Structural profile matrices for predicting structural properties of proteins.
暂无分享,去创建一个
[1] Robert D. Finn,et al. The Pfam protein families database: towards a more sustainable future , 2015, Nucleic Acids Res..
[2] Sean R Eddy,et al. Where did the BLOSUM62 alignment score matrix come from? , 2004, Nature Biotechnology.
[3] Zafer Aydin,et al. Template Scoring Methods for Protein Torsion Angle Prediction , 2015, BIOSTEC.
[4] Jeff A. Bilmes,et al. Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure , 2011, BMC Bioinformatics.
[5] Zafer Aydin,et al. Developing structural profile matrices for protein secondary structure and solvent accessibility prediction , 2019, Bioinform..
[6] S. Henikoff,et al. Amino acid substitution matrices from protein blocks. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[7] Geoffrey J. Barton,et al. JPred : a consensus secondary structure prediction server , 1999 .
[8] Zafer Aydin,et al. Constructing Structural Profiles for Protein Torsion Angle Prediction , 2015, BIOINFORMATICS.
[9] Yang Zhang,et al. The I-TASSER Suite: protein structure and function prediction , 2014, Nature Methods.
[10] Portland Press Ltd. IUPAC-IUB Joint Commission on Biochemical Nomenclature (JCBN). Nomenclature and symbolism for amino acids and peptides. Recommendations 1983 , 1984 .
[11] Thomas L. Madden,et al. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.
[12] Sitao Wu,et al. LOMETS: A local meta-threading-server for protein structure prediction , 2007, Nucleic acids research.
[13] A. Biegert,et al. HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment , 2011, Nature Methods.
[14] Brian Kuhlman,et al. Advances in protein structure prediction and design , 2019, Nature Reviews Molecular Cell Biology.
[15] Amos Bairoch,et al. PROSITE: A Documented Database Using Patterns and Profiles as Motif Descriptors , 2002, Briefings Bioinform..
[16] Nadia Essoussi,et al. Data mining techniques to predict protein secondary structures , 2013, 2013 5th International Conference on Modeling, Simulation and Applied Optimization (ICMSAO).
[17] Marc A. Martí-Renom,et al. EVA: evaluation of protein structure prediction servers , 2003, Nucleic Acids Res..
[18] Sitao Wu,et al. MUSTER: Improving protein sequence profile–profile alignments by using multiple sources of structure information , 2008, Proteins.
[19] Pierre Baldi,et al. SSpro/ACCpro 5: almost perfect prediction of protein secondary structure and relative solvent accessibility using profiles, machine learning and structural similarity , 2014, Bioinform..
[20] Yang Zhang,et al. A comparative assessment and analysis of 20 representative sequence alignment methods for protein structure prediction , 2013, Scientific Reports.
[21] Guoli Wang,et al. PISCES: a protein sequence culling server , 2003, Bioinform..