Automatic Lameness Detection in a Milking Robot : Instrumentation, measurement software, algorithms for data analysis and a neural network model

The aim of this thesis is to develop a fully automatic lameness detection system that operates in a milking robot. The instrumentation, measurement software, algorithms for data analysis and a neural network model for lameness detection were developed. Automatic milking has become a common practice in dairy husbandry, and in the year 2006 about 4000 farms worldwide used over 6000 milking robots. There is a worldwide movement with the objective of fully automating every process from feeding to milking. Increase in automation is a consequence of increasing farm sizes, the demand for more efficient production and the growth of labour costs. As the level of automation increases, the time that the cattle keeper uses for monitoring animals often decreases. This has created a need for systems for automatically monitoring the health of farm animals. The popularity of milking robots also offers a new and unique possibility to monitor animals in a single confined space up to four times daily. Lameness is a crucial welfare issue in the modern dairy industry. Limb disorders cause serious welfare, health and economic problems especially in loose housing of cattle. Lameness causes losses in milk production and leads to early culling of animals. These costs could be reduced with early identification and treatment. At present, only a few methods for automatically detecting lameness have been developed, and the most common methods used for lameness detection and assessment are various visual locomotion scoring systems. The problem with locomotion scoring is that it needs experience to be conducted properly, it is labour intensive as an on-farm method and the results are subjective. A four balance system for measuring the leg load distribution of dairy cows during milking in order to detect lameness was developed and set up in the University of Helsinki Research farm Suitia. The leg weights of 73 cows were successfully recorded during almost 10,000 robotic milkings over a period of 5 months. The cows were locomotion scored weekly, and the lame cows were inspected clinically for hoof lesions. Unsuccessful measurements, caused by cows standing outside the balances, were removed from the data with a special algorithm, and the mean leg loads and the number of kicks during milking was calculated. In order to develop an intelligent system to automatically detect lameness cases, a model was needed. A probabilistic neural network (PNN) classifier model was chosen for the task. The data was divided in two parts and 5,074 measurements from 37 cows were used to train the model. The operation of the model was evaluated for its ability to detect lameness in the validating dataset, which had 4,868 measurements from 36 cows. The model was able to classify 96% of the measurements correctly as sound or lame cows, and 100% of the lameness cases in the validation data were identified. The number of measurements causing false alarms was 1.1%. The developed model has the potential to be used for on-farm decision support and can be used in a real-time lameness monitoring system.

[1]  C. Risco,et al.  Effect of lameness on ovarian activity in postpartum holstein cows. , 2004, Journal of dairy science.

[2]  H. Whay,et al.  Associations between locomotion, claw lesions and nociceptive threshold in dairy heifers during the peri-partum period. , 1997, Veterinary journal.

[3]  F. Lescourret,et al.  Environmental factors associated with lameness in dairy cattle , 1989 .

[4]  U. Tasch,et al.  The development of a SoftSeparator for a lameness diagnostic system , 2004 .

[5]  J. Shearer,et al.  Effect of lameness on milk yield in dairy cows. , 2002, Journal of the American Veterinary Medical Association.

[6]  N. S. Visen,et al.  AE—Automation and Emerging Technologies: Evaluation of Neural Network Architectures for Cereal Grain Classification using Morphological Features , 2001 .

[7]  L. Warnick,et al.  Effect of lameness on culling in dairy cows. , 2004, Journal of dairy science.

[8]  Donald F. Specht,et al.  Probabilistic neural networks , 1990, Neural Networks.

[9]  A. Lefcourt,et al.  Radiotelemetry measurement of body temperatures of feedlot steers during summer. , 1996, Journal of animal science.

[10]  C. Bergsten,et al.  A Photometric Method for Recording Hoof Diseases in Cattle, with Special Reference to Haemorrhages of the Sole , 1993, Acta Veterinaria Scandinavica.

[11]  R. M. Dyer,et al.  THE DEVELOPMENT OF AN OBJECTIVE LAMENESS SCORING SYSTEM FOR DAIRY HERDS: PILOT STUDY , 2002 .

[12]  J. Hernández,et al.  Effect of lameness on the calving-to-conception interval in dairy cows. , 2001, Journal of the American Veterinary Medical Association.

[13]  Roger A. Eigenberg,et al.  Development of a new respiration rate monitor for cattle. , 2000 .

[14]  N. Cook,et al.  Investigation Strategies for Laminitis Problem Herds , 2004 .

