Major Histocompatibility Complex: Polymorphism from Coevolution

There are many examples of pathogens adapting toward evasion of immune responses. Viruses, such as influenza, rapidly alter their genetic make-up, and each year there appear to be sufficient susceptible hosts that lack memory lymphocytes from previous influenza infections to give rise to a new epidemic. During human immunodeficiency virus (HIV) infection, such alterations occur at an even faster rate, enabling the virus to escape repeatedly from the immune response within a single host. Hosts, on the other hand, are selected for counteracting immune evasive strategies by pathogens. Since the generation time of hosts is typically much longer than that of pathogens, these host adaptations are expected to evolve much more slowly.

[1]  M. Nei,et al.  Allelic genealogy under overdominant and frequency-dependent selection and polymorphism of major histocompatibility complex loci. , 1990, Genetics.

[2]  Paulien Hogeweg,et al.  Evolutionary Consequences of Coevolving Targets , 1997, Evolutionary Computation.

[3]  A. Noest,et al.  How specific should immunological memory be? , 1999, Journal of immunology.

[4]  R. Slade,et al.  Overdominant vs. frequency-dependent selection at MHC loci. , 1992, Genetics.

[5]  J. Klein,et al.  Nucleotide sequences of chimpanzee MHC class I alleles: evidence for trans‐species mode of evolution. , 1988, The EMBO journal.

[6]  Paulien Hogeweg,et al.  Genetic Algorithms and Information Accumulation during the Evolution of Gene Regulation , 1989, ICGA.

[7]  M. Nei,et al.  Models of host-parasite interaction and MHC polymorphism. , 1992, Genetics.

[8]  M A Nowak,et al.  Antigenic diversity thresholds and the development of AIDS. , 1991, Science.

[9]  T. Ohta,et al.  Population Biology of Antigen Presentation by MHC Class I Molecules , 1996, Science.

[10]  W. Bodmer,et al.  Evolutionary Significance of the HL-A System , 1972, Nature.

[11]  M. Nei,et al.  Nucleotide substitution at major histocompatibility complex class II loci: evidence for overdominant selection. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[12]  J. Klein,et al.  The synonymous substitution rate of the major histocompatibility complex loci in primates. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[13]  R. Zinkernagel,et al.  Enhanced immunological surveillance in mice heterozygous at the H-2 gene complex , 1975, Nature.

[14]  N. Cox,et al.  Antigenic drift in influenza virus H3 hemagglutinin from 1968 to 1980: multiple evolutionary pathways and sequential amino acid changes at key antigenic sites , 1983, Journal of virology.

[15]  P. Parham,et al.  Diversity of class I HLA molecules: functional and evolutionary interactions with T cells. , 1989, Cold Spring Harbor symposia on quantitative biology.

[16]  Peter Parham,et al.  HLA-A and B polymorphisms predate the divergence of humans and chimpanzees , 1988, Nature.

[17]  C. Wills Maintenance of Multiallelic Polymorphism at the MHC Region , 1991, Immunological reviews.

[18]  P. Parham,et al.  Diversity and diversification of HLA-A,B,C alleles. , 1989, Journal of immunology.

[19]  The Chinese Human Genome Sequencing Consortium,et al.  Complete sequence and gene map of a human major histocompatibility complex , 1999 .

[20]  L. Buss,et al.  Histoincompatibility in vertebrates: the relict hypothesis. , 1985, Developmental and comparative immunology.

[21]  Gen Tamiya,et al.  Complete sequence and gene map of a human major histocompatibility complex , 1999 .

[22]  D. Green,et al.  A Genetic Herd‐Immunity Model for the Maintenance of MHC Polymorphism , 1995, Immunological reviews.

[23]  R. J. Boer THE EVOLUTION OF POLYMORPHIC COMPATIBILITY MOLECULES , 1995 .

[24]  D. Watkins,et al.  Major histocompatibility complex class I genes in primates: co‐evolution with pathogens , 1999, Immunological reviews.

[25]  A S Perelson,et al.  Variable efficacy of repeated annual influenza vaccination. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[26]  S Forrest,et al.  Genetic algorithms , 1996, CSUR.

[27]  Konrad Beck Coevolution: Mathematical analysis of host-parasite interactions , 1984, Journal of mathematical biology.

[28]  G. Snell The H-2 locus of the mouse: observations and speculations concerning its comparative genetics and its polymorphism. , 1968, Folia biologica.

[29]  John H. Holland,et al.  Adaptation in Natural and Artificial Systems: An Introductory Analysis with Applications to Biology, Control, and Artificial Intelligence , 1992 .

[30]  J. Goedert,et al.  HLA and HIV-1: heterozygote advantage and B*35-Cw*04 disadvantage. , 1999, Science.

[31]  J. Klein,et al.  Molecular Evolution of the Major Histocompatibility Complex , 2011, NATO ASI Series.

[32]  M. Nei,et al.  Pattern of nucleotide substitution at major histocompatibility complex class I loci reveals overdominant selection , 1988, Nature.