Comparative proteomics identifies Schlafen 5 (SLFN5) as a herpes simplex virus restriction factor that suppresses viral transcription

[1]  M. Weitzman,et al.  The HSV-1 ubiquitin ligase ICP0: Modifying the cellular proteome to promote infection , 2020, Virus research.

[2]  T. Alandijany.  Host Intrinsic and Innate Intracellular Immunity During Herpes Simplex Virus Type 1 (HSV-1) Infection , 2019, Front. Microbiol..

[3]  Martin Eisenacher,et al.  The PRIDE database and related tools and resources in 2019: improving support for quantification data , 2018, Nucleic Acids Res..

[4]  M. Llano,et al.  Schlafen 11 Restricts Flavivirus Replication , 2018, Journal of Virology.

[5]  J. Prado,et al.  Restriction Factors: From Intrinsic Viral Restriction to Shaping Cellular Immunity Against HIV-1 , 2018, Front. Immunol..

[6]  M. Weitzman,et al.  Ubiquitination at the interface of tumor viruses and DNA damage responses. , 2018, Current opinion in virology.

[7]  N. DeLuca,et al.  Temporal Viral Genome-Protein Interactions Define Distinct Stages of Productive Herpesviral Infection , 2018, mBio.

[8]  T. Kang,et al.  Structure of Schlafen13 reveals a new class of tRNA/rRNA- targeting RNase engaged in translational control , 2018, Nature Communications.

[9]  D. Knipe,et al.  Mechanisms of Host IFI16, PML, and Daxx Protein Restriction of Herpes Simplex Virus 1 Replication , 2018, Journal of Virology.

[10]  Meichao Zhang,et al.  The Schlafen family: complex roles in different cell types and virus replication , 2018, Cell biology international.

[11]  C. Boutell,et al.  Distinct temporal roles for the promyelocytic leukaemia (PML) protein in the sequential regulation of intracellular host immunity to HSV-1 infection , 2018, PLoS pathogens.

[12]  B. Cullen,et al.  The Epstein-Barr virus miR-BHRF1 microRNAs regulate viral gene expression in cis. , 2017, Virology.

[13]  R. González-Prieto,et al.  The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery , 2017, Nature Communications.

[14]  M. Luftig,et al.  c-Myc Represses Transcription of Epstein-Barr Virus Latent Membrane Protein 1 Early after Primary B Cell Infection , 2017, Journal of Virology.

[15]  Y. Choi,et al.  Schlafen 14 (SLFN14) is a novel antiviral factor involved in the control of viral replication. , 2017, Immunobiology.

[16]  Eui Tae Kim,et al.  Identifying Host Factors Associated with DNA Replicated During Virus Infection* , 2017, Molecular & Cellular Proteomics.

[17]  L. Platanias,et al.  Human SLFN5 is a Transcriptional Co-repressor of STAT1-Mediated Interferon Responses and Promotes the Malignant Phenotype in Glioblastoma , 2017, Oncogene.

[18]  J. Wilusz,et al.  Metabolic labeling and recovery of nascent RNA to accurately quantify mRNA stability. , 2017, Methods.

[19]  Eui Tae Kim,et al.  Time-resolved Global and Chromatin Proteomics during Herpes Simplex Virus Type 1 (HSV-1) Infection* , 2017, Molecular & Cellular Proteomics.

[20]  W. Press,et al.  Non-human Primate Schlafen11 Inhibits Production of Both Host and Viral Proteins , 2016, PLoS pathogens.

[21]  K. Nagata,et al.  The Role of Nuclear Antiviral Factors against Invading DNA Viruses: The Immediate Fate of Incoming Viral Genomes , 2016, Viruses.

[22]  I. Cristea,et al.  Diverse mechanisms evolved by DNA viruses to inhibit early host defenses , 2016, Critical reviews in biochemistry and molecular biology.

[23]  Dana Pascovici,et al.  Multiple testing corrections in quantitative proteomics: A useful but blunt tool , 2016, Proteomics.

[24]  Eui Tae Kim,et al.  An Intrinsically Disordered Region of the DNA Repair Protein Nbs1 Is a Species-Specific Barrier to Herpes Simplex Virus 1 in Primates. , 2016, Cell host & microbe.

[25]  Yi Zheng,et al.  Role of ND10 nuclear bodies in the chromatin repression of HSV-1 , 2016, Virology Journal.

[26]  S. Nisole,et al.  PML/TRIM19-Dependent Inhibition of Retroviral Reverse-Transcription by Daxx , 2015, PLoS pathogens.

[27]  M. Tatham,et al.  Analysis of the SUMO2 Proteome during HSV-1 Infection , 2015, PLoS pathogens.

