MSTools—Web based application for visualization and presentation of HXMS data

[1]  M. Emmett,et al.  Automated data reduction for hydrogen/deuterium exchange experiments, enabled by high-resolution fourier transform ion cyclotron resonance mass spectrometry , 2010, Journal of the American Society for Mass Spectrometry.

[2]  Daniel Gillet,et al.  Accessibility changes within diphtheria toxin T domain when in the functional molten globule state, as determined using hydrogen/deuterium exchange measurements , 2010, The FEBS journal.

[3]  Martial Rey,et al.  Recombinant immobilized rhizopuspepsin as a new tool for protein digestion in hydrogen/deuterium exchange mass spectrometry. , 2009, Rapid communications in mass spectrometry : RCM.

[4]  Igor A Kaltashov,et al.  H/D exchange and mass spectrometry in the studies of protein conformation and dynamics: is there a need for a top-down approach? , 2009, Analytical chemistry.

[5]  John R. Engen,et al.  Analysis of protein conformation and dynamics by hydrogen/deuterium exchange MS. , 2009, Analytical chemistry.

[6]  David C. Schriemer,et al.  Hydra: software for tailored processing of H/D exchange data from MS or tandem MS analyses , 2009, BMC Bioinformatics.

[7]  M. Easterling,et al.  Protein conformations can be probed in top-down HDX MS experiments utilizing electron transfer dissociation of protein ions without hydrogen scrambling , 2009, Journal of the American Society for Mass Spectrometry.

[8]  Scott A. Busby,et al.  HD desktop: An integrated platform for the analysis and visualization of H/D exchange data , 2009, Journal of the American Society for Mass Spectrometry.

[9]  P. Man,et al.  Conformational changes in p47phox upon activation highlighted by mass spectrometry coupled to hydrogen/deuterium exchange and limited proteolysis , 2009, FEBS letters.

[10]  Ole N Jensen,et al.  Electron transfer dissociation facilitates the measurement of deuterium incorporation into selectively labeled peptides with single residue resolution. , 2008, Journal of the American Chemical Society.

[11]  M. Emmett,et al.  Enhanced digestion efficiency, peptide ionization efficiency, and sequence resolution for protein hydrogen/deuterium exchange monitored by Fourier transform ion cyclotron resonance mass spectrometry. , 2008, Analytical Chemistry.

[12]  Pornpat Nikamanon,et al.  "TOF2H": A precision toolbox for rapid, high density/high coverage hydrogen-deuterium exchange mass spectrometry via an LC-MALDI approach, covering the data pipeline from spectral acquisition to HDX rate analysis , 2008, BMC Bioinformatics.

[13]  C. Borchers,et al.  Electron capture dissociation of electrosprayed protein ions for spatially resolved hydrogen exchange measurements. , 2008, Journal of the American Chemical Society.

[14]  Kasper D Rand,et al.  Electron capture dissociation proceeds with a low degree of intramolecular migration of peptide amide hydrogens. , 2008, Journal of the American Chemical Society.

[15]  P. Man,et al.  Defining the interacting regions between apomyoglobin and lipid membrane by hydrogen/deuterium exchange coupled to mass spectrometry. , 2007, Journal of molecular biology.

[16]  J. R. Engen,et al.  Semi-automated data processing of hydrogen exchange mass spectra using HX-Express , 2006, Journal of the American Society for Mass Spectrometry.

[17]  P. Gottlieb,et al.  Interaction of packaging motor with the polymerase complex of dsRNA bacteriophage. , 2006, Virology.

[18]  S. Brier,et al.  Molecular dissection of the inhibitor binding pocket of mitotic kinesin Eg5 reveals mutants that confer resistance to antimitotic agents. , 2006, Journal of molecular biology.

[19]  L. T. Ten Eyck,et al.  Automated extraction of backbone deuteration levels from amide H/2H mass spectrometry experiments , 2006, Protein science : a publication of the Protein Society.

[20]  Scott A. Busby,et al.  Probing protein ligand interactions by automated hydrogen/deuterium exchange mass spectrometry. , 2006, Analytical chemistry.

[21]  T. Wales,et al.  Hydrogen exchange mass spectrometry for the analysis of protein dynamics. , 2006, Mass spectrometry reviews.

[22]  I. Kaltashov,et al.  Structural and dynamic characteristics of a partially folded state of ubiquitin revealed by hydrogen exchange mass spectrometry. , 2005, Biochemistry.

[23]  J. M. Beals,et al.  IL-1β Epitope Mapping Using Site-Directed Mutagenesis and Hydrogen−Deuterium Exchange Mass Spectrometry Analysis , 2005 .

[24]  P. Prevelige,et al.  High-sensitivity mass spectrometry for imaging subunit interactions: hydrogen/deuterium exchange. , 2004, Current opinion in structural biology.

[25]  E. Forest,et al.  Use of different proteases working in acidic conditions to improve sequence coverage and resolution in hydrogen/deuterium exchange of large proteins. , 2003, Rapid communications in mass spectrometry : RCM.

[26]  Magnus Palmblad,et al.  Automatic analysis of hydrogen/deuterium exchange mass spectra of peptides and proteins using calculations of isotopic distributions , 2001, Journal of the American Society for Mass Spectrometry.

[27]  L. Lane,et al.  Detecting structural changes in viral capsids by hydrogen exchange and mass spectrometry , 2001, Protein science : a publication of the Protein Society.

[28]  Virgil L. Woods,et al.  High resolution, high‐throughput amide deuterium exchange‐mass spectrometry (DXMS) determination of protein binding site structure and dynamics: Utility in pharmaceutical design , 2001, Journal of cellular biochemistry. Supplement.

[29]  Zhongqi Zhang,et al.  A universal algorithm for fast and automated charge state deconvolution of electrospray mass-to-charge ratio spectra , 1998, Journal of the American Society for Mass Spectrometry.

[30]  Zhongqi Zhang,et al.  Determination of amide hydrogen exchange by mass spectrometry: A new tool for protein structure elucidation , 1993, Protein science : a publication of the Protein Society.