding to Pectate Lyase C* , 2003, The Journal of Biological Chemistry.

[22]  N. Keen,et al.  The Role of Pectic Enzymes in Plant Pathogenesis , 1986 .

[23]  S. Colowick,et al.  Methods in Enzymology , Vol , 1966 .

[24]  G. Tiraby,et al.  Proteolytic events in the processing of secreted proteins in fungi. , 1991, Journal of biotechnology.

[25]  C. Dai,et al.  Expression, purification and characterization of pectate lyase A from Aspergillus nidulans in Escherichia coli , 2007 .