[28]  A. Verma,et al.  Human Schlafen 5 (SLFN5) Is a Regulator of Motility and Invasiveness of Renal Cell Carcinoma Cells , 2015, Molecular and Cellular Biology.

[29]  V. Simon,et al.  Intrinsic host restrictions to HIV-1 and mechanisms of viral escape , 2015, Nature Immunology.

[30]  N. DeLuca,et al.  Selective Recruitment of Nuclear Factors to Productively Replicating Herpes Simplex Virus Genomes , 2015, PLoS pathogens.

[31]  H. Mostafa,et al.  HSV-1 ICP0: An E3 Ubiquitin Ligase That Counteracts Host Intrinsic and Innate Immunity , 2014, Cells.

[32]  M. Chew,et al.  Novel Roles of Cytoplasmic ICP0: Proteasome-Independent Functions of the RING Finger Are Required To Block Interferon-Stimulated Gene Production but Not To Promote Viral Replication , 2014, Journal of Virology.

[33]  H. Mostafa,et al.  Two Overlapping Regions within the N-Terminal Half of the Herpes Simplex Virus 1 E3 Ubiquitin Ligase ICP0 Facilitate the Degradation and Dissociation of PML and Dissociation of Sp100 from ND10 , 2013, Journal of Virology.

[34]  A. García-Sastre,et al.  Viral evasion mechanisms of early antiviral responses involving regulation of ubiquitin pathways , 2013, Trends in Microbiology.

[35]  L. Platanias,et al.  The schlafen family of proteins and their regulation by interferons. , 2013, Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research.

[36]  C. Boutell,et al.  Regulation of alphaherpesvirus infections by the ICP0 family of proteins. , 2013, The Journal of general virology.

[37]  R. Everett,et al.  Components of Promyelocytic Leukemia Nuclear Bodies (ND10) Act Cooperatively To Repress Herpesvirus Infection , 2012, Journal of Virology.

[38]  J. Hultquist,et al.  The Restriction Factors of Human Immunodeficiency Virus* , 2012, The Journal of Biological Chemistry.

[39]  N. DeLuca,et al.  Nuclear IFI16 induction of IRF-3 signaling during herpesviral infection and degradation of IFI16 by the viral ICP0 protein , 2012, Proceedings of the National Academy of Sciences.

[40]  M. Weitzman,et al.  Codon-usage-based inhibition of HIV protein synthesis by human schlafen 11 , 2012, Nature.

[41]  M. Malim,et al.  HIV Restriction Factors and Mechanisms of Evasion. , 2012, Cold Spring Harbor perspectives in medicine.

[42]  C. Lilley,et al.  Viral E3 ubiquitin ligase-mediated degradation of a cellular E3: viral mimicry of a cellular phosphorylation mark targets the RNF8 FHA domain. , 2012, Molecular cell.

[43]  D. Cortez,et al.  Monitoring the spatiotemporal dynamics of proteins at replication forks and in assembled chromatin using isolation of proteins on nascent DNA , 2012, Nature Protocols.

[44]  C. Boutell,et al.  A Viral Ubiquitin Ligase Has Substrate Preferential SUMO Targeted Ubiquitin Ligase Activity that Counteracts Intrinsic Antiviral Defence , 2011, PLoS pathogens.

[45]  C. Boutell,et al.  SUMO Pathway Dependent Recruitment of Cellular Repressors to Herpes Simplex Virus Type 1 Genomes , 2011, PLoS pathogens.

[46]  D. Cortez,et al.  Analysis of protein dynamics at active, stalled, and collapsed replication forks. , 2011, Genes & development.

[47]  C. Lilley,et al.  The Intrinsic Antiviral Defense to Incoming HSV-1 Genomes Includes Specific DNA Repair Proteins and Is Counteracted by the Viral Protein ICP0 , 2011, PLoS pathogens.

[48]  T. Stamminger,et al.  Intrinsic cellular defense mechanisms targeting human cytomegalovirus. , 2011, Virus research.

[49]  E. Casa-Esperón,et al.  From mammals to viruses: the Schlafen genes in developmental, proliferative and immune processes , 2011, Biomolecular concepts.

[50]  L. Platanias,et al.  Role of Interferon α (IFNα)-inducible Schlafen-5 in Regulation of Anchorage-independent Growth and Invasion of Malignant Melanoma Cells* , 2010, The Journal of Biological Chemistry.

[51]  P. Blanchette,et al.  Proteasome-Dependent Degradation of Daxx by the Viral E1B-55K Protein in Human Adenovirus-Infected Cells , 2010, Journal of Virology.

[52]  C. Lilley,et al.  A viral E3 ligase targets RNF8 and RNF168 to control histone ubiquitination and DNA damage responses , 2010, The EMBO journal.

[53]  R. Everett,et al.  Regulation of ICP0-Null Mutant Herpes Simplex Virus Type 1 Infection by ND10 Components ATRX and hDaxx , 2010, Journal of Virology.

[54]  R. Zimmer,et al.  High-resolution gene expression profiling for simultaneous kinetic parameter analysis of RNA synthesis and decay. , 2008, RNA.

[55]  Liang Zhao,et al.  Subcellular localization of the Schlafen protein family. , 2008, Biochemical and biophysical research communications.

[56]  D. Knipe,et al.  Chromatin control of herpes simplex virus lytic and latent infection , 2008, Nature Reviews Microbiology.

[57]  Joachim Selbig,et al.  pcaMethods - a bioconductor package providing PCA methods for incomplete data , 2007, Bioinform..

[58]  P. Lomonte,et al.  Centromeric protein CENP‐B proteasomal degradation induced by the viral protein ICP0 , 2007, FEBS letters.

[59]  S. Kaufmann,et al.  Modulation of T cell development and activation by novel members of the Schlafen (slfn) gene family harbouring an RNA helicase-like motif. , 2004, International immunology.

[60]  P. Pandolfi,et al.  Ubiquitin-dependent Degradation of p73 Is Inhibited by PML , 2004, The Journal of experimental medicine.

[61]  C. Boutell,et al.  The Herpes Simplex Virus Type 1 (HSV-1) Regulatory Protein ICP0 Interacts with and Ubiquitinates p53* , 2003, Journal of Biological Chemistry.

[62]  Pier Paolo Pandolfi,et al.  The Promyelocytic Leukemia Protein Protects p53 from Mdm2-mediated Inhibition and Degradation* , 2003, Journal of Biological Chemistry.

[63]  P. Bieniasz.  Restriction factors: a defense against retroviral infection. , 2003, Trends in microbiology.

[64]  W. Halford,et al.  ICP0, ICP4, or VP16 Expressed from Adenovirus Vectors Induces Reactivation of Latent Herpes Simplex Virus Type 1 in Primary Cultures of Latently Infected Trigeminal Ganglion Cells , 2001, Journal of Virology.

[65]  K. Sullivan,et al.  Degradation of Nucleosome-associated Centromeric Histone H3-like Protein CENP-A Induced by Herpes Simplex Virus Type 1 Protein ICP0* , 2001, The Journal of Biological Chemistry.

[66]  W. Earnshaw,et al.  Specific destruction of kinetochore protein CENP‐C and disruption of cell division by herpes simplex virus immediate‐early protein Vmw110 , 1999, The EMBO journal.

[67]  Mounira K Chelbi-Alix,et al.  Herpes virus induced proteasome-dependent degradation of the nuclear bodies-associated PML and Sp100 proteins , 1999, Oncogene.

[68]  R. Everett,et al.  Herpes Simplex Virus Type 1 Immediate-Early Protein Vmw110 Induces the Proteasome-Dependent Degradation of the Catalytic Subunit of DNA-Dependent Protein Kinase , 1999, Journal of Virology.

[69]  R. Everett,et al.  A viral activator of gene expression functions via the ubiquitin–proteasome pathway , 1998, The EMBO journal.

[70]  P. Freemont,et al.  The Disruption of ND10 during Herpes Simplex Virus Infection Correlates with the Vmw110- and Proteasome-Dependent Loss of Several PML Isoforms , 1998, Journal of Virology.

[71]  S. Silverstein,et al.  Mutational analysis of the herpes simplex virus type 1 ICP0 C3HC4 zinc ring finger reveals a requirement for ICP0 in the expression of the essential alpha27 gene , 1997, Journal of virology.

[72]  S. Lees-Miller,et al.  Attenuation of DNA-dependent protein kinase activity and its catalytic subunit by the herpes simplex virus type 1 transactivator ICP0 , 1996, Journal of virology.

[73]  P. Schaffer,et al.  Herpes simplex virus type 1 ICP0 regulates expression of immediate-early, early, and late genes in productively infected cells , 1992, Journal of virology.

[74]  R. Everett.  Construction and characterization of herpes simplex virus type 1 mutants with defined lesions in immediate early gene 1. , 1989, The Journal of general virology.

[75]  N. Stow,et al.  Isolation and characterization of a herpes simplex virus type 1 mutant containing a deletion within the gene encoding the immediate early polypeptide Vmw110. , 1986, The Journal of general virology.