[15]  D. Weary,et al.  Hoof discomfort changes how dairy cattle distribute their body weight. , 2006, Journal of dairy science.

[16]  A. Lefcourt,et al.  Radiotelemetric measurement of body temperature in feedlot steers during winter. , 1998, Journal of animal science.

[17]  Y T Gröhn,et al.  The effect of lameness on milk production in dairy cows. , 2001, Journal of dairy science.

[18]  F. Manson,et al.  Epidemiology of lameness in dairy cattle: description and analysis of foot lesions , 1996, Veterinary Record.

[19]  Dimitrios Moshou,et al.  Neural recognition systems for swine cough , 2001 .

[20]  Absence of Heart-Rate Effects in Rabbits During Low-Level Microwave Irradiation , 1971 .

[21]  J. A. Lines,et al.  A review of livestock monitoring and the need for integrated systems , 1997 .

[22]  A. Lefcourt,et al.  A noninvasive radiotelemetry system to monitor heart rate for assessing stress responses of bovines. , 1999, Journal of dairy science.

[23]  Jean-Marie Aerts,et al.  AP—Animal Production Technology: Recognition System for Pig Cough based on Probabilistic Neural Networks , 2001 .

[24]  P. H. Robinson,et al.  Impact of lameness on behavior and productivity of lactating Holstein cows , 2003 .

[25]  Derek R. Magee,et al.  Detecting lameness using 'Re-sampling Condensation' and 'multi-stream cyclic hidden Markov models' , 2002, Image Vis. Comput..

[26]  Anders Ringgaard Kristensen,et al.  A model for monitoring the condition of young pigs by their drinking behaviour , 2005 .

[27]  D. Whitaker,et al.  Incidence of lameness in dairy cows , 1983, Veterinary Record.

[28]  E. Maltz,et al.  Herd management for robot milking , 1997 .

[29]  J. Vermunt "Subclinical" laminitis in dairy cattle. , 1992, New Zealand veterinary journal.

[30]  W A Weijs,et al.  Frictional forces required for unrestrained locomotion in dairy cattle. , 2005, Journal of dairy science.

[31]  M.E.R. Paice,et al.  An adaptive data logging system for animal power studies , 1989 .

[32]  F. Manson,et al.  The influence of concentrate amount on locomotion and clinical lameness in dairy cattle , 1988 .

[33]  Jukka Ahokas,et al.  Evaluation of instrumentation for cow positioning and tracking indoors , 2007 .

[34]  S. Schoenig,et al.  Ingestible Pill for Heart Rate and Core Temperature Measurement in Cattle , 2006, 2006 International Conference of the IEEE Engineering in Medicine and Biology Society.

[35]  A. Lefcourt,et al.  Comparison of models to identify lame cows based on gait and lesion scores, and limb movement variables. , 2006, Journal of dairy science.

[36]  Christopher J. S. de Silva,et al.  Entropy maximization networks: an application to breast cancer prognosis , 1996, IEEE Trans. Neural Networks.

[37]  D. F. Specht,et al.  Probabilistic neural networks for classification, mapping, or associative memory , 1988, IEEE 1988 International Conference on Neural Networks.

[38]  D. Cveticanin New Approach to the Dynamic Weighing of Livestock , 2003 .

[39]  J. Hultgren Observational and Experimental Studies of the Influence of Housing Factors on the Behaviour and Health of Dairy Cows , 2001 .

[40]  R. D. Tillett,et al.  Using model-based image processing to track animal movements , 1997 .

[41]  Lucila Ohno-Machado,et al.  The use of receiver operating characteristic curves in biomedical informatics , 2005, J. Biomed. Informatics.

[42]  W A Weijs,et al.  The effect of preventive trimming on weight bearing and force balance on the claws of dairy cattle. , 2004, Journal of dairy science.

[43]  D. Sprecher,et al.  A lameness scoring system that uses posture and gait to predict dairy cattle reproductive performance. , 1997, Theriogenology.

[44]  K. Rutherford Assessing Pain in Animals , 2002, Animal Welfare.

[45]  Xin Jin,et al.  Classification of freeway traffic patterns for incident detection using constructive probabilistic neural networks , 2001, IEEE Trans. Neural Networks.

[46]  A. Lefcourt,et al.  Circadian and ultradian rhythms of body temperature and peripheral concentrations of insulin and nitrogen in lactating dairy cows. , 1999, Domestic animal endocrinology.

[47]  C. McCulloch,et al.  Effects of milk fever, ketosis, and lameness on milk yield in dairy cows. , 1999, Journal of dairy science.

[48]  R. Huirne,et al.  Economic losses due to clinical lameness in dairy cattle , 1997 .

[49]  R. M. Dyer,et al.  A System for Identifying Lameness in Dairy Cattle , 2002 .

[50]  M. Endres,et al.  Prevalence of lameness in high-producing holstein cows housed in freestall barns in Minnesota. , 2006, Journal of dairy science.

[51]  Ola Nafstad,et al.  Bovine claw and limb disorders related to culling and carcass characteristics , 2007 .

[52]  Guowang Xu,et al.  Application of probabilistic neural network in the clinical diagnosis of cancers based on clinical chemistry data , 2002 .

[53]  J. Krieter,et al.  Risk factors influencing lameness and claw disorders in dairy cows , 2005 .

[54]  P. J. Kettlewell,et al.  An implantable radio-telemetry system for remote monitoring of heart rate and deep body temperature in poultry , 1997 .

[55]  E. El-Darzi,et al.  Statistical Comparison of a Probabilistic Neural Network Approach in Hepatic Cancer Diagnosis , 2005, EUROCON 2005 - The International Conference on "Computer as a Tool".

[56]  D J Sanderson,et al.  Effects of milking on dairy cow gait. , 2006, Journal of dairy science.

[57]  J. Rodenburg,et al.  Automatic milking: State of the art in Europe and North America , 2004 .

[58]  Irenilza de Alencar Nääs,et al.  Prediction of the Occurrence of Lameness in Dairy Cows using a Fuzzy-Logic Based Expert System. - Part I , 2005 .

[59]  D. Berckmans,et al.  Automatic On-line Monitoring of animal Health and welfare by Precision livestock farming , 2009 .

[60]  D. Weary,et al.  Hoof pathologies influence kinematic measures of dairy cow gait. , 2005, Journal of dairy science.

[61]  Henk Hogeveen,et al.  The body weight of the dairy cow I. Introductory study into body weight changes in dairy cows as a management aid , 1997 .

[62]  Anders Ringgaard Kristensen,et al.  Modelling the drinking patterns of young pigs using a state space model , 2005 .

[63]  Trygve Eftestøl,et al.  A probabilistic neural network as the predictive classifier of out-of-hospital defibrillation outcomes. , 2005, Resuscitation.

[64]  S. Deutsch An Implanted Telemetry Unit for Ambulatory Animals , 1975, IEEE Trans. Commun..

[65]  Jan Hultgren,et al.  Prevalence and interrelationships of hoof lesions and lameness in Swedish dairy cows. , 2002, Preventive veterinary medicine.

[66]  T. Brown-Brandl,et al.  Development of a respiration rate monitor for swine. , 2000 .

[67]  D. Weary,et al.  Effect of hoof pathologies on subjective assessments of dairy cow gait. , 2006, Journal of dairy science.

[68]  H. Dobson,et al.  Associations between types of lameness and fertility , 1989, Veterinary Record.

[69]  G. Regula,et al.  Using a Herd Health Monitoring System in the Assessment of Welfare , 2001 .

[70]  J. Hanley,et al.  The meaning and use of the area under a receiver operating characteristic (ROC) curve. , 1982, Radiology.

[71]  C. Winckler,et al.  The Reliability and Repeatability of a Lameness Scoring System for Use as an Indicator of Welfare in Dairy Cattle , 2001 .

[72]  L. Green,et al.  The impact of clinical lameness on the milk yield of dairy cows. , 2002, Journal of dairy science.

[73]  F. Manson,et al.  Incidence and prevalence of lameness in dairy cattle , 1996, Veterinary Record.

[74]  Tine Rousing,et al.  Stepping and kicking behaviour during milking in relation to response in human–animal interaction test and clinical health in loose housed dairy cows , 2004 .

[75]  L. Green,et al.  Assessment of the welfare of dairy caftle using animal-based measurements: direct observations and investigation of farm records , 2003, Veterinary Record.

[76]  J. Rushen,et al.  Validation of two measures of lameness in dairy cows , 2007 .

[77]  Scott T. Willard,et al.  THERMOREGULATORY RESPONSES ASSOCIATED WITH LYING AND STANDING IN HEAT-STRESSED DAIRY COWS , 2005 .

[78]  Noel D.G. White,et al.  AE—Automation and Emerging Technologies: Specialist Neural Networks for Cereal Grain Classification , 2002